RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TJP1Q07157 1748 aa18.21■□□□□ 0.51
UBA3-210ENST00000485424 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
UBA3-210ENST00000485424 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
UBA3-210ENST00000485424 AK7Q96M32 723 aa18.21■□□□□ 0.51
UBA3-210ENST00000485424 EYA1Q99502 592 aa18.21■□□□□ 0.51
UBA3-210ENST00000485424 SPG7Q9UQ90 795 aa18.21■□□□□ 0.51
UBA3-210ENST00000485424 TNNT2P45379 298 aaPredicted RBP18.2■□□□□ 0.5
UBA3-210ENST00000485424 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
UBA3-210ENST00000485424 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
UBA3-210ENST00000485424 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
UBA3-210ENST00000485424 CD2APQ9Y5K6 639 aa18.19■□□□□ 0.5
UBA3-210ENST00000485424 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
UBA3-210ENST00000485424 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
UBA3-210ENST00000485424 PHF14O94880 888 aa18.18■□□□□ 0.5
UBA3-210ENST00000485424 SIK1P57059 783 aa18.18■□□□□ 0.5
UBA3-210ENST00000485424 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
UBA3-210ENST00000485424 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
UBA3-210ENST00000485424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.18■□□□□ 0.51e-8■■■□□ 18.2
UBA3-210ENST00000485424 KDRP35968 1356 aa18.17■□□□□ 0.5
UBA3-210ENST00000485424 ATP10DQ9P241 1426 aa18.17■□□□□ 0.5
UBA3-210ENST00000485424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.17■□□□□ 0.5
UBA3-210ENST00000485424 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
UBA3-210ENST00000485424 PHKG2P15735 406 aa18.16■□□□□ 0.5
UBA3-210ENST00000485424 SSFA2P28290 1259 aa18.16■□□□□ 0.5
UBA3-210ENST00000485424 EIF4A2Q14240 407 aaKnown RBP18.16■□□□□ 0.5
UBA3-210ENST00000485424 PANK3Q9H999 370 aa18.16■□□□□ 0.5
UBA3-210ENST00000485424 ADCY9O60503 1353 aa18.16■□□□□ 0.5
UBA3-210ENST00000485424 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
UBA3-210ENST00000485424 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
UBA3-210ENST00000485424 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
UBA3-210ENST00000485424 ITPK1Q13572 414 aa18.14■□□□□ 0.49
UBA3-210ENST00000485424 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
UBA3-210ENST00000485424 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.49
UBA3-210ENST00000485424 SBF1O95248 1867 aa18.14■□□□□ 0.49
UBA3-210ENST00000485424 IGSF1Q8N6C5 1336 aa18.13■□□□□ 0.49
UBA3-210ENST00000485424 KDM6AO15550 1401 aaPredicted RBP18.13■□□□□ 0.49
UBA3-210ENST00000485424 GNPATO15228 680 aa18.12■□□□□ 0.49
UBA3-210ENST00000485424 CCDC88AQ3V6T2 1871 aa18.12■□□□□ 0.49
UBA3-210ENST00000485424 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
UBA3-210ENST00000485424 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
UBA3-210ENST00000485424 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
UBA3-210ENST00000485424 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
UBA3-210ENST00000485424 UBR2Q8IWV8 1755 aa18.1■□□□□ 0.49
UBA3-210ENST00000485424 DLEC1Q9Y238 1755 aa18.1■□□□□ 0.49
UBA3-210ENST00000485424 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
UBA3-210ENST00000485424 POTEHQ6S545 545 aa18.09■□□□□ 0.49
UBA3-210ENST00000485424 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
UBA3-210ENST00000485424 C10orf71Q711Q0 1435 aa18.08■□□□□ 0.49
UBA3-210ENST00000485424 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
UBA3-210ENST00000485424 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
UBA3-210ENST00000485424 HSP90AB1P08238 724 aaKnown RBP18.06■□□□□ 0.48
UBA3-210ENST00000485424 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
UBA3-210ENST00000485424 SIPA1L3O60292 1781 aaPredicted RBP18.06■□□□□ 0.48
UBA3-210ENST00000485424 MMP10P09238 476 aa18.05■□□□□ 0.48
UBA3-210ENST00000485424 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
UBA3-210ENST00000485424 GPBP1L1Q9HC44 474 aaPredicted RBP18.05■□□□□ 0.48
UBA3-210ENST00000485424 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
UBA3-210ENST00000485424 DSG3P32926 999 aa18.04■□□□□ 0.48
UBA3-210ENST00000485424 ZNF530Q6P9A1 599 aaPredicted RBP18.04■□□□□ 0.48
UBA3-210ENST00000485424 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
UBA3-210ENST00000485424 C1orf141Q5JVX7 400 aa18.03■□□□□ 0.48
UBA3-210ENST00000485424 AEBP1Q8IUX7 1158 aa18.03■□□□□ 0.48
UBA3-210ENST00000485424 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
UBA3-210ENST00000485424 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
UBA3-210ENST00000485424 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
UBA3-210ENST00000485424 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
UBA3-210ENST00000485424 MRC1P22897 1456 aa18.02■□□□□ 0.48
UBA3-210ENST00000485424 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.48
UBA3-210ENST00000485424 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
UBA3-210ENST00000485424 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
UBA3-210ENST00000485424 TNRC6CQ9HCJ0 1690 aaKnown RBP18.01■□□□□ 0.47
UBA3-210ENST00000485424 WDR90Q96KV7 1748 aa18.01■□□□□ 0.47
UBA3-210ENST00000485424 ARHGEF1Q92888 912 aaKnown RBP18■□□□□ 0.47
UBA3-210ENST00000485424 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
UBA3-210ENST00000485424 KIF7Q2M1P5 1343 aa17.99■□□□□ 0.47
UBA3-210ENST00000485424 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
UBA3-210ENST00000485424 GYS1P13807 737 aa17.99■□□□□ 0.47
UBA3-210ENST00000485424 CABP4P57796 275 aa17.99■□□□□ 0.47
UBA3-210ENST00000485424 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
UBA3-210ENST00000485424 MTHFSP49914 203 aa17.98■□□□□ 0.47
UBA3-210ENST00000485424 SULT6B1Q6IMI4 303 aa17.98■□□□□ 0.47
UBA3-210ENST00000485424 NLGN1Q8N2Q7 840 aa17.98■□□□□ 0.47
UBA3-210ENST00000485424 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
UBA3-210ENST00000485424 DICER1Q9UPY3 1922 aaKnown RBP17.98■□□□□ 0.47
UBA3-210ENST00000485424 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
UBA3-210ENST00000485424 SCN7AQ01118 1682 aa17.97■□□□□ 0.47
UBA3-210ENST00000485424 CAPN15O75808 1086 aa17.97■□□□□ 0.47
UBA3-210ENST00000485424 TGFB2P61812 414 aa17.97■□□□□ 0.47
UBA3-210ENST00000485424 PTCD1O75127 700 aaKnown RBP17.96■□□□□ 0.47
UBA3-210ENST00000485424 RFC4P35249 363 aa17.96■□□□□ 0.47
UBA3-210ENST00000485424 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
UBA3-210ENST00000485424 IL13P35225 146 aa17.95■□□□□ 0.46
UBA3-210ENST00000485424 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
UBA3-210ENST00000485424 NFATC2IPQ8NCF5 419 aa17.95■□□□□ 0.46
UBA3-210ENST00000485424 CCDC87Q9NVE4 849 aa17.95■□□□□ 0.46
UBA3-210ENST00000485424 BCS1LQ9Y276 419 aa17.95■□□□□ 0.46
UBA3-210ENST00000485424 HSPA6P17066 643 aa17.94■□□□□ 0.46
UBA3-210ENST00000485424 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
UBA3-210ENST00000485424 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
UBA3-210ENST00000485424 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms