RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-215	ENST00000485036	NRAP	Q86VF7	1730 aa		32.28	■■■□□ 2.76
TNFRSF25-215	ENST00000485036	CYP27B1	O15528	508 aa		32.27	■■■□□ 2.76
TNFRSF25-215	ENST00000485036	TCERG1	O14776	1098 aa	Known RBP	32.26	■■■□□ 2.76
TNFRSF25-215	ENST00000485036	KDM2B	Q8NHM5	1336 aa		32.26	■■■□□ 2.76
TNFRSF25-215	ENST00000485036	IL2RB	P14784	551 aa		32.25	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	ABCC4	O15439	1325 aa		32.25	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	WNK3	Q9BYP7	1800 aa		32.24	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	BTBD11	A6QL63	1104 aa		32.24	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	EIF4A1	P60842	406 aa	Known RBP	32.24	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	HSP90AB1	P08238	724 aa	Known RBP	32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	TMEM57	Q8N5G2	664 aa		32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	PCDH11X	Q9BZA7	1347 aa		32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	PCDH11Y	Q9BZA8	1340 aa		32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	HOXB7	P09629	217 aa		32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	DCAF5	Q96JK2	942 aa		32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	API5	Q9BZZ5	524 aa	Known RBP	32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	DDX19B	Q9UMR2	479 aa		32.23	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	RGS12	O14924	1447 aa		32.22	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	NWD2	Q9ULI1	1742 aa		32.22	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	PTPRC	P08575	1304 aa		32.2	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	ZCRB1	Q8TBF4	217 aa	Known RBP	32.2	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	SLC52A2	Q9HAB3	445 aa		32.2	■■■□□ 2.75
TNFRSF25-215	ENST00000485036	ITPRIP	Q8IWB1	547 aa		32.2	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	DISP2	A7MBM2	1401 aa		32.19	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	HEG1	Q9ULI3	1381 aa		32.19	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	CENPQ	Q7L2Z9	268 aa	Predicted RBP	32.19	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	CCDC30	Q5VVM6	783 aa		32.18	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	KCNQ3	O43525	872 aa		32.17	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	SLC4A2	P04920	1241 aa		32.16	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	STK31	Q9BXU1	1019 aa		32.15	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	NKX1-1	Q15270	411 aa	Predicted RBP	32.14	■■■□□ 2.74
TNFRSF25-215	ENST00000485036	JCAD	Q9P266	1359 aa		32.13	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	CHMP4A	Q9BY43	222 aa		32.13	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	SLIT2	O94813	1529 aa		32.13	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.12	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	ADAMTS2	O95450	1211 aa		32.12	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	ZBTB40	Q9NUA8	1239 aa		32.12	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	HDGFL1	Q5TGJ6	251 aa		32.11	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	PCDHB15	Q9Y5E8	787 aa		32.11	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	TOGARAM1	Q9Y4F4	1720 aa		32.1	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	PAPPA	Q13219	1627 aa		32.09	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	NFATC2IP	Q8NCF5	419 aa		32.09	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	C5	P01031	1676 aa		32.09	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	INTS3	Q68E01	1043 aa	Known RBP	32.09	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	ZNF790	Q6PG37	636 aa		32.09	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	CHMP4B	Q9H444	224 aa	Known RBP	32.09	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	G2E3	Q7L622	706 aa		32.08	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	USP35	Q9P2H5	1018 aa		32.08	■■■□□ 2.73
TNFRSF25-215	ENST00000485036	GIGYF1	O75420	1035 aa	Predicted RBP	32.07	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	GLI3	P10071	1580 aa		32.07	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	IGHD	P01880	384 aa		32.06	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	UBR2	Q8IWV8	1755 aa		32.06	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.06	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	NUTM2E	B1AL46	878 aa	Predicted RBP	32.06	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	ZBTB7B	O15156	539 aa	Predicted RBP	32.06	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.06	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	ERVV-2	B6SEH9	535 aa		32.05	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	FLII	Q13045	1269 aa		32.05	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	CABP4	P57796	275 aa		32.03	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	NECTIN2	Q92692	538 aa		32.03	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	LRP6	O75581	1613 aa		32.03	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	PXDNL	A1KZ92	1463 aa		32.02	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	TNS2	Q63HR2	1409 aa		32.01	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	SPATA31A1	Q5TZJ5	1347 aa		32.01	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	SLC39A6	Q13433	755 aa		32.01	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	THRAP3	Q9Y2W1	955 aa	Known RBP	32.01	■■■□□ 2.72
TNFRSF25-215	ENST00000485036	LAMB4	A4D0S4	1761 aa		32.01	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	DDX54	Q8TDD1	881 aa	Known RBP	32	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	EIF2S2	P20042	333 aa	Known RBP	32	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.99	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	TSHZ2	Q9NRE2	1034 aa		31.99	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	SPATA31A6	Q5VVP1	1343 aa		31.98	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	RWDD1	Q9H446	243 aa	Predicted RBP	31.98	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	CHPF2	Q9P2E5	772 aa		31.98	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	HDAC1	Q13547	482 aa	Predicted RBP	31.97	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	TTC5	Q8N0Z6	440 aa		31.97	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	SPATA31A5	Q5VU36	1347 aa		31.96	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	SPATA31A7	Q8IWB4	1347 aa		31.96	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	FKBP5	Q13451	457 aa	Predicted RBP	31.96	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	ZNF496	Q96IT1	587 aa	Predicted RBP	31.96	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	DBF4	Q9UBU7	674 aa	Predicted RBP	31.96	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	ITGB4	P16144	1822 aa		31.95	■■■□□ 2.71
TNFRSF25-215	ENST00000485036	KCP	Q6ZWJ8	1503 aa		31.95	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.95	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	PRAMEF22	A3QJZ6	481 aa		31.95	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	CCT4	P50991	539 aa	Known RBP	31.95	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	FMNL2	Q96PY5	1086 aa		31.94	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	PHAX	Q9H814	394 aa	Known RBP	31.94	■■■□□ 2.7
TNFRSF25-215	ENST00000485036		F6X3S4	739 aa		31.93	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	BCL9L	Q86UU0	1499 aa		31.91	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	EXOC5	O00471	708 aa		31.9	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	SNRPA1	P09661	255 aa	Known RBP	31.9	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	HSPA1L	P34931	641 aa		31.9	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	UNC5CL	Q8IV45	518 aa		31.9	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	BARGIN	Q6ZT62	677 aa		31.89	■■■□□ 2.7
TNFRSF25-215	ENST00000485036	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.88	■■■□□ 2.69
TNFRSF25-215	ENST00000485036	SLC4A10	Q6U841	1118 aa		31.87	■■■□□ 2.69
TNFRSF25-215	ENST00000485036	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.87	■■■□□ 2.69
TNFRSF25-215	ENST00000485036	HYPK	Q9NX55	129 aa		31.87	■■■□□ 2.69
TNFRSF25-215	ENST00000485036	ATP10D	Q9P241	1426 aa		31.86	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms