RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 PANK1Q8TE04 598 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 STK31Q9BXU1 1019 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 COG6Q9Y2V7 657 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 ADAMTS7Q9UKP4 1686 aa7.85□□□□□ -1.15
VAMP3-203ENST00000487194 JCADQ9P266 1359 aa7.84□□□□□ -1.15
VAMP3-203ENST00000487194 PTPRCP08575 1304 aa7.84□□□□□ -1.15
VAMP3-203ENST00000487194 EIF4A1P60842 406 aaKnown RBP7.84□□□□□ -1.15
VAMP3-203ENST00000487194 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
VAMP3-203ENST00000487194 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-203ENST00000487194 SLC52A2Q9HAB3 445 aa7.84□□□□□ -1.15
VAMP3-203ENST00000487194 DDX19BQ9UMR2 479 aa7.84□□□□□ -1.15
VAMP3-203ENST00000487194 CYP27B1O15528 508 aa7.83□□□□□ -1.16
VAMP3-203ENST00000487194 RLBP1P12271 317 aa7.83□□□□□ -1.16
VAMP3-203ENST00000487194 NKX1-1Q15270 411 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-203ENST00000487194 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
VAMP3-203ENST00000487194 THRAP3Q9Y2W1 955 aaKnown RBP7.83□□□□□ -1.16
VAMP3-203ENST00000487194 KDM3BQ7LBC6 1761 aa7.83□□□□□ -1.16
VAMP3-203ENST00000487194 SPATA31A6Q5VVP1 1343 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 MRC1P22897 1456 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 SCN11AQ9UI33 1791 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 NUTM2BA6NNL0 878 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-203ENST00000487194 NUTM2EB1AL46 878 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-203ENST00000487194 ERVV-2B6SEH9 535 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 KDM6AO15550 1401 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-203ENST00000487194 ADAMTS2O95450 1211 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 CABP4P57796 275 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 CENPQQ7L2Z9 268 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-203ENST00000487194 NUTM2AQ8IVF1 878 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-203ENST00000487194 ITPRIPQ8IWB1 547 aa7.82□□□□□ -1.16
VAMP3-203ENST00000487194 SIPA1L3O60292 1781 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-203ENST00000487194 ABCC4O15439 1325 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 CACNA1FO60840 1977 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 VIRMAQ69YN4 1812 aaKnown RBP7.81□□□□□ -1.16
VAMP3-203ENST00000487194 TCERG1O14776 1098 aaKnown RBP7.81□□□□□ -1.16
VAMP3-203ENST00000487194 HDGFL1Q5TGJ6 251 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 TTC5Q8N0Z6 440 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 TMEM57Q8N5G2 664 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 TNNQ9UQP3 1299 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 PLCH1Q4KWH8 1693 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 HEG1Q9ULI3 1381 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 NWD2Q9ULI1 1742 aa7.81□□□□□ -1.16
VAMP3-203ENST00000487194 DISP2A7MBM2 1401 aa7.8□□□□□ -1.16
VAMP3-203ENST00000487194 SLIT2O94813 1529 aa7.8□□□□□ -1.16
VAMP3-203ENST00000487194 EXOC5O00471 708 aa7.8□□□□□ -1.16
VAMP3-203ENST00000487194 GIGYF1O75420 1035 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-203ENST00000487194 INTS3Q68E01 1043 aaKnown RBP7.8□□□□□ -1.16
VAMP3-203ENST00000487194 ZNF790Q6PG37 636 aa7.8□□□□□ -1.16
VAMP3-203ENST00000487194 NFATC2IPQ8NCF5 419 aa7.8□□□□□ -1.16
VAMP3-203ENST00000487194 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
VAMP3-203ENST00000487194 RWDD1Q9H446 243 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-203ENST00000487194 SPATA31A1Q5TZJ5 1347 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 NRAPQ86VF7 1730 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 KCNQ3O43525 872 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 CCT4P50991 539 aaKnown RBP7.79□□□□□ -1.16
VAMP3-203ENST00000487194 FLIIQ13045 1269 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 UNC5CLQ8IV45 518 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 ZBTB40Q9NUA8 1239 aa7.79□□□□□ -1.16
VAMP3-203ENST00000487194 DBF4Q9UBU7 674 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-203ENST00000487194 SPATA31A5Q5VU36 1347 aa7.78□□□□□ -1.16
VAMP3-203ENST00000487194 SPATA31A7Q8IWB4 1347 aa7.78□□□□□ -1.16
VAMP3-203ENST00000487194 ZBTB7BO15156 539 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-203ENST00000487194 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
VAMP3-203ENST00000487194 EIF2S2P20042 333 aaKnown RBP7.78□□□□□ -1.16
VAMP3-203ENST00000487194 FKBP5Q13451 457 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-203ENST00000487194 BARGINQ6ZT62 677 aa7.78□□□□□ -1.16
VAMP3-203ENST00000487194 NGLY1Q96IV0 654 aa7.78□□□□□ -1.16
VAMP3-203ENST00000487194 TNS2Q63HR2 1409 aa7.78□□□□□ -1.16
VAMP3-203ENST00000487194 PXDNLA1KZ92 1463 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 SLC39A6Q13433 755 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 HDAC1Q13547 482 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-203ENST00000487194 VPS72Q15906 364 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 DDB1Q16531 1140 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 G2E3Q7L622 706 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-203ENST00000487194 NECTIN2Q92692 538 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 C8orf37Q96NL8 207 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 HYPKQ9NX55 129 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 TMOD3Q9NYL9 352 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 CHPF2Q9P2E5 772 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
VAMP3-203ENST00000487194 PCDHB15Q9Y5E8 787 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 WNK3Q9BYP7 1800 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 SHANK3Q9BYB0 1731 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 LRP6O75581 1613 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 RGS12O14924 1447 aa7.77□□□□□ -1.17
VAMP3-203ENST00000487194 DDX58O95786 925 aaKnown RBP7.76□□□□□ -1.17
VAMP3-203ENST00000487194 HSPA1LP34931 641 aa7.76□□□□□ -1.17
VAMP3-203ENST00000487194 SLC4A10Q6U841 1118 aa7.76□□□□□ -1.17
VAMP3-203ENST00000487194 ZNF496Q96IT1 587 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-203ENST00000487194 DDX21Q9NR30 783 aaKnown RBP eCLIP7.76□□□□□ -1.17
VAMP3-203ENST00000487194 ERBB4Q15303 1308 aa7.76□□□□□ -1.17
VAMP3-203ENST00000487194 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
VAMP3-203ENST00000487194 IGHDP01880 384 aa7.75□□□□□ -1.17
VAMP3-203ENST00000487194 IFFO2Q5TF58 517 aa7.75□□□□□ -1.17
VAMP3-203ENST00000487194 MEX3CQ5U5Q3 659 aaKnown RBP7.75□□□□□ -1.17
VAMP3-203ENST00000487194 TEX13AQ9BXU3 409 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms