RNA–Protein interactions for RNA: ENST00000488033.5

HCLS1-209, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-209ENST00000488033 ITPK1Q13572 414 aa18.95■□□□□ 0.62
HCLS1-209ENST00000488033 C9orf131Q5VYM1 1079 aa18.95■□□□□ 0.62
HCLS1-209ENST00000488033 INSRP06213 1382 aa18.94■□□□□ 0.62
HCLS1-209ENST00000488033 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
HCLS1-209ENST00000488033 FYB1O15117 783 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 TMF1P82094 1093 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
HCLS1-209ENST00000488033 TRAPPC3LQ5T215 181 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 NLGN1Q8N2Q7 840 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 CCDC87Q9NVE4 849 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 ASAP1Q9ULH1 1129 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 PLEKHG2Q9H7P9 1386 aa18.93■□□□□ 0.62
HCLS1-209ENST00000488033 C10orf71Q711Q0 1435 aa18.92■□□□□ 0.62
HCLS1-209ENST00000488033 PKD1L3Q7Z443 1732 aa18.92■□□□□ 0.62
HCLS1-209ENST00000488033 SPG7Q9UQ90 795 aa18.92■□□□□ 0.62
HCLS1-209ENST00000488033 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
HCLS1-209ENST00000488033 FLT4P35916 1363 aa18.92■□□□□ 0.62
HCLS1-209ENST00000488033 RTCBQ9Y3I0 505 aaKnown RBP18.91■□□□□ 0.62
HCLS1-209ENST00000488033 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
HCLS1-209ENST00000488033 KCPQ6ZWJ8 1503 aa18.9■□□□□ 0.62
HCLS1-209ENST00000488033 RRAGCQ9HB90 399 aa18.9■□□□□ 0.62
HCLS1-209ENST00000488033 ARFGEF1Q9Y6D6 1849 aa18.89■□□□□ 0.61
HCLS1-209ENST00000488033 TESK2Q96S53 571 aa18.89■□□□□ 0.61
HCLS1-209ENST00000488033 PARP3Q9Y6F1 533 aa18.89■□□□□ 0.61
HCLS1-209ENST00000488033 ATG3Q9NT62 314 aa18.88■□□□□ 0.61
HCLS1-209ENST00000488033 RNF181Q9P0P0 153 aa18.88■□□□□ 0.61
HCLS1-209ENST00000488033 C4AP0C0L4 1744 aa18.88■□□□□ 0.61
HCLS1-209ENST00000488033 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
HCLS1-209ENST00000488033 KCNA3P22001 575 aa18.87■□□□□ 0.61
HCLS1-209ENST00000488033 KIF24Q5T7B8 1368 aa18.87■□□□□ 0.61
HCLS1-209ENST00000488033 ARHGEF1Q92888 912 aaKnown RBP18.87■□□□□ 0.61
HCLS1-209ENST00000488033 PIM2Q9P1W9 311 aa18.87■□□□□ 0.61
HCLS1-209ENST00000488033 RFC4P35249 363 aa18.86■□□□□ 0.61
HCLS1-209ENST00000488033 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
HCLS1-209ENST00000488033 SLC24A1O60721 1099 aa18.85■□□□□ 0.61
HCLS1-209ENST00000488033 GYS1P13807 737 aa18.85■□□□□ 0.61
HCLS1-209ENST00000488033 ADRA2BP18089 450 aa18.85■□□□□ 0.61
HCLS1-209ENST00000488033 DALRD3Q5D0E6 543 aaKnown RBP18.85■□□□□ 0.61
HCLS1-209ENST00000488033 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
HCLS1-209ENST00000488033 KIF20BQ96Q89 1820 aa18.84■□□□□ 0.61
HCLS1-209ENST00000488033 HSPA1AP0DMV8 641 aaKnown RBP18.84■□□□□ 0.61
HCLS1-209ENST00000488033 HSPA1BP0DMV9 641 aaKnown RBP18.84■□□□□ 0.61
HCLS1-209ENST00000488033 DCAF5Q96JK2 942 aa18.84■□□□□ 0.61
HCLS1-209ENST00000488033 RBM42Q9BTD8 480 aaKnown RBP18.84■□□□□ 0.61
HCLS1-209ENST00000488033 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
HCLS1-209ENST00000488033 TNRC6CQ9HCJ0 1690 aaKnown RBP18.84■□□□□ 0.61
HCLS1-209ENST00000488033 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.6
HCLS1-209ENST00000488033 PHKG2P15735 406 aa18.83■□□□□ 0.6
HCLS1-209ENST00000488033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.6
HCLS1-209ENST00000488033 SBF1O95248 1867 aa18.82■□□□□ 0.6
HCLS1-209ENST00000488033 RC3H1Q5TC82 1133 aaKnown RBP18.82■□□□□ 0.6
HCLS1-209ENST00000488033 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
HCLS1-209ENST00000488033 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
HCLS1-209ENST00000488033 SLC4A9Q96Q91 983 aa18.81■□□□□ 0.6
HCLS1-209ENST00000488033 KDRP35968 1356 aa18.81■□□□□ 0.6
HCLS1-209ENST00000488033 EYA1Q99502 592 aa18.8■□□□□ 0.6
HCLS1-209ENST00000488033 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
HCLS1-209ENST00000488033 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
HCLS1-209ENST00000488033 COL5A3P25940 1745 aaPredicted RBP18.78■□□□□ 0.6
HCLS1-209ENST00000488033 CHRNA5P30532 468 aa18.78■□□□□ 0.6
HCLS1-209ENST00000488033 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
HCLS1-209ENST00000488033 ZNF831Q5JPB2 1677 aa18.77■□□□□ 0.6
HCLS1-209ENST00000488033 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
HCLS1-209ENST00000488033 SRP68Q9UHB9 627 aaKnown RBP18.76■□□□□ 0.59
HCLS1-209ENST00000488033 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
HCLS1-209ENST00000488033 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
HCLS1-209ENST00000488033 RASSF7Q02833 373 aa18.75■□□□□ 0.59
HCLS1-209ENST00000488033 DDR1Q08345 913 aa18.75■□□□□ 0.59
HCLS1-209ENST00000488033 FKBP8Q14318 412 aa18.75■□□□□ 0.59
HCLS1-209ENST00000488033 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
HCLS1-209ENST00000488033 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
HCLS1-209ENST00000488033 USP42Q9H9J4 1324 aaKnown RBP18.72■□□□□ 0.59
HCLS1-209ENST00000488033 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
HCLS1-209ENST00000488033 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
HCLS1-209ENST00000488033 LMNB1P20700 586 aa18.71■□□□□ 0.59
HCLS1-209ENST00000488033 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
HCLS1-209ENST00000488033 CABP4P57796 275 aa18.71■□□□□ 0.59
HCLS1-209ENST00000488033 ANKRD26Q9UPS8 1709 aa18.71■□□□□ 0.59
HCLS1-209ENST00000488033 CCDC88AQ3V6T2 1871 aa18.7■□□□□ 0.58
HCLS1-209ENST00000488033 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
HCLS1-209ENST00000488033 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
HCLS1-209ENST00000488033 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
HCLS1-209ENST00000488033 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
HCLS1-209ENST00000488033 TM4SF1P30408 202 aa18.68■□□□□ 0.58
HCLS1-209ENST00000488033 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
HCLS1-209ENST00000488033 POLKQ9UBT6 870 aa18.67■□□□□ 0.58
HCLS1-209ENST00000488033 ZPR1O75312 459 aa18.66■□□□□ 0.58
HCLS1-209ENST00000488033 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
HCLS1-209ENST00000488033 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
HCLS1-209ENST00000488033 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
HCLS1-209ENST00000488033 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
HCLS1-209ENST00000488033 MKRN1Q9UHC7 482 aaKnown RBP18.65■□□□□ 0.58
HCLS1-209ENST00000488033 POTECB2RU33 542 aa18.64■□□□□ 0.57
HCLS1-209ENST00000488033 MTHFSP49914 203 aa18.64■□□□□ 0.57
HCLS1-209ENST00000488033 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
HCLS1-209ENST00000488033 TTLL6Q8N841 843 aa18.64■□□□□ 0.57
HCLS1-209ENST00000488033 AFDNP55196 1824 aaKnown RBP18.64■□□□□ 0.57
HCLS1-209ENST00000488033 NFATC2IPQ8NCF5 419 aa18.63■□□□□ 0.57
HCLS1-209ENST00000488033 CREBZFQ9NS37 354 aa18.63■□□□□ 0.57
HCLS1-209ENST00000488033 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms