RNA–Protein interactions for RNA: ENST00000488215.5

RERE-214, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-214ENST00000488215 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
RERE-214ENST00000488215 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 PHF14O94880 888 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
RERE-214ENST00000488215 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
RERE-214ENST00000488215 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
RERE-214ENST00000488215 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
RERE-214ENST00000488215 ITPK1Q13572 414 aa13.17□□□□□ -0.3
RERE-214ENST00000488215 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
RERE-214ENST00000488215 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
RERE-214ENST00000488215 MRC1P22897 1456 aa13.16□□□□□ -0.3
RERE-214ENST00000488215 TJP1Q07157 1748 aa13.16□□□□□ -0.3
RERE-214ENST00000488215 GNPATO15228 680 aa13.16□□□□□ -0.3
RERE-214ENST00000488215 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
RERE-214ENST00000488215 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
RERE-214ENST00000488215 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
RERE-214ENST00000488215 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
RERE-214ENST00000488215 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
RERE-214ENST00000488215 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
RERE-214ENST00000488215 CICQ96RK0 1608 aaPredicted RBP13.14□□□□□ -0.31
RERE-214ENST00000488215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
RERE-214ENST00000488215 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
RERE-214ENST00000488215 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
RERE-214ENST00000488215 NFATC2IPQ8NCF5 419 aa13.14□□□□□ -0.31
RERE-214ENST00000488215 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
RERE-214ENST00000488215 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
RERE-214ENST00000488215 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
RERE-214ENST00000488215 SSFA2P28290 1259 aa13.13□□□□□ -0.31
RERE-214ENST00000488215 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
RERE-214ENST00000488215 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
RERE-214ENST00000488215 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
RERE-214ENST00000488215 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
RERE-214ENST00000488215 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
RERE-214ENST00000488215 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
RERE-214ENST00000488215 UBR2Q8IWV8 1755 aa13.1□□□□□ -0.31
RERE-214ENST00000488215 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
RERE-214ENST00000488215 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
RERE-214ENST00000488215 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
RERE-214ENST00000488215 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
RERE-214ENST00000488215 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
RERE-214ENST00000488215 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
RERE-214ENST00000488215 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
RERE-214ENST00000488215 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
RERE-214ENST00000488215 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
RERE-214ENST00000488215 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
RERE-214ENST00000488215 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
RERE-214ENST00000488215 YY1P25490 414 aa13.08□□□□□ -0.32
RERE-214ENST00000488215 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
RERE-214ENST00000488215 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
RERE-214ENST00000488215 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
RERE-214ENST00000488215 TEFQ10587 303 aa13.07□□□□□ -0.32
RERE-214ENST00000488215 GPR162Q16538 588 aa13.06□□□□□ -0.32
RERE-214ENST00000488215 TRAPPC3LQ5T215 181 aa13.06□□□□□ -0.32
RERE-214ENST00000488215 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
RERE-214ENST00000488215 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
RERE-214ENST00000488215 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
RERE-214ENST00000488215 ADRA2BP18089 450 aa13.05□□□□□ -0.32
RERE-214ENST00000488215 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
RERE-214ENST00000488215 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
RERE-214ENST00000488215 RFC4P35249 363 aa13.04□□□□□ -0.32
RERE-214ENST00000488215 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
RERE-214ENST00000488215 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
RERE-214ENST00000488215 CHD4Q14839 1912 aa13.03□□□□□ -0.32
RERE-214ENST00000488215 MMP10P09238 476 aa13.03□□□□□ -0.32
RERE-214ENST00000488215 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
RERE-214ENST00000488215 CCDC87Q9NVE4 849 aa13.03□□□□□ -0.32
RERE-214ENST00000488215 DLG5Q8TDM6 1919 aa13.02□□□□□ -0.32
RERE-214ENST00000488215 FCHSD2O94868 740 aa13.02□□□□□ -0.33
RERE-214ENST00000488215 NEFMP07197 916 aa13.02□□□□□ -0.33
RERE-214ENST00000488215 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
RERE-214ENST00000488215 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
RERE-214ENST00000488215 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
RERE-214ENST00000488215 COL15A1P39059 1388 aa13.02□□□□□ -0.33
RERE-214ENST00000488215 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
RERE-214ENST00000488215 GYS1P13807 737 aa13.01□□□□□ -0.33
RERE-214ENST00000488215 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
RERE-214ENST00000488215 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
RERE-214ENST00000488215 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
RERE-214ENST00000488215 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
RERE-214ENST00000488215 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
RERE-214ENST00000488215 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
RERE-214ENST00000488215 KIF13BQ9NQT8 1826 aa13.01□□□□□ -0.33
RERE-214ENST00000488215 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
RERE-214ENST00000488215 C10orf71Q711Q0 1435 aa13□□□□□ -0.33
RERE-214ENST00000488215 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
RERE-214ENST00000488215 BTBD11A6QL63 1104 aa13□□□□□ -0.33
RERE-214ENST00000488215 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
RERE-214ENST00000488215 ZNF790Q6PG37 636 aa13□□□□□ -0.33
RERE-214ENST00000488215 MCM10Q7L590 875 aa13□□□□□ -0.33
RERE-214ENST00000488215 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
RERE-214ENST00000488215 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
RERE-214ENST00000488215 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
RERE-214ENST00000488215 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
RERE-214ENST00000488215 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
RERE-214ENST00000488215 YBX3P16989 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
RERE-214ENST00000488215 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms