RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 NWD2Q9ULI1 1742 aa12.05□□□□□ -0.48
SF3B1-211ENST00000487698 CYP27B1O15528 508 aa12.05□□□□□ -0.48
SF3B1-211ENST00000487698 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
SF3B1-211ENST00000487698 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
SF3B1-211ENST00000487698 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
SF3B1-211ENST00000487698 DDX19BQ9UMR2 479 aa12.04□□□□□ -0.48
SF3B1-211ENST00000487698 HEG1Q9ULI3 1381 aa12.04□□□□□ -0.48
SF3B1-211ENST00000487698 EIF4A1P60842 406 aaKnown RBP12.04□□□□□ -0.48
SF3B1-211ENST00000487698 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
SF3B1-211ENST00000487698 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
SF3B1-211ENST00000487698 STRN4Q9NRL3 753 aa12.04□□□□□ -0.48
SF3B1-211ENST00000487698 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 HOXB7P09629 217 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
SF3B1-211ENST00000487698 C5P01031 1676 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 TOGARAM1Q9Y4F4 1720 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 PTPRCP08575 1304 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
SF3B1-211ENST00000487698 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.48
SF3B1-211ENST00000487698 IL2RBP14784 551 aa12.02□□□□□ -0.48
SF3B1-211ENST00000487698 EVA1CP58658 441 aa12.02□□□□□ -0.48
SF3B1-211ENST00000487698 DCAF5Q96JK2 942 aa12.02□□□□□ -0.48
SF3B1-211ENST00000487698 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.48
SF3B1-211ENST00000487698 PAPPAQ13219 1627 aa12.02□□□□□ -0.48
SF3B1-211ENST00000487698 GLI3P10071 1580 aa12.02□□□□□ -0.49
SF3B1-211ENST00000487698 KCNQ3O43525 872 aa12.02□□□□□ -0.49
SF3B1-211ENST00000487698 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.49
SF3B1-211ENST00000487698 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
SF3B1-211ENST00000487698 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
SF3B1-211ENST00000487698 CCDC30Q5VVM6 783 aa12.01□□□□□ -0.49
SF3B1-211ENST00000487698 ZCRB1Q8TBF4 217 aaKnown RBP12.01□□□□□ -0.49
SF3B1-211ENST00000487698 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
SF3B1-211ENST00000487698 ZBTB40Q9NUA8 1239 aa12.01□□□□□ -0.49
SF3B1-211ENST00000487698 SLIT2O94813 1529 aa12□□□□□ -0.49
SF3B1-211ENST00000487698 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
SF3B1-211ENST00000487698 IGHDP01880 384 aa11.99□□□□□ -0.49
SF3B1-211ENST00000487698 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-211ENST00000487698 G2E3Q7L622 706 aa11.99□□□□□ -0.49
SF3B1-211ENST00000487698 STK31Q9BXU1 1019 aa11.99□□□□□ -0.49
SF3B1-211ENST00000487698 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
SF3B1-211ENST00000487698 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
SF3B1-211ENST00000487698 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
SF3B1-211ENST00000487698 PXDNLA1KZ92 1463 aa11.99□□□□□ -0.49
SF3B1-211ENST00000487698 ZBTB7BO15156 539 aaPredicted RBP11.98□□□□□ -0.49
SF3B1-211ENST00000487698 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 LRP6O75581 1613 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 ITGB4P16144 1822 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 JCADQ9P266 1359 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
SF3B1-211ENST00000487698 ZNF790Q6PG37 636 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 NFATC2IPQ8NCF5 419 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
SF3B1-211ENST00000487698 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
SF3B1-211ENST00000487698 FLIIQ13045 1269 aa11.97□□□□□ -0.49
SF3B1-211ENST00000487698 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
SF3B1-211ENST00000487698 USP35Q9P2H5 1018 aa11.96□□□□□ -0.49
SF3B1-211ENST00000487698 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.5
SF3B1-211ENST00000487698 HDAC1Q13547 482 aaPredicted RBP11.96□□□□□ -0.5
SF3B1-211ENST00000487698 NECTIN2Q92692 538 aa11.96□□□□□ -0.5
SF3B1-211ENST00000487698 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.96□□□□□ -0.5
SF3B1-211ENST00000487698 TNS2Q63HR2 1409 aa11.96□□□□□ -0.5
SF3B1-211ENST00000487698 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
SF3B1-211ENST00000487698 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
SF3B1-211ENST00000487698 CABP4P57796 275 aa11.95□□□□□ -0.5
SF3B1-211ENST00000487698 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
SF3B1-211ENST00000487698 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
SF3B1-211ENST00000487698 SPATA31A1Q5TZJ5 1347 aa11.95□□□□□ -0.5
SF3B1-211ENST00000487698 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
SF3B1-211ENST00000487698 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
SF3B1-211ENST00000487698 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
SF3B1-211ENST00000487698 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
SF3B1-211ENST00000487698 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 F6X3S4 739 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 SKAP1Q86WV1 359 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 DOT1LQ8TEK3 1739 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 ZNF496Q96IT1 587 aaPredicted RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 ATP10DQ9P241 1426 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 SPATA31A5Q5VU36 1347 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 SPATA31A7Q8IWB4 1347 aa11.93□□□□□ -0.5
SF3B1-211ENST00000487698 CCT4P50991 539 aaKnown RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 PHAXQ9H814 394 aaKnown RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
SF3B1-211ENST00000487698 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
SF3B1-211ENST00000487698 CDCA7Q9BWT1 371 aaPredicted RBP11.92□□□□□ -0.5
SF3B1-211ENST00000487698 BCL9LQ86UU0 1499 aa11.92□□□□□ -0.5
SF3B1-211ENST00000487698 SPATA31A6Q5VVP1 1343 aa11.92□□□□□ -0.5
SF3B1-211ENST00000487698 FMNL2Q96PY5 1086 aa11.92□□□□□ -0.5
SF3B1-211ENST00000487698 PROSER3Q2NL68 480 aa11.91□□□□□ -0.5
SF3B1-211ENST00000487698 ADCY9O60503 1353 aa11.91□□□□□ -0.5
SF3B1-211ENST00000487698 SNRPA1P09661 255 aaKnown RBP11.9□□□□□ -0.5
SF3B1-211ENST00000487698 PDIA6Q15084 440 aa11.9□□□□□ -0.5
SF3B1-211ENST00000487698 SMC5Q8IY18 1101 aa11.9□□□□□ -0.5
SF3B1-211ENST00000487698 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
SF3B1-211ENST00000487698 ANXA1P04083 346 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms