RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 CABP4P57796 275 aa21.36■■□□□ 1.01
GABPA-203ENST00000487266 MTHFSDQ2M296 383 aaKnown RBP21.36■■□□□ 1.01
GABPA-203ENST00000487266 COL23A1Q86Y22 540 aaPredicted RBP21.36■■□□□ 1.01
GABPA-203ENST00000487266 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
GABPA-203ENST00000487266 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
GABPA-203ENST00000487266 MRC1P22897 1456 aa21.34■■□□□ 1.01
GABPA-203ENST00000487266 MSH5O43196 834 aa21.34■■□□□ 1.01
GABPA-203ENST00000487266 ATP6V1AP38606 617 aa21.34■■□□□ 1.01
GABPA-203ENST00000487266 AKAP4Q5JQC9 854 aa21.34■■□□□ 1.01
GABPA-203ENST00000487266 NFATC2IPQ8NCF5 419 aa21.33■■□□□ 1.01
GABPA-203ENST00000487266 AK7Q96M32 723 aa21.33■■□□□ 1.01
GABPA-203ENST00000487266 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
GABPA-203ENST00000487266 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
GABPA-203ENST00000487266 TJP1Q07157 1748 aa21.32■■□□□ 1
GABPA-203ENST00000487266 PHF14O94880 888 aa21.32■■□□□ 1
GABPA-203ENST00000487266 MSL1Q68DK7 614 aa21.32■■□□□ 1
GABPA-203ENST00000487266 CFAP53Q96M91 514 aa21.32■■□□□ 1
GABPA-203ENST00000487266 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
GABPA-203ENST00000487266 FHDC1Q9C0D6 1143 aaPredicted RBP21.32■■□□□ 1
GABPA-203ENST00000487266 SLC16A10Q8TF71 515 aa21.3■■□□□ 1
GABPA-203ENST00000487266 ARXQ96QS3 562 aa21.3■■□□□ 1
GABPA-203ENST00000487266 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
GABPA-203ENST00000487266 RNMTO43148 476 aaKnown RBP21.29■■□□□ 1
GABPA-203ENST00000487266 RSPH6AQ9H0K4 717 aa21.29■■□□□ 1
GABPA-203ENST00000487266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.28■■□□□ 1
GABPA-203ENST00000487266 PTCD1O75127 700 aaKnown RBP21.28■■□□□ 1
GABPA-203ENST00000487266 PRKAR2BP31323 418 aa21.28■■□□□ 1
GABPA-203ENST00000487266 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
GABPA-203ENST00000487266 SLC52A2Q9HAB3 445 aa21.28■■□□□ 1
GABPA-203ENST00000487266 CICQ96RK0 1608 aaPredicted RBP21.27■■□□□ 1
GABPA-203ENST00000487266 GNPATO15228 680 aa21.27■■□□□ 1
GABPA-203ENST00000487266 PHACTR3Q96KR7 559 aa21.27■■□□□ 1
GABPA-203ENST00000487266 SIPA1L3O60292 1781 aaPredicted RBP21.27■■□□□ 1
GABPA-203ENST00000487266 MAP3K5Q99683 1374 aa21.26■□□□□ 0.99
GABPA-203ENST00000487266 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
GABPA-203ENST00000487266 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
GABPA-203ENST00000487266 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
GABPA-203ENST00000487266 SYT17Q9BSW7 474 aa21.26■□□□□ 0.99
GABPA-203ENST00000487266 KCPQ6ZWJ8 1503 aa21.25■□□□□ 0.99
GABPA-203ENST00000487266 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
GABPA-203ENST00000487266 POLD1P28340 1107 aa21.25■□□□□ 0.99
GABPA-203ENST00000487266 SLC39A6Q13433 755 aa21.25■□□□□ 0.99
GABPA-203ENST00000487266 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
GABPA-203ENST00000487266 UTRNP46939 3433 aa21.24■□□□□ 0.99
GABPA-203ENST00000487266 SSFA2P28290 1259 aa21.23■□□□□ 0.99
GABPA-203ENST00000487266 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
GABPA-203ENST00000487266 NUDCQ9Y266 331 aa21.23■□□□□ 0.99
GABPA-203ENST00000487266 FLAD1Q8NFF5 587 aa21.22■□□□□ 0.99
GABPA-203ENST00000487266 HMGB2P26583 209 aaKnown RBP21.21■□□□□ 0.99
GABPA-203ENST00000487266 IL17REQ8NFR9 667 aa21.21■□□□□ 0.99
GABPA-203ENST00000487266 CNTNAP4Q9C0A0 1308 aa21.21■□□□□ 0.99
GABPA-203ENST00000487266 GNAT3A8MTJ3 354 aa21.2■□□□□ 0.98
GABPA-203ENST00000487266 GOLGB1Q14789 3259 aaKnown RBP21.19■□□□□ 0.98
GABPA-203ENST00000487266 DNAJC10Q8IXB1 793 aa21.19■□□□□ 0.98
GABPA-203ENST00000487266 NLGN2Q8NFZ4 835 aa21.19■□□□□ 0.98
GABPA-203ENST00000487266 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
GABPA-203ENST00000487266 RTCBQ9Y3I0 505 aaKnown RBP21.18■□□□□ 0.98
GABPA-203ENST00000487266 CRKLP46109 303 aaKnown RBP21.17■□□□□ 0.98
GABPA-203ENST00000487266 CEMIPQ8WUJ3 1361 aa21.17■□□□□ 0.98
GABPA-203ENST00000487266 FCHSD2O94868 740 aa21.16■□□□□ 0.98
GABPA-203ENST00000487266 TEFQ10587 303 aa21.15■□□□□ 0.98
GABPA-203ENST00000487266 RC3H1Q5TC82 1133 aaKnown RBP21.15■□□□□ 0.98
GABPA-203ENST00000487266 RPS6KA4O75676 772 aa21.14■□□□□ 0.97
GABPA-203ENST00000487266 RALBP1Q15311 655 aa21.14■□□□□ 0.97
GABPA-203ENST00000487266 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
GABPA-203ENST00000487266 MCM10Q7L590 875 aa21.14■□□□□ 0.97
GABPA-203ENST00000487266 ARHGEF1Q92888 912 aaKnown RBP21.14■□□□□ 0.97
GABPA-203ENST00000487266 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
GABPA-203ENST00000487266 INTS5Q6P9B9 1019 aaKnown RBP21.13■□□□□ 0.97
GABPA-203ENST00000487266 KCNQ3O43525 872 aa21.11■□□□□ 0.97
GABPA-203ENST00000487266 TTC5Q8N0Z6 440 aa21.11■□□□□ 0.97
GABPA-203ENST00000487266 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
GABPA-203ENST00000487266 SRP68Q9UHB9 627 aaKnown RBP21.11■□□□□ 0.97
GABPA-203ENST00000487266 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
GABPA-203ENST00000487266 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 CYP19A1P11511 503 aaPredicted RBP21.1■□□□□ 0.97
GABPA-203ENST00000487266 ADRA2BP18089 450 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 RFC4P35249 363 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 ZNF790Q6PG37 636 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 CCDC87Q9NVE4 849 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 ZBTB1Q9Y2K1 713 aa21.1■□□□□ 0.97
GABPA-203ENST00000487266 MMP10P09238 476 aa21.09■□□□□ 0.97
GABPA-203ENST00000487266 GYS1P13807 737 aa21.09■□□□□ 0.97
GABPA-203ENST00000487266 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
GABPA-203ENST00000487266 SOS1Q07889 1333 aaPredicted RBP21.08■□□□□ 0.97
GABPA-203ENST00000487266 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
GABPA-203ENST00000487266 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
GABPA-203ENST00000487266 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.96
GABPA-203ENST00000487266 USP42Q9H9J4 1324 aaKnown RBP21.07■□□□□ 0.96
GABPA-203ENST00000487266 BTBD11A6QL63 1104 aa21.07■□□□□ 0.96
GABPA-203ENST00000487266 KIAA1551Q9HCM1 1747 aa21.07■□□□□ 0.96
GABPA-203ENST00000487266 VSIG10Q8N0Z9 540 aa21.06■□□□□ 0.96
GABPA-203ENST00000487266 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
GABPA-203ENST00000487266 COL15A1P39059 1388 aa21.06■□□□□ 0.96
GABPA-203ENST00000487266 KIF13BQ9NQT8 1826 aa21.06■□□□□ 0.96
GABPA-203ENST00000487266 CHD4Q14839 1912 aa21.06■□□□□ 0.96
GABPA-203ENST00000487266 GPR162Q16538 588 aa21.05■□□□□ 0.96
GABPA-203ENST00000487266 CD2APQ9Y5K6 639 aa21.05■□□□□ 0.96
GABPA-203ENST00000487266 YBX3P16989 372 aaKnown RBP eCLIP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms