RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 DDX19BQ9UMR2 479 aa27.69■■■□□ 2.02
CDK5-204ENST00000485972 KCNQ3O43525 872 aa27.68■■■□□ 2.02
CDK5-204ENST00000485972 USP35Q9P2H5 1018 aa27.68■■■□□ 2.02
CDK5-204ENST00000485972 KDM6AO15550 1401 aaPredicted RBP27.68■■■□□ 2.02
CDK5-204ENST00000485972 CCDC30Q5VVM6 783 aa27.68■■■□□ 2.02
CDK5-204ENST00000485972 CERKQ8TCT0 537 aa27.67■■■□□ 2.02
CDK5-204ENST00000485972 STK31Q9BXU1 1019 aa27.67■■■□□ 2.02
CDK5-204ENST00000485972 SLC52A2Q9HAB3 445 aa27.67■■■□□ 2.02
CDK5-204ENST00000485972 PKD1L3Q7Z443 1732 aa27.67■■■□□ 2.02
CDK5-204ENST00000485972 NUTM2BA6NNL0 878 aaPredicted RBP27.66■■■□□ 2.02
CDK5-204ENST00000485972 NUTM2EB1AL46 878 aaPredicted RBP27.66■■■□□ 2.02
CDK5-204ENST00000485972 NUTM2AQ8IVF1 878 aaPredicted RBP27.66■■■□□ 2.02
CDK5-204ENST00000485972 PCDH11XQ9BZA7 1347 aa27.66■■■□□ 2.02
CDK5-204ENST00000485972 PCDH11YQ9BZA8 1340 aa27.66■■■□□ 2.02
CDK5-204ENST00000485972 ADAMTS7Q9UKP4 1686 aa27.66■■■□□ 2.02
CDK5-204ENST00000485972 KDM2BQ8NHM5 1336 aa27.66■■■□□ 2.02
CDK5-204ENST00000485972 CENPQQ7L2Z9 268 aaPredicted RBP27.65■■■□□ 2.02
CDK5-204ENST00000485972 ABCC4O15439 1325 aa27.65■■■□□ 2.02
CDK5-204ENST00000485972 PTPRCP08575 1304 aa27.64■■■□□ 2.02
CDK5-204ENST00000485972 PARP4Q9UKK3 1724 aaKnown RBP27.64■■■□□ 2.02
CDK5-204ENST00000485972 HOXB7P09629 217 aa27.63■■■□□ 2.01
CDK5-204ENST00000485972 NFATC2IPQ8NCF5 419 aa27.63■■■□□ 2.01
CDK5-204ENST00000485972 NECTIN2Q92692 538 aa27.63■■■□□ 2.01
CDK5-204ENST00000485972 HDGFL1Q5TGJ6 251 aa27.62■■■□□ 2.01
CDK5-204ENST00000485972 KDM3BQ7LBC6 1761 aa27.61■■■□□ 2.01
CDK5-204ENST00000485972 CHMP4AQ9BY43 222 aa27.61■■■□□ 2.01
CDK5-204ENST00000485972 DDX54Q8TDD1 881 aaKnown RBP27.6■■■□□ 2.01
CDK5-204ENST00000485972 PCDHB15Q9Y5E8 787 aa27.6■■■□□ 2.01
CDK5-204ENST00000485972 G2E3Q7L622 706 aa27.59■■■□□ 2.01
CDK5-204ENST00000485972 IGHDP01880 384 aa27.58■■■□□ 2.01
CDK5-204ENST00000485972 EIF2S2P20042 333 aaKnown RBP27.58■■■□□ 2.01
CDK5-204ENST00000485972 CABP4P57796 275 aa27.58■■■□□ 2.01
CDK5-204ENST00000485972 ZNF790Q6PG37 636 aa27.58■■■□□ 2.01
CDK5-204ENST00000485972 CHMP4BQ9H444 224 aaKnown RBP27.58■■■□□ 2.01
CDK5-204ENST00000485972 ZBTB40Q9NUA8 1239 aa27.58■■■□□ 2.01
CDK5-204ENST00000485972 NKX1-1Q15270 411 aaPredicted RBP27.58■■■□□ 2
CDK5-204ENST00000485972 SCN11AQ9UI33 1791 aa27.57■■■□□ 2
CDK5-204ENST00000485972 SIPA1L3O60292 1781 aaPredicted RBP27.56■■■□□ 2
CDK5-204ENST00000485972 JCADQ9P266 1359 aa27.56■■■□□ 2
CDK5-204ENST00000485972 HEG1Q9ULI3 1381 aa27.56■■■□□ 2
CDK5-204ENST00000485972 GIGYF1O75420 1035 aaPredicted RBP27.56■■■□□ 2
CDK5-204ENST00000485972 SLC39A6Q13433 755 aa27.56■■■□□ 2
CDK5-204ENST00000485972 VIRMAQ69YN4 1812 aaKnown RBP27.56■■■□□ 2
CDK5-204ENST00000485972 RGS12O14924 1447 aa27.56■■■□□ 2
CDK5-204ENST00000485972 MRC1P22897 1456 aa27.56■■■□□ 2
CDK5-204ENST00000485972 ZBTB7BO15156 539 aaPredicted RBP27.55■■■□□ 2
CDK5-204ENST00000485972 FLIIQ13045 1269 aa27.55■■■□□ 2
CDK5-204ENST00000485972 INTS3Q68E01 1043 aaKnown RBP27.55■■■□□ 2
CDK5-204ENST00000485972 ERVV-2B6SEH9 535 aa27.53■■■□□ 2
CDK5-204ENST00000485972 RWDD1Q9H446 243 aaPredicted RBP27.53■■■□□ 2
CDK5-204ENST00000485972 DISP2A7MBM2 1401 aa27.52■■■□□ 2
CDK5-204ENST00000485972 TTC5Q8N0Z6 440 aa27.52■■■□□ 2
CDK5-204ENST00000485972 PLCH1Q4KWH8 1693 aa27.51■■□□□ 1.99
CDK5-204ENST00000485972 FKBP5Q13451 457 aaPredicted RBP27.5■■□□□ 1.99
CDK5-204ENST00000485972 CHPF2Q9P2E5 772 aa27.5■■□□□ 1.99
CDK5-204ENST00000485972 TSHZ2Q9NRE2 1034 aa27.5■■□□□ 1.99
CDK5-204ENST00000485972 SPATA31A1Q5TZJ5 1347 aa27.49■■□□□ 1.99
CDK5-204ENST00000485972 PRAMEF22A3QJZ6 481 aa27.48■■□□□ 1.99
CDK5-204ENST00000485972 F6X3S4 739 aa27.48■■□□□ 1.99
CDK5-204ENST00000485972 ZNF496Q96IT1 587 aaPredicted RBP27.48■■□□□ 1.99
CDK5-204ENST00000485972 THRAP3Q9Y2W1 955 aaKnown RBP27.48■■□□□ 1.99
CDK5-204ENST00000485972 EXOC5O00471 708 aa27.48■■□□□ 1.99
CDK5-204ENST00000485972 PHAXQ9H814 394 aaKnown RBP27.48■■□□□ 1.99
CDK5-204ENST00000485972 DBF4Q9UBU7 674 aaPredicted RBP27.48■■□□□ 1.99
CDK5-204ENST00000485972 SLIT2O94813 1529 aa27.47■■□□□ 1.99
CDK5-204ENST00000485972 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
CDK5-204ENST00000485972 CDCA7Q9BWT1 371 aaPredicted RBP27.47■■□□□ 1.99
CDK5-204ENST00000485972 CCT4P50991 539 aaKnown RBP27.46■■□□□ 1.99
CDK5-204ENST00000485972 FMNL2Q96PY5 1086 aa27.46■■□□□ 1.99
CDK5-204ENST00000485972 SHANK3Q9BYB0 1731 aa27.45■■□□□ 1.99
CDK5-204ENST00000485972 HDAC1Q13547 482 aaPredicted RBP27.45■■□□□ 1.99
CDK5-204ENST00000485972 NGLY1Q96IV0 654 aa27.45■■□□□ 1.98
CDK5-204ENST00000485972 C8orf37Q96NL8 207 aa27.45■■□□□ 1.98
CDK5-204ENST00000485972 SPATA31A5Q5VU36 1347 aa27.44■■□□□ 1.98
CDK5-204ENST00000485972 SPATA31A6Q5VVP1 1343 aa27.44■■□□□ 1.98
CDK5-204ENST00000485972 SPATA31A7Q8IWB4 1347 aa27.44■■□□□ 1.98
CDK5-204ENST00000485972 SNRPA1P09661 255 aaKnown RBP27.44■■□□□ 1.98
CDK5-204ENST00000485972 CCDC9Q9Y3X0 531 aaKnown RBP27.44■■□□□ 1.98
CDK5-204ENST00000485972 NRAPQ86VF7 1730 aa27.44■■□□□ 1.98
CDK5-204ENST00000485972 SKAP1Q86WV1 359 aa27.43■■□□□ 1.98
CDK5-204ENST00000485972 UNC5CLQ8IV45 518 aa27.43■■□□□ 1.98
CDK5-204ENST00000485972 ANXA1P04083 346 aa27.42■■□□□ 1.98
CDK5-204ENST00000485972 C1orf115Q9H7X2 142 aa27.42■■□□□ 1.98
CDK5-204ENST00000485972 TMOD3Q9NYL9 352 aa27.4■■□□□ 1.98
CDK5-204ENST00000485972 NWD2Q9ULI1 1742 aa27.4■■□□□ 1.98
CDK5-204ENST00000485972 HSPA1LP34931 641 aa27.4■■□□□ 1.98
CDK5-204ENST00000485972 HYPKQ9NX55 129 aa27.4■■□□□ 1.98
CDK5-204ENST00000485972 PROSER3Q2NL68 480 aa27.39■■□□□ 1.98
CDK5-204ENST00000485972 DDX21Q9NR30 783 aaKnown RBP eCLIP27.39■■□□□ 1.98
CDK5-204ENST00000485972 CACNA1FO60840 1977 aa27.39■■□□□ 1.97
CDK5-204ENST00000485972 DDB1Q16531 1140 aa27.37■■□□□ 1.97
CDK5-204ENST00000485972 BARGINQ6ZT62 677 aa27.37■■□□□ 1.97
CDK5-204ENST00000485972 USP16Q9Y5T5 823 aa27.37■■□□□ 1.97
CDK5-204ENST00000485972 TNS2Q63HR2 1409 aa27.37■■□□□ 1.97
CDK5-204ENST00000485972 PDIA6Q15084 440 aa27.37■■□□□ 1.97
CDK5-204ENST00000485972 MEIS3Q99687 375 aa27.37■■□□□ 1.97
CDK5-204ENST00000485972 FNBP4Q8N3X1 1017 aaPredicted RBP27.36■■□□□ 1.97
CDK5-204ENST00000485972 PI4KAP2A4QPH2 592 aa27.35■■□□□ 1.97
CDK5-204ENST00000485972 PI4KAP1Q8N8J0 262 aa27.35■■□□□ 1.97
CDK5-204ENST00000485972 VPS72Q15906 364 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms