RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
GCFC2-209ENST00000486016 VAC14Q08AM6 782 aa9.52□□□□□ -0.89
GCFC2-209ENST00000486016 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
GCFC2-209ENST00000486016 FOXR1Q6PIV2 292 aa9.52□□□□□ -0.89
GCFC2-209ENST00000486016 XAGE2Q96GT9 111 aa9.52□□□□□ -0.89
GCFC2-209ENST00000486016 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.89
GCFC2-209ENST00000486016 CENPCQ03188 943 aa9.51□□□□□ -0.89
GCFC2-209ENST00000486016 CNKSR1Q969H4 720 aa9.51□□□□□ -0.89
GCFC2-209ENST00000486016 FHDC1Q9C0D6 1143 aaPredicted RBP9.51□□□□□ -0.89
GCFC2-209ENST00000486016 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
GCFC2-209ENST00000486016 MYCP01106 439 aaPredicted RBP9.49□□□□□ -0.89
GCFC2-209ENST00000486016 ACDQ96AP0 544 aa9.49□□□□□ -0.89
GCFC2-209ENST00000486016 THBS1P07996 1170 aa9.48□□□□□ -0.89
GCFC2-209ENST00000486016 RIPOR1Q6ZS17 1223 aa9.48□□□□□ -0.89
GCFC2-209ENST00000486016 TAS1R3Q7RTX0 852 aa9.48□□□□□ -0.89
GCFC2-209ENST00000486016 Q8N3U1 123 aa9.48□□□□□ -0.89
GCFC2-209ENST00000486016 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
GCFC2-209ENST00000486016 DOLKQ9UPQ8 538 aa9.48□□□□□ -0.89
GCFC2-209ENST00000486016 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
GCFC2-209ENST00000486016 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
GCFC2-209ENST00000486016 ABL2P42684 1182 aa9.47□□□□□ -0.89
GCFC2-209ENST00000486016 USP4Q13107 963 aa9.47□□□□□ -0.89
GCFC2-209ENST00000486016 SLFNL1Q499Z3 407 aa9.47□□□□□ -0.89
GCFC2-209ENST00000486016 RNF135Q8IUD6 432 aa9.47□□□□□ -0.89
GCFC2-209ENST00000486016 BAG6P46379 1132 aa9.46□□□□□ -0.9
GCFC2-209ENST00000486016 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
GCFC2-209ENST00000486016 TIMMDC1Q9NPL8 285 aa9.46□□□□□ -0.9
GCFC2-209ENST00000486016 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
GCFC2-209ENST00000486016 H7C1W4 665 aa9.45□□□□□ -0.9
GCFC2-209ENST00000486016 F11P03951 625 aa9.45□□□□□ -0.9
GCFC2-209ENST00000486016 GTPBP3Q969Y2 492 aaKnown RBP9.45□□□□□ -0.9
GCFC2-209ENST00000486016 TRERF1Q96PN7 1200 aa9.45□□□□□ -0.9
GCFC2-209ENST00000486016 GAS2L1Q99501 681 aaPredicted RBP9.45□□□□□ -0.9
GCFC2-209ENST00000486016 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
GCFC2-209ENST00000486016 SCNN1DP51172 638 aa9.44□□□□□ -0.9
GCFC2-209ENST00000486016 PSMG3-AS1Q96PY0 264 aa9.44□□□□□ -0.9
GCFC2-209ENST00000486016 ZSCAN10Q96SZ4 725 aaPredicted RBP9.44□□□□□ -0.9
GCFC2-209ENST00000486016 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
GCFC2-209ENST00000486016 KRBA1A5PL33 1030 aa9.43□□□□□ -0.9
GCFC2-209ENST00000486016 FURINP09958 794 aa9.43□□□□□ -0.9
GCFC2-209ENST00000486016 UBAP2LQ14157 1087 aaKnown RBP9.43□□□□□ -0.9
GCFC2-209ENST00000486016 C4orf17Q53FE4 359 aa9.43□□□□□ -0.9
GCFC2-209ENST00000486016 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
GCFC2-209ENST00000486016 OIP5O43482 229 aa9.42□□□□□ -0.9
GCFC2-209ENST00000486016 SOX11P35716 441 aa9.42□□□□□ -0.9
GCFC2-209ENST00000486016 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
GCFC2-209ENST00000486016 OXLD1Q5BKU9 147 aa9.42□□□□□ -0.9
GCFC2-209ENST00000486016 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
GCFC2-209ENST00000486016 MX2P20592 715 aa9.41□□□□□ -0.9
GCFC2-209ENST00000486016 PHKA2P46019 1235 aa9.41□□□□□ -0.9
GCFC2-209ENST00000486016 SNRPNP63162 240 aaKnown RBP9.41□□□□□ -0.9
GCFC2-209ENST00000486016 PPARGC1BQ86YN6 1023 aaKnown RBP9.41□□□□□ -0.9
GCFC2-209ENST00000486016 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
GCFC2-209ENST00000486016 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
GCFC2-209ENST00000486016 A0A1B0GTH6 734 aa9.4□□□□□ -0.9
GCFC2-209ENST00000486016 SEMA3FQ13275 785 aa9.4□□□□□ -0.9
GCFC2-209ENST00000486016 SIRT1Q96EB6 747 aa9.4□□□□□ -0.9
GCFC2-209ENST00000486016 ALG2Q9H553 416 aa9.4□□□□□ -0.9
GCFC2-209ENST00000486016 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.39□□□□□ -0.91
GCFC2-209ENST00000486016 PIK3CDO00329 1044 aa9.39□□□□□ -0.91
GCFC2-209ENST00000486016 INHAP05111 366 aa9.39□□□□□ -0.91
GCFC2-209ENST00000486016 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
GCFC2-209ENST00000486016 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
GCFC2-209ENST00000486016 GNASQ5JWF2 1037 aa9.38□□□□□ -0.91
GCFC2-209ENST00000486016 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
GCFC2-209ENST00000486016 RHBDD1Q8TEB9 315 aa9.38□□□□□ -0.91
GCFC2-209ENST00000486016 KRTAP9-2Q9BYQ4 174 aa9.38□□□□□ -0.91
GCFC2-209ENST00000486016 MSX1P28360 303 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 MAP2K3P46734 347 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 GDF10P55107 478 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 CFHR5Q9BXR6 569 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 PCDHGA11Q9Y5H2 935 aa9.37□□□□□ -0.91
GCFC2-209ENST00000486016 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
GCFC2-209ENST00000486016 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
GCFC2-209ENST00000486016 TLR1Q15399 786 aa9.36□□□□□ -0.91
GCFC2-209ENST00000486016 SLC4A9Q96Q91 983 aa9.36□□□□□ -0.91
GCFC2-209ENST00000486016 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
GCFC2-209ENST00000486016 COL8A1P27658 744 aa9.35□□□□□ -0.91
GCFC2-209ENST00000486016 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
GCFC2-209ENST00000486016 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
GCFC2-209ENST00000486016 SMTNP53814 917 aa9.34□□□□□ -0.91
GCFC2-209ENST00000486016 CRISPLD1Q9H336 500 aa9.34□□□□□ -0.91
GCFC2-209ENST00000486016 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
GCFC2-209ENST00000486016 NDFIP2Q9NV92 336 aa9.34□□□□□ -0.91
GCFC2-209ENST00000486016 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
GCFC2-209ENST00000486016 KRTAP9-6A0A140TA67 174 aa9.33□□□□□ -0.92
GCFC2-209ENST00000486016 MTFR1Q15390 333 aa9.33□□□□□ -0.92
GCFC2-209ENST00000486016 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
GCFC2-209ENST00000486016 ADAMTS19Q8TE59 1207 aa9.33□□□□□ -0.92
GCFC2-209ENST00000486016 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
GCFC2-209ENST00000486016 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
GCFC2-209ENST00000486016 ATP4AP20648 1035 aa9.31□□□□□ -0.92
GCFC2-209ENST00000486016 GRIN2CQ14957 1233 aa9.31□□□□□ -0.92
GCFC2-209ENST00000486016 C1orf229Q6ZS94 237 aaPredicted RBP9.31□□□□□ -0.92
GCFC2-209ENST00000486016 USP3Q9Y6I4 520 aa9.31□□□□□ -0.92
GCFC2-209ENST00000486016 CDK2AP1O14519 115 aa9.3□□□□□ -0.92
GCFC2-209ENST00000486016 LZTS3O60299 673 aaPredicted RBP9.3□□□□□ -0.92
GCFC2-209ENST00000486016 PLA2G4AP47712 749 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms