RNA–Protein interactions for RNA: ENST00000486862.1

OPTN-211, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-211ENST00000486862 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
OPTN-211ENST00000486862 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
OPTN-211ENST00000486862 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
OPTN-211ENST00000486862 HOXB7P09629 217 aa13.91□□□□□ -0.18
OPTN-211ENST00000486862 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
OPTN-211ENST00000486862 VPS72Q15906 364 aa13.91□□□□□ -0.18
OPTN-211ENST00000486862 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
OPTN-211ENST00000486862 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
OPTN-211ENST00000486862 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 MS4A1P11836 297 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 ARHGAP45Q92619 1136 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
OPTN-211ENST00000486862 ELL2O00472 640 aaPredicted RBP13.89□□□□□ -0.19
OPTN-211ENST00000486862 EXOC6Q8TAG9 804 aa13.89□□□□□ -0.19
OPTN-211ENST00000486862 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
OPTN-211ENST00000486862 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
OPTN-211ENST00000486862 TNS2Q63HR2 1409 aa13.89□□□□□ -0.19
OPTN-211ENST00000486862 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
OPTN-211ENST00000486862 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
OPTN-211ENST00000486862 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
OPTN-211ENST00000486862 EXOC5O00471 708 aa13.87□□□□□ -0.19
OPTN-211ENST00000486862 KCNQ3O43525 872 aa13.87□□□□□ -0.19
OPTN-211ENST00000486862 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
OPTN-211ENST00000486862 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
OPTN-211ENST00000486862 NFATC2IPQ8NCF5 419 aa13.87□□□□□ -0.19
OPTN-211ENST00000486862 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
OPTN-211ENST00000486862 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
OPTN-211ENST00000486862 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
OPTN-211ENST00000486862 TRIM27P14373 513 aa13.86□□□□□ -0.19
OPTN-211ENST00000486862 CABP4P57796 275 aa13.86□□□□□ -0.19
OPTN-211ENST00000486862 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
OPTN-211ENST00000486862 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
OPTN-211ENST00000486862 TOGARAM1Q9Y4F4 1720 aa13.86□□□□□ -0.19
OPTN-211ENST00000486862 AAMPQ13685 434 aa13.85□□□□□ -0.19
OPTN-211ENST00000486862 CCDC30Q5VVM6 783 aa13.85□□□□□ -0.19
OPTN-211ENST00000486862 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
OPTN-211ENST00000486862 USP21Q9UK80 565 aa13.85□□□□□ -0.19
OPTN-211ENST00000486862 PAPPAQ13219 1627 aa13.85□□□□□ -0.19
OPTN-211ENST00000486862 GIGYF1O75420 1035 aaPredicted RBP13.84□□□□□ -0.19
OPTN-211ENST00000486862 DDB1Q16531 1140 aa13.84□□□□□ -0.19
OPTN-211ENST00000486862 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
OPTN-211ENST00000486862 ATRNO75882 1429 aa13.83□□□□□ -0.2
OPTN-211ENST00000486862 RLBP1P12271 317 aa13.83□□□□□ -0.2
OPTN-211ENST00000486862 API5Q9BZZ5 524 aaKnown RBP13.83□□□□□ -0.2
OPTN-211ENST00000486862 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
OPTN-211ENST00000486862 PTPRCP08575 1304 aa13.83□□□□□ -0.2
OPTN-211ENST00000486862 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
OPTN-211ENST00000486862 THSD7AQ9UPZ6 1657 aa13.82□□□□□ -0.2
OPTN-211ENST00000486862 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
OPTN-211ENST00000486862 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
OPTN-211ENST00000486862 GLI3P10071 1580 aa13.82□□□□□ -0.2
OPTN-211ENST00000486862 ITGB4P16144 1822 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
OPTN-211ENST00000486862 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 MVPQ14764 893 aaKnown RBP13.81□□□□□ -0.2
OPTN-211ENST00000486862 HDGFL1Q5TGJ6 251 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 ABCC4O15439 1325 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 AFF2P51816 1311 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 RGS12O14924 1447 aa13.81□□□□□ -0.2
OPTN-211ENST00000486862 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
OPTN-211ENST00000486862 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
OPTN-211ENST00000486862 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
OPTN-211ENST00000486862 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
OPTN-211ENST00000486862 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
OPTN-211ENST00000486862 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
OPTN-211ENST00000486862 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
OPTN-211ENST00000486862 MARCH10Q8NA82 808 aaPredicted RBP13.79□□□□□ -0.2
OPTN-211ENST00000486862 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
OPTN-211ENST00000486862 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
OPTN-211ENST00000486862 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
OPTN-211ENST00000486862 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
OPTN-211ENST00000486862 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
OPTN-211ENST00000486862 BCL9O00512 1426 aa13.79□□□□□ -0.2
OPTN-211ENST00000486862 C5P01031 1676 aa13.79□□□□□ -0.2
OPTN-211ENST00000486862 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
OPTN-211ENST00000486862 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
OPTN-211ENST00000486862 G2E3Q7L622 706 aa13.78□□□□□ -0.2
OPTN-211ENST00000486862 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
OPTN-211ENST00000486862 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
OPTN-211ENST00000486862 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
OPTN-211ENST00000486862 FLIIQ13045 1269 aa13.77□□□□□ -0.21
OPTN-211ENST00000486862 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.21
OPTN-211ENST00000486862 DOT1LQ8TEK3 1739 aa13.77□□□□□ -0.21
OPTN-211ENST00000486862 PIGBQ92521 554 aa13.77□□□□□ -0.21
OPTN-211ENST00000486862 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
OPTN-211ENST00000486862 DBF4Q9UBU7 674 aaPredicted RBP13.77□□□□□ -0.21
OPTN-211ENST00000486862 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
OPTN-211ENST00000486862 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
OPTN-211ENST00000486862 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
OPTN-211ENST00000486862 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
OPTN-211ENST00000486862 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms