RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 ITPK1Q13572 414 aa21.36■■□□□ 1.01
NME1-208ENST00000487481 JMYQ8N9B5 988 aa21.36■■□□□ 1.01
NME1-208ENST00000487481 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
NME1-208ENST00000487481 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
NME1-208ENST00000487481 ARHGAP27Q6ZUM4 889 aa21.35■■□□□ 1.01
NME1-208ENST00000487481 C16orf71Q8IYS4 520 aaPredicted RBP21.35■■□□□ 1.01
NME1-208ENST00000487481 SPG7Q9UQ90 795 aa21.35■■□□□ 1.01
NME1-208ENST00000487481 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
NME1-208ENST00000487481 PCNTO95613 3336 aa21.34■■□□□ 1.01
NME1-208ENST00000487481 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
NME1-208ENST00000487481 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
NME1-208ENST00000487481 ATP6V1AP38606 617 aa21.34■■□□□ 1.01
NME1-208ENST00000487481 FSTL1Q12841 308 aa21.34■■□□□ 1.01
NME1-208ENST00000487481 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
NME1-208ENST00000487481 NLGN1Q8N2Q7 840 aa21.33■■□□□ 1.01
NME1-208ENST00000487481 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
NME1-208ENST00000487481 ZNF831Q5JPB2 1677 aa21.32■■□□□ 1
NME1-208ENST00000487481 FCHSD2O94868 740 aa21.32■■□□□ 1
NME1-208ENST00000487481 TMF1P82094 1093 aa21.32■■□□□ 1
NME1-208ENST00000487481 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
NME1-208ENST00000487481 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
NME1-208ENST00000487481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.31■■□□□ 14e-7■□□□□ 9.1
NME1-208ENST00000487481 RTCBQ9Y3I0 505 aaKnown RBP21.31■■□□□ 1
NME1-208ENST00000487481 KDRP35968 1356 aa21.31■■□□□ 1
NME1-208ENST00000487481 DPEP1P16444 411 aa21.3■■□□□ 1
NME1-208ENST00000487481 HTRA3P83110 453 aa21.3■■□□□ 1
NME1-208ENST00000487481 TRAPPC3LQ5T215 181 aa21.3■■□□□ 1
NME1-208ENST00000487481 C9orf131Q5VYM1 1079 aa21.3■■□□□ 1
NME1-208ENST00000487481 TONSLQ96HA7 1378 aa21.3■■□□□ 1
NME1-208ENST00000487481 TNRC6CQ9HCJ0 1690 aaKnown RBP21.3■■□□□ 1
NME1-208ENST00000487481 ADRA2BP18089 450 aa21.29■■□□□ 1
NME1-208ENST00000487481 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
NME1-208ENST00000487481 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
NME1-208ENST00000487481 ATG3Q9NT62 314 aa21.28■■□□□ 1
NME1-208ENST00000487481 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
NME1-208ENST00000487481 KCPQ6ZWJ8 1503 aa21.28■■□□□ 1
NME1-208ENST00000487481 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
NME1-208ENST00000487481 TNS4Q8IZW8 715 aa21.27■■□□□ 1
NME1-208ENST00000487481 CAPN15O75808 1086 aa21.26■□□□□ 0.99
NME1-208ENST00000487481 GYS1P13807 737 aa21.26■□□□□ 0.99
NME1-208ENST00000487481 PHKG2P15735 406 aa21.26■□□□□ 0.99
NME1-208ENST00000487481 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
NME1-208ENST00000487481 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
NME1-208ENST00000487481 ARHGEF1Q92888 912 aaKnown RBP21.25■□□□□ 0.99
NME1-208ENST00000487481 CNTNAP4Q9C0A0 1308 aa21.25■□□□□ 0.99
NME1-208ENST00000487481 KCNA3P22001 575 aa21.24■□□□□ 0.99
NME1-208ENST00000487481 PRELPP51888 382 aa21.24■□□□□ 0.99
NME1-208ENST00000487481 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
NME1-208ENST00000487481 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
NME1-208ENST00000487481 RFC4P35249 363 aa21.23■□□□□ 0.99
NME1-208ENST00000487481 SBF1O95248 1867 aa21.23■□□□□ 0.99
NME1-208ENST00000487481 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
NME1-208ENST00000487481 EYA1Q99502 592 aa21.22■□□□□ 0.99
NME1-208ENST00000487481 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
NME1-208ENST00000487481 MYH14Q7Z406 1995 aaKnown RBP21.22■□□□□ 0.99
NME1-208ENST00000487481 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
NME1-208ENST00000487481 PPM1GO15355 546 aaPredicted RBP21.21■□□□□ 0.99
NME1-208ENST00000487481 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
NME1-208ENST00000487481 DALRD3Q5D0E6 543 aaKnown RBP21.21■□□□□ 0.99
NME1-208ENST00000487481 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
NME1-208ENST00000487481 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
NME1-208ENST00000487481 RRAGCQ9HB90 399 aa21.2■□□□□ 0.98
NME1-208ENST00000487481 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
NME1-208ENST00000487481 CDCA8Q53HL2 280 aa21.18■□□□□ 0.98
NME1-208ENST00000487481 ZC3H4Q9UPT8 1303 aaKnown RBP21.18■□□□□ 0.98
NME1-208ENST00000487481 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
NME1-208ENST00000487481 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
NME1-208ENST00000487481 USP42Q9H9J4 1324 aaKnown RBP21.14■□□□□ 0.97
NME1-208ENST00000487481 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
NME1-208ENST00000487481 HSPA1AP0DMV8 641 aaKnown RBP21.13■□□□□ 0.97
NME1-208ENST00000487481 HSPA1BP0DMV9 641 aaKnown RBP21.13■□□□□ 0.97
NME1-208ENST00000487481 DDR1Q08345 913 aa21.13■□□□□ 0.97
NME1-208ENST00000487481 CHRNA5P30532 468 aa21.12■□□□□ 0.97
NME1-208ENST00000487481 FKBP8Q14318 412 aa21.12■□□□□ 0.97
NME1-208ENST00000487481 CRKLP46109 303 aaKnown RBP21.11■□□□□ 0.97
NME1-208ENST00000487481 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
NME1-208ENST00000487481 SRP68Q9UHB9 627 aaKnown RBP21.11■□□□□ 0.97
NME1-208ENST00000487481 EIF4A2Q14240 407 aaKnown RBP21.1■□□□□ 0.97
NME1-208ENST00000487481 TJP1Q07157 1748 aa21.09■□□□□ 0.97
NME1-208ENST00000487481 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
NME1-208ENST00000487481 VEGFAP15692 232 aaPredicted RBP21.09■□□□□ 0.97
NME1-208ENST00000487481 CABP4P57796 275 aa21.09■□□□□ 0.97
NME1-208ENST00000487481 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
NME1-208ENST00000487481 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.97
NME1-208ENST00000487481 GLTPD2A6NH11 291 aa21.08■□□□□ 0.97
NME1-208ENST00000487481 POLRMTO00411 1230 aaKnown RBP21.08■□□□□ 0.97
NME1-208ENST00000487481 RASSF7Q02833 373 aa21.08■□□□□ 0.97
NME1-208ENST00000487481 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
NME1-208ENST00000487481 LMNB1P20700 586 aa21.07■□□□□ 0.96
NME1-208ENST00000487481 PLEKHO1Q53GL0 409 aaPredicted RBP21.06■□□□□ 0.96
NME1-208ENST00000487481 TM4SF1P30408 202 aa21.05■□□□□ 0.96
NME1-208ENST00000487481 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
NME1-208ENST00000487481 AFDNP55196 1824 aaKnown RBP21.05■□□□□ 0.96
NME1-208ENST00000487481 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
NME1-208ENST00000487481 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
NME1-208ENST00000487481 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
NME1-208ENST00000487481 ZPR1O75312 459 aa21.02■□□□□ 0.96
NME1-208ENST00000487481 MTHFSP49914 203 aa21.02■□□□□ 0.96
NME1-208ENST00000487481 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
NME1-208ENST00000487481 INTS5Q6P9B9 1019 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms