RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PNMA1Q8ND90 353 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 RRAGCQ9HB90 399 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 HOXB4P17483 251 aaPredicted RBP6.38□□□□□ -1.39
HFM1-208ENST00000488023 NPM2Q86SE8 214 aaKnown RBP6.38□□□□□ -1.39
HFM1-208ENST00000488023 ZMYND15Q9H091 742 aa6.38□□□□□ -1.39
HFM1-208ENST00000488023 HMX1Q9NP08 348 aaPredicted RBP6.38□□□□□ -1.39
HFM1-208ENST00000488023 CYLDQ9NQC7 956 aa6.38□□□□□ -1.39
HFM1-208ENST00000488023 MAP2K3P46734 347 aa6.37□□□□□ -1.39
HFM1-208ENST00000488023 H7C1W4 665 aa6.36□□□□□ -1.39
HFM1-208ENST00000488023 ARTNQ5T4W7 220 aa6.36□□□□□ -1.39
HFM1-208ENST00000488023 SEPT12Q8IYM1 358 aa6.36□□□□□ -1.39
HFM1-208ENST00000488023 ARID3AQ99856 593 aa6.36□□□□□ -1.39
HFM1-208ENST00000488023 ZFP64Q9NPA5 681 aa6.36□□□□□ -1.39
HFM1-208ENST00000488023 ATP5J2-PTCD1G3V325 749 aa6.35□□□□□ -1.39
HFM1-208ENST00000488023 USP17L8P0C7I0 530 aa6.35□□□□□ -1.39
HFM1-208ENST00000488023 RFC5P40937 340 aa6.35□□□□□ -1.39
HFM1-208ENST00000488023 EDARADDQ8WWZ3 215 aa6.35□□□□□ -1.39
HFM1-208ENST00000488023 TRIM52Q96A61 297 aa6.35□□□□□ -1.39
HFM1-208ENST00000488023 GPC1P35052 558 aa6.34□□□□□ -1.39
HFM1-208ENST00000488023 TMEM259Q4ZIN3 620 aa6.34□□□□□ -1.39
HFM1-208ENST00000488023 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
HFM1-208ENST00000488023 KLRG1Q96E93 195 aa6.34□□□□□ -1.39
HFM1-208ENST00000488023 DYRK1BQ9Y463 629 aa6.34□□□□□ -1.39
HFM1-208ENST00000488023 MEN1O00255 615 aa6.33□□□□□ -1.4
HFM1-208ENST00000488023 C1orf115Q9H7X2 142 aa6.33□□□□□ -1.4
HFM1-208ENST00000488023 A0A1W2PRU2 124 aa6.33□□□□□ -1.4
HFM1-208ENST00000488023 GIGYF1O75420 1035 aaPredicted RBP6.33□□□□□ -1.4
HFM1-208ENST00000488023 GAS2L1Q99501 681 aaPredicted RBP6.33□□□□□ -1.4
HFM1-208ENST00000488023 GNB5O14775 395 aa6.32□□□□□ -1.4
HFM1-208ENST00000488023 POU4F2Q12837 409 aa6.32□□□□□ -1.4
HFM1-208ENST00000488023 RSPO4Q2I0M5 234 aaPredicted RBP6.31□□□□□ -1.4
HFM1-208ENST00000488023 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
HFM1-208ENST00000488023 GDF2Q9UK05 429 aaPredicted RBP6.31□□□□□ -1.4
HFM1-208ENST00000488023 PIK3R2O00459 728 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 CFHR5Q9BXR6 569 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 TRIM34Q9BYJ4 488 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 GRIP2Q9C0E4 1043 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 PCDHB9Q9Y5E1 797 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 ZBBXA8MT70 800 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 GATA4P43694 442 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 ERVK-9P63128 1117 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 SLC27A3Q5K4L6 730 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 NBPF10Q6P3W6 841 aaKnown RBP6.3□□□□□ -1.4
HFM1-208ENST00000488023 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
HFM1-208ENST00000488023 NUCKS1Q9H1E3 243 aaKnown RBP6.3□□□□□ -1.4
HFM1-208ENST00000488023 NKAPLQ5M9Q1 402 aa6.29□□□□□ -1.4
HFM1-208ENST00000488023 CCDC125Q86Z20 511 aa6.29□□□□□ -1.4
HFM1-208ENST00000488023 ARID3CA6NKF2 412 aa6.28□□□□□ -1.4
HFM1-208ENST00000488023 SPATA31C2B4DYI2 1134 aa6.28□□□□□ -1.4
HFM1-208ENST00000488023 THBS1P07996 1170 aa6.28□□□□□ -1.4
HFM1-208ENST00000488023 AMPD1P23109 780 aa6.28□□□□□ -1.4
HFM1-208ENST00000488023 GOLGA6L1Q8N7Z2 621 aa6.28□□□□□ -1.4
HFM1-208ENST00000488023 BANK1Q8NDB2 785 aa6.28□□□□□ -1.4
HFM1-208ENST00000488023 NOP53Q9NZM5 478 aaKnown RBP6.28□□□□□ -1.4
HFM1-208ENST00000488023 CLN3Q13286 438 aa6.27□□□□□ -1.41
HFM1-208ENST00000488023 WDR44Q5JSH3 913 aa6.27□□□□□ -1.41
HFM1-208ENST00000488023 TIMMDC1Q9NPL8 285 aa6.27□□□□□ -1.41
HFM1-208ENST00000488023 F11P03951 625 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 FBXO45P0C2W1 286 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 CYP2U1Q7Z449 544 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 BTBD6Q96KE9 485 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 WASLO00401 505 aaPredicted RBP6.26□□□□□ -1.41
HFM1-208ENST00000488023 SOCS7O14512 581 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 SCTRP47872 440 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 DGKGP49619 791 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 RNF20Q5VTR2 975 aa6.26□□□□□ -1.41
HFM1-208ENST00000488023 SLCO4C1Q6ZQN7 724 aa6.25□□□□□ -1.41
HFM1-208ENST00000488023 TAS1R3Q7RTX0 852 aa6.25□□□□□ -1.41
HFM1-208ENST00000488023 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
HFM1-208ENST00000488023 APBB1O00213 710 aa6.24□□□□□ -1.41
HFM1-208ENST00000488023 DYRK3O43781 588 aa6.24□□□□□ -1.41
HFM1-208ENST00000488023 TRAK2O60296 914 aa6.24□□□□□ -1.41
HFM1-208ENST00000488023 GJD4Q96KN9 370 aaPredicted RBP6.24□□□□□ -1.41
HFM1-208ENST00000488023 OSBPL3Q9H4L5 887 aa6.24□□□□□ -1.41
HFM1-208ENST00000488023 ARHGEF10LQ9HCE6 1279 aa6.24□□□□□ -1.41
HFM1-208ENST00000488023 C2CD2LO14523 706 aa6.23□□□□□ -1.41
HFM1-208ENST00000488023 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
HFM1-208ENST00000488023 GGA1Q9UJY5 639 aa6.23□□□□□ -1.41
HFM1-208ENST00000488023 PCDHB11Q9Y5F2 797 aa6.23□□□□□ -1.41
HFM1-208ENST00000488023 TPSG1Q9NRR2 321 aa6.23□□□□□ -1.41
HFM1-208ENST00000488023 PHF24Q9UPV7 400 aa6.23□□□□□ -1.41
HFM1-208ENST00000488023 EPXP11678 715 aa6.22□□□□□ -1.41
HFM1-208ENST00000488023 CENPCQ03188 943 aa6.21□□□□□ -1.42
HFM1-208ENST00000488023 NR1H3Q13133 447 aa6.21□□□□□ -1.42
HFM1-208ENST00000488023 UBAP2LQ14157 1087 aaKnown RBP6.21□□□□□ -1.42
HFM1-208ENST00000488023 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
HFM1-208ENST00000488023 ESF1Q9H501 851 aaKnown RBP6.21□□□□□ -1.42
HFM1-208ENST00000488023 GPAMQ9HCL2 828 aa6.21□□□□□ -1.42
HFM1-208ENST00000488023 RAB6BQ9NRW1 208 aa6.21□□□□□ -1.42
HFM1-208ENST00000488023 GNRH1P01148 92 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 IL2RAP01589 272 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 BMP4P12644 408 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 PHKA2P46019 1235 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 LRP8Q14114 963 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 MCM6Q14566 821 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 CNKSR1Q969H4 720 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 ESYT1Q9BSJ8 1104 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 COBLO75128 1261 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms