RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 XAGE2Q96GT9 111 aa9.34□□□□□ -0.91
BRCA1-217ENST00000487825 ETNK1Q9HBU6 452 aa9.34□□□□□ -0.91
BRCA1-217ENST00000487825 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
BRCA1-217ENST00000487825 SKIP12755 728 aa9.33□□□□□ -0.92
BRCA1-217ENST00000487825 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
BRCA1-217ENST00000487825 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-217ENST00000487825 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-217ENST00000487825 PHKA2P46019 1235 aa9.32□□□□□ -0.92
BRCA1-217ENST00000487825 KRT76Q01546 638 aa9.32□□□□□ -0.92
BRCA1-217ENST00000487825 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
BRCA1-217ENST00000487825 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
BRCA1-217ENST00000487825 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-217ENST00000487825 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-217ENST00000487825 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
BRCA1-217ENST00000487825 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
BRCA1-217ENST00000487825 SPATA31C2B4DYI2 1134 aa9.31□□□□□ -0.92
BRCA1-217ENST00000487825 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-217ENST00000487825 HDGFL1Q5TGJ6 251 aa9.31□□□□□ -0.92
BRCA1-217ENST00000487825 TMEM214Q6NUQ4 689 aaKnown RBP9.31□□□□□ -0.92
BRCA1-217ENST00000487825 TAS1R3Q7RTX0 852 aa9.31□□□□□ -0.92
BRCA1-217ENST00000487825 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
BRCA1-217ENST00000487825 DYRK1BQ9Y463 629 aa9.31□□□□□ -0.92
BRCA1-217ENST00000487825 HRH3Q9Y5N1 445 aa9.31□□□□□ -0.92
BRCA1-217ENST00000487825 RNFT1Q5M7Z0 435 aa9.3□□□□□ -0.92
BRCA1-217ENST00000487825 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-217ENST00000487825 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
BRCA1-217ENST00000487825 GTF2E1P29083 439 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-217ENST00000487825 SCNN1DP51172 638 aa9.29□□□□□ -0.92
BRCA1-217ENST00000487825 GDF10P55107 478 aa9.29□□□□□ -0.92
BRCA1-217ENST00000487825 TLR1Q15399 786 aa9.29□□□□□ -0.92
BRCA1-217ENST00000487825 DEPDC4Q8N2C3 294 aa9.29□□□□□ -0.92
BRCA1-217ENST00000487825 DBN1Q16643 649 aa9.28□□□□□ -0.92
BRCA1-217ENST00000487825 EML3Q32P44 896 aa9.28□□□□□ -0.92
BRCA1-217ENST00000487825 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-217ENST00000487825 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
BRCA1-217ENST00000487825 INHAP05111 366 aa9.27□□□□□ -0.93
BRCA1-217ENST00000487825 NCOA4Q13772 614 aa9.27□□□□□ -0.93
BRCA1-217ENST00000487825 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
BRCA1-217ENST00000487825 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
BRCA1-217ENST00000487825 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
BRCA1-217ENST00000487825 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
BRCA1-217ENST00000487825 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-217ENST00000487825 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
BRCA1-217ENST00000487825 GPR25O00155 361 aa9.26□□□□□ -0.93
BRCA1-217ENST00000487825 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
BRCA1-217ENST00000487825 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-217ENST00000487825 GPAMQ9HCL2 828 aa9.26□□□□□ -0.93
BRCA1-217ENST00000487825 NOD1Q9Y239 953 aa9.26□□□□□ -0.93
BRCA1-217ENST00000487825 PCDHGA11Q9Y5H2 935 aa9.26□□□□□ -0.93
BRCA1-217ENST00000487825 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
BRCA1-217ENST00000487825 F11P03951 625 aa9.25□□□□□ -0.93
BRCA1-217ENST00000487825 PSME1Q06323 249 aa9.25□□□□□ -0.93
BRCA1-217ENST00000487825 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
BRCA1-217ENST00000487825 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
BRCA1-217ENST00000487825 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
BRCA1-217ENST00000487825 GTF2IP78347 998 aa9.24□□□□□ -0.93
BRCA1-217ENST00000487825 PPARGC1BQ86YN6 1023 aaKnown RBP9.24□□□□□ -0.93
BRCA1-217ENST00000487825 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
BRCA1-217ENST00000487825 UCN2Q96RP3 112 aa9.24□□□□□ -0.93
BRCA1-217ENST00000487825 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
BRCA1-217ENST00000487825 H7C1W4 665 aa9.23□□□□□ -0.93
BRCA1-217ENST00000487825 SMTNP53814 917 aa9.23□□□□□ -0.93
BRCA1-217ENST00000487825 FOXR1Q6PIV2 292 aa9.23□□□□□ -0.93
BRCA1-217ENST00000487825 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
BRCA1-217ENST00000487825 ARAP1Q96P48 1450 aa9.22□□□□□ -0.93
BRCA1-217ENST00000487825 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-217ENST00000487825 GAS6Q14393 721 aa9.22□□□□□ -0.93
BRCA1-217ENST00000487825 GLMNQ92990 594 aa9.22□□□□□ -0.93
BRCA1-217ENST00000487825 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
BRCA1-217ENST00000487825 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
BRCA1-217ENST00000487825 A0A1B0GTH6 734 aa9.21□□□□□ -0.94
BRCA1-217ENST00000487825 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
BRCA1-217ENST00000487825 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
BRCA1-217ENST00000487825 PLA2G4AP47712 749 aa9.21□□□□□ -0.94
BRCA1-217ENST00000487825 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
BRCA1-217ENST00000487825 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
BRCA1-217ENST00000487825 ATP9BO43861 1147 aa9.2□□□□□ -0.94
BRCA1-217ENST00000487825 MSX1P28360 303 aa9.2□□□□□ -0.94
BRCA1-217ENST00000487825 CYB5RLQ6IPT4 315 aa9.2□□□□□ -0.94
BRCA1-217ENST00000487825 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.2□□□□□ -0.94
BRCA1-217ENST00000487825 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
BRCA1-217ENST00000487825 A6NJR5 290 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 A6NJY4 79 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 CHD1O14646 1710 aa9.19□□□□□ -0.94
BRCA1-217ENST00000487825 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 THBS1P07996 1170 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
BRCA1-217ENST00000487825 NIFKQ9BYG3 293 aaKnown RBP9.18□□□□□ -0.94
BRCA1-217ENST00000487825 ZNF358Q9NW07 568 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
BRCA1-217ENST00000487825 BACH1O14867 736 aa9.17□□□□□ -0.94
BRCA1-217ENST00000487825 SLURP2P0DP57 97 aa9.17□□□□□ -0.94
BRCA1-217ENST00000487825 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms