RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
COL9A1-207ENST00000486080 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
COL9A1-207ENST00000486080 FNBP4Q8N3X1 1017 aaPredicted RBP18.56■□□□□ 0.56
COL9A1-207ENST00000486080 ALDH1L2Q3SY69 923 aa18.55■□□□□ 0.56
COL9A1-207ENST00000486080 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
COL9A1-207ENST00000486080 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
COL9A1-207ENST00000486080 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
COL9A1-207ENST00000486080 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
COL9A1-207ENST00000486080 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
COL9A1-207ENST00000486080 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
COL9A1-207ENST00000486080 NKX1-1Q15270 411 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-207ENST00000486080 ERICH6BQ5W0A0 696 aa18.53■□□□□ 0.56
COL9A1-207ENST00000486080 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
COL9A1-207ENST00000486080 MRC1P22897 1456 aa18.53■□□□□ 0.56
COL9A1-207ENST00000486080 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
COL9A1-207ENST00000486080 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
COL9A1-207ENST00000486080 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
COL9A1-207ENST00000486080 VPS72Q15906 364 aa18.52■□□□□ 0.56
COL9A1-207ENST00000486080 MRPL50Q8N5N7 158 aaKnown RBP18.52■□□□□ 0.56
COL9A1-207ENST00000486080 USP21Q9UK80 565 aa18.52■□□□□ 0.56
COL9A1-207ENST00000486080 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
COL9A1-207ENST00000486080 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.52■□□□□ 0.55
COL9A1-207ENST00000486080 TOGARAM1Q9Y4F4 1720 aa18.51■□□□□ 0.55
COL9A1-207ENST00000486080 EXOC5O00471 708 aa18.51■□□□□ 0.55
COL9A1-207ENST00000486080 SLC39A6Q13433 755 aa18.51■□□□□ 0.55
COL9A1-207ENST00000486080 PANK1Q8TE04 598 aa18.51■□□□□ 0.55
COL9A1-207ENST00000486080 CABP4P57796 275 aa18.5■□□□□ 0.55
COL9A1-207ENST00000486080 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
COL9A1-207ENST00000486080 ZKSCAN2Q63HK3 967 aa18.49■□□□□ 0.55
COL9A1-207ENST00000486080 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
COL9A1-207ENST00000486080 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
COL9A1-207ENST00000486080 RLBP1P12271 317 aa18.49■□□□□ 0.55
COL9A1-207ENST00000486080 BRPF1P55201 1214 aaPredicted RBP18.49■□□□□ 0.55
COL9A1-207ENST00000486080 PDE3AQ14432 1141 aa18.49■□□□□ 0.55
COL9A1-207ENST00000486080 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
COL9A1-207ENST00000486080 AFF2P51816 1311 aa18.48■□□□□ 0.55
COL9A1-207ENST00000486080 ERVV-2B6SEH9 535 aa18.48■□□□□ 0.55
COL9A1-207ENST00000486080 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
COL9A1-207ENST00000486080 ZNF790Q6PG37 636 aa18.48■□□□□ 0.55
COL9A1-207ENST00000486080 PPP4R2Q9NY27 417 aa18.48■□□□□ 0.55
COL9A1-207ENST00000486080 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
COL9A1-207ENST00000486080 KAT6BQ8WYB5 2073 aa18.47■□□□□ 0.55
COL9A1-207ENST00000486080 TRIM27P14373 513 aa18.47■□□□□ 0.55
COL9A1-207ENST00000486080 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
COL9A1-207ENST00000486080 DDB1Q16531 1140 aa18.46■□□□□ 0.55
COL9A1-207ENST00000486080 ITGB4P16144 1822 aa18.46■□□□□ 0.55
COL9A1-207ENST00000486080 ATF7IPQ6VMQ6 1270 aa18.46■□□□□ 0.55
COL9A1-207ENST00000486080 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
COL9A1-207ENST00000486080 COG6Q9Y2V7 657 aa18.45■□□□□ 0.54
COL9A1-207ENST00000486080 SOS1Q07889 1333 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-207ENST00000486080 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
COL9A1-207ENST00000486080 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
COL9A1-207ENST00000486080 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
COL9A1-207ENST00000486080 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
COL9A1-207ENST00000486080 DZIP1LQ8IYY4 767 aaKnown RBP18.44■□□□□ 0.54
COL9A1-207ENST00000486080 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
COL9A1-207ENST00000486080 C5P01031 1676 aa18.43■□□□□ 0.54
COL9A1-207ENST00000486080 GLI3P10071 1580 aa18.43■□□□□ 0.54
COL9A1-207ENST00000486080 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
COL9A1-207ENST00000486080 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
COL9A1-207ENST00000486080 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
COL9A1-207ENST00000486080 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
COL9A1-207ENST00000486080 MARCH10Q8NA82 808 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-207ENST00000486080 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-207ENST00000486080 PAPPAQ13219 1627 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 HOXB7P09629 217 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 G2E3Q7L622 706 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 FTSJ3Q8IY81 847 aaKnown RBP18.42■□□□□ 0.54
COL9A1-207ENST00000486080 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 TMOD3Q9NYL9 352 aa18.42■□□□□ 0.54
COL9A1-207ENST00000486080 DOT1LQ8TEK3 1739 aa18.41■□□□□ 0.54
COL9A1-207ENST00000486080 ATRNO75882 1429 aa18.41■□□□□ 0.54
COL9A1-207ENST00000486080 GJD4Q96KN9 370 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-207ENST00000486080 UBR2Q8IWV8 1755 aa18.41■□□□□ 0.54
COL9A1-207ENST00000486080 MS4A1P11836 297 aa18.4■□□□□ 0.54
COL9A1-207ENST00000486080 PIGBQ92521 554 aa18.4■□□□□ 0.54
COL9A1-207ENST00000486080 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.54
COL9A1-207ENST00000486080 THSD7AQ9UPZ6 1657 aa18.39■□□□□ 0.54
COL9A1-207ENST00000486080 A0A0G2JS52 829 aa18.39■□□□□ 0.53
COL9A1-207ENST00000486080 MYT1Q01538 1121 aa18.39■□□□□ 0.53
COL9A1-207ENST00000486080 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
COL9A1-207ENST00000486080 CHPF2Q9P2E5 772 aa18.39■□□□□ 0.53
COL9A1-207ENST00000486080 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-207ENST00000486080 MVPQ14764 893 aaKnown RBP18.38■□□□□ 0.53
COL9A1-207ENST00000486080 RGS12O14924 1447 aa18.38■□□□□ 0.53
COL9A1-207ENST00000486080 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
COL9A1-207ENST00000486080 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
COL9A1-207ENST00000486080 SYTL4Q96C24 671 aaPredicted RBP18.37■□□□□ 0.53
COL9A1-207ENST00000486080 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
COL9A1-207ENST00000486080 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
COL9A1-207ENST00000486080 QTRT2Q9H974 415 aaKnown RBP18.37■□□□□ 0.53
COL9A1-207ENST00000486080 ANXA1P04083 346 aa18.37■□□□□ 0.53
COL9A1-207ENST00000486080 ITPRIPQ8IWB1 547 aa18.37■□□□□ 0.53
COL9A1-207ENST00000486080 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
COL9A1-207ENST00000486080 ABCC4O15439 1325 aa18.37■□□□□ 0.53
COL9A1-207ENST00000486080 BCL9O00512 1426 aa18.37■□□□□ 0.53
COL9A1-207ENST00000486080 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
COL9A1-207ENST00000486080 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms