RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
SMARCD3-211ENST00000485592 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
SMARCD3-211ENST00000485592 ATG3Q9NT62 314 aa18.93■□□□□ 0.62
SMARCD3-211ENST00000485592 ZNF831Q5JPB2 1677 aa18.92■□□□□ 0.62
SMARCD3-211ENST00000485592 RTCBQ9Y3I0 505 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-211ENST00000485592 KIF13BQ9NQT8 1826 aa18.91■□□□□ 0.62
SMARCD3-211ENST00000485592 HSP90AB1P08238 724 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-211ENST00000485592 MMP10P09238 476 aa18.91■□□□□ 0.62
SMARCD3-211ENST00000485592 CICQ96RK0 1608 aaPredicted RBP18.91■□□□□ 0.62
SMARCD3-211ENST00000485592 KDRP35968 1356 aa18.91■□□□□ 0.62
SMARCD3-211ENST00000485592 ERVV-2B6SEH9 535 aa18.9■□□□□ 0.62
SMARCD3-211ENST00000485592 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
SMARCD3-211ENST00000485592 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
SMARCD3-211ENST00000485592 DCAF5Q96JK2 942 aa18.89■□□□□ 0.61
SMARCD3-211ENST00000485592 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.61
SMARCD3-211ENST00000485592 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-211ENST00000485592 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
SMARCD3-211ENST00000485592 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
SMARCD3-211ENST00000485592 PXDNLA1KZ92 1463 aa18.88■□□□□ 0.61
SMARCD3-211ENST00000485592 N4BP2Q86UW6 1770 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-211ENST00000485592 HSPA6P17066 643 aa18.87■□□□□ 0.61
SMARCD3-211ENST00000485592 ADRA2BP18089 450 aa18.87■□□□□ 0.61
SMARCD3-211ENST00000485592 TGFB2P61812 414 aa18.87■□□□□ 0.61
SMARCD3-211ENST00000485592 KIAA1551Q9HCM1 1747 aa18.87■□□□□ 0.61
SMARCD3-211ENST00000485592 CNTNAP4Q9C0A0 1308 aa18.86■□□□□ 0.61
SMARCD3-211ENST00000485592 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
SMARCD3-211ENST00000485592 RC3H1Q5TC82 1133 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-211ENST00000485592 ZNF530Q6P9A1 599 aaPredicted RBP18.86■□□□□ 0.61
SMARCD3-211ENST00000485592 C4AP0C0L4 1744 aa18.86■□□□□ 0.61
SMARCD3-211ENST00000485592 C10orf71Q711Q0 1435 aa18.85■□□□□ 0.61
SMARCD3-211ENST00000485592 RFC4P35249 363 aa18.85■□□□□ 0.61
SMARCD3-211ENST00000485592 CABP4P57796 275 aa18.85■□□□□ 0.61
SMARCD3-211ENST00000485592 CCDC87Q9NVE4 849 aa18.85■□□□□ 0.61
SMARCD3-211ENST00000485592 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
SMARCD3-211ENST00000485592 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
SMARCD3-211ENST00000485592 ARHGEF1Q92888 912 aaKnown RBP18.84■□□□□ 0.61
SMARCD3-211ENST00000485592 SLC4A9Q96Q91 983 aa18.84■□□□□ 0.61
SMARCD3-211ENST00000485592 BCS1LQ9Y276 419 aa18.84■□□□□ 0.61
SMARCD3-211ENST00000485592 RPS6KA4O75676 772 aa18.83■□□□□ 0.6
SMARCD3-211ENST00000485592 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
SMARCD3-211ENST00000485592 PANK3Q9H999 370 aa18.83■□□□□ 0.6
SMARCD3-211ENST00000485592 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.6
SMARCD3-211ENST00000485592 GYS1P13807 737 aa18.82■□□□□ 0.6
SMARCD3-211ENST00000485592 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
SMARCD3-211ENST00000485592 A0A0G2JLW4 131 aa18.81■□□□□ 0.6
SMARCD3-211ENST00000485592 KIF3CO14782 793 aa18.81■□□□□ 0.6
SMARCD3-211ENST00000485592 MTHFSP49914 203 aa18.81■□□□□ 0.6
SMARCD3-211ENST00000485592 BRCA1P38398 1863 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-211ENST00000485592 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-211ENST00000485592 MORC1Q86VD1 984 aa18.8■□□□□ 0.6
SMARCD3-211ENST00000485592 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-211ENST00000485592 FCHSD2O94868 740 aa18.79■□□□□ 0.6
SMARCD3-211ENST00000485592 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-211ENST00000485592 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
SMARCD3-211ENST00000485592 CEP350Q5VT06 3117 aa18.78■□□□□ 0.6
SMARCD3-211ENST00000485592 DPEP1P16444 411 aa18.78■□□□□ 0.6
SMARCD3-211ENST00000485592 ARHGAP27Q6ZUM4 889 aa18.78■□□□□ 0.6
SMARCD3-211ENST00000485592 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
SMARCD3-211ENST00000485592 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
SMARCD3-211ENST00000485592 SCN11AQ9UI33 1791 aa18.78■□□□□ 0.6
SMARCD3-211ENST00000485592 TJP1Q07157 1748 aa18.77■□□□□ 0.6
SMARCD3-211ENST00000485592 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
SMARCD3-211ENST00000485592 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
SMARCD3-211ENST00000485592 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
SMARCD3-211ENST00000485592 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
SMARCD3-211ENST00000485592 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-211ENST00000485592 TOMM70O94826 608 aa18.74■□□□□ 0.59
SMARCD3-211ENST00000485592 APLP1P51693 650 aa18.73■□□□□ 0.59
SMARCD3-211ENST00000485592 PIM2Q9P1W9 311 aa18.73■□□□□ 0.59
SMARCD3-211ENST00000485592 SRP68Q9UHB9 627 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-211ENST00000485592 AKAP4Q5JQC9 854 aa18.72■□□□□ 0.59
SMARCD3-211ENST00000485592 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-211ENST00000485592 KCNA3P22001 575 aa18.71■□□□□ 0.59
SMARCD3-211ENST00000485592 IL13P35225 146 aa18.71■□□□□ 0.59
SMARCD3-211ENST00000485592 FKBP8Q14318 412 aa18.71■□□□□ 0.59
SMARCD3-211ENST00000485592 C9orf131Q5VYM1 1079 aa18.71■□□□□ 0.59
SMARCD3-211ENST00000485592 ZPR1O75312 459 aa18.7■□□□□ 0.58
SMARCD3-211ENST00000485592 DDR1Q08345 913 aa18.7■□□□□ 0.58
SMARCD3-211ENST00000485592 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
SMARCD3-211ENST00000485592 NMRK2Q9NPI5 230 aa18.7■□□□□ 0.58
SMARCD3-211ENST00000485592 ADAMTS7Q9UKP4 1686 aa18.69■□□□□ 0.58
SMARCD3-211ENST00000485592 C16orf71Q8IYS4 520 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-211ENST00000485592 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
SMARCD3-211ENST00000485592 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-211ENST00000485592 DNAJC10Q8IXB1 793 aa18.68■□□□□ 0.58
SMARCD3-211ENST00000485592 MRC1P22897 1456 aa18.68■□□□□ 0.58
SMARCD3-211ENST00000485592 POLRMTO00411 1230 aaKnown RBP18.67■□□□□ 0.58
SMARCD3-211ENST00000485592 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
SMARCD3-211ENST00000485592 WDR90Q96KV7 1748 aa18.66■□□□□ 0.58
SMARCD3-211ENST00000485592 USPL1Q5W0Q7 1092 aa18.66■□□□□ 0.58
SMARCD3-211ENST00000485592 RBM46Q8TBY0 533 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-211ENST00000485592 RNF181Q9P0P0 153 aa18.66■□□□□ 0.58
SMARCD3-211ENST00000485592 SOS1Q07889 1333 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-211ENST00000485592 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-211ENST00000485592 KCPQ6ZWJ8 1503 aa18.65■□□□□ 0.58
SMARCD3-211ENST00000485592 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-211ENST00000485592 TM4SF1P30408 202 aa18.65■□□□□ 0.58
SMARCD3-211ENST00000485592 CHRNA5P30532 468 aa18.65■□□□□ 0.58
SMARCD3-211ENST00000485592 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
SMARCD3-211ENST00000485592 COL15A1P39059 1388 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms