RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 LINC00116Q8NCU8 138 aa38.57■■■■□ 3.76
HLA-C-207ENST00000484378 PHF14O94880 888 aa38.56■■■■□ 3.76
HLA-C-207ENST00000484378 MTHFSP49914 203 aa38.56■■■■□ 3.76
HLA-C-207ENST00000484378 C1orf141Q5JVX7 400 aa38.56■■■■□ 3.76
HLA-C-207ENST00000484378 ATP6V1AP38606 617 aa38.55■■■■□ 3.76
HLA-C-207ENST00000484378 AMIGO3Q86WK7 504 aa38.54■■■■□ 3.76
HLA-C-207ENST00000484378 ITPK1Q13572 414 aa38.53■■■■□ 3.76
HLA-C-207ENST00000484378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.52■■■■□ 3.76
HLA-C-207ENST00000484378 CABP4P57796 275 aa38.51■■■■□ 3.76
HLA-C-207ENST00000484378 SSFA2P28290 1259 aa38.5■■■■□ 3.75
HLA-C-207ENST00000484378 GPR162Q16538 588 aa38.5■■■■□ 3.75
HLA-C-207ENST00000484378 NLGN2Q8NFZ4 835 aa38.5■■■■□ 3.75
HLA-C-207ENST00000484378 SMIM5Q71RC9 77 aa38.49■■■■□ 3.75
HLA-C-207ENST00000484378 GOLGB1Q14789 3259 aaKnown RBP38.49■■■■□ 3.75
HLA-C-207ENST00000484378 GNPATO15228 680 aa38.48■■■■□ 3.75
HLA-C-207ENST00000484378 RBM42Q9BTD8 480 aaKnown RBP38.47■■■■□ 3.75
HLA-C-207ENST00000484378 NPC1L1Q9UHC9 1359 aa38.46■■■■□ 3.75
HLA-C-207ENST00000484378 PELP1Q8IZL8 1130 aaKnown RBP38.46■■■■□ 3.75
HLA-C-207ENST00000484378 ZNF831Q5JPB2 1677 aa38.46■■■■□ 3.75
HLA-C-207ENST00000484378 CNGB1Q14028 1251 aaPredicted RBP38.45■■■■□ 3.75
HLA-C-207ENST00000484378 CHD4Q14839 1912 aa38.44■■■■□ 3.74
HLA-C-207ENST00000484378 DIAPH1O60610 1272 aaKnown RBP38.42■■■■□ 3.74
HLA-C-207ENST00000484378 HMOX1P09601 288 aa38.42■■■■□ 3.74
HLA-C-207ENST00000484378 SLC4A9Q96Q91 983 aa38.41■■■■□ 3.74
HLA-C-207ENST00000484378 SCN11AQ9UI33 1791 aa38.4■■■■□ 3.74
HLA-C-207ENST00000484378 COL5A3P25940 1745 aaPredicted RBP38.39■■■■□ 3.74
HLA-C-207ENST00000484378 AKAP4Q5JQC9 854 aa38.39■■■■□ 3.74
HLA-C-207ENST00000484378 NFATC2IPQ8NCF5 419 aa38.38■■■■□ 3.73
HLA-C-207ENST00000484378 RTCBQ9Y3I0 505 aaKnown RBP38.36■■■■□ 3.73
HLA-C-207ENST00000484378 CD2APQ9Y5K6 639 aa38.36■■■■□ 3.73
HLA-C-207ENST00000484378 PTCD1O75127 700 aaKnown RBP38.35■■■■□ 3.73
HLA-C-207ENST00000484378 CNTNAP4Q9C0A0 1308 aa38.34■■■■□ 3.73
HLA-C-207ENST00000484378 COL3A1P02461 1466 aaPredicted RBP38.34■■■■□ 3.73
HLA-C-207ENST00000484378 RC3H1Q5TC82 1133 aaKnown RBP38.32■■■■□ 3.72
HLA-C-207ENST00000484378 TRAPPC3LQ5T215 181 aa38.3■■■■□ 3.72
HLA-C-207ENST00000484378 ZNF784Q8NCA9 323 aaPredicted RBP38.29■■■■□ 3.72
HLA-C-207ENST00000484378 MRC1P22897 1456 aa38.28■■■■□ 3.72
HLA-C-207ENST00000484378 YBX3P16989 372 aaKnown RBP eCLIP38.28■■■■□ 3.72
HLA-C-207ENST00000484378 SLC52A2Q9HAB3 445 aa38.28■■■■□ 3.72
HLA-C-207ENST00000484378 U2SURPO15042 1029 aaKnown RBP38.27■■■■□ 3.72
HLA-C-207ENST00000484378 ADRA2BP18089 450 aa38.27■■■■□ 3.72
HLA-C-207ENST00000484378 MTHFSDQ2M296 383 aaKnown RBP38.27■■■■□ 3.72
HLA-C-207ENST00000484378 LGR6Q9HBX8 967 aa38.27■■■■□ 3.72
HLA-C-207ENST00000484378 VIRMAQ69YN4 1812 aaKnown RBP38.26■■■■□ 3.72
HLA-C-207ENST00000484378 CICQ96RK0 1608 aaPredicted RBP38.26■■■■□ 3.71
HLA-C-207ENST00000484378 TJP1Q07157 1748 aa38.26■■■■□ 3.71
HLA-C-207ENST00000484378 RNMTO43148 476 aaKnown RBP38.25■■■■□ 3.71
HLA-C-207ENST00000484378 GRIN3BO60391 1043 aa38.25■■■■□ 3.71
HLA-C-207ENST00000484378 RPS6KA4O75676 772 aa38.25■■■■□ 3.71
HLA-C-207ENST00000484378 MYH14Q7Z406 1995 aaKnown RBP38.24■■■■□ 3.71
HLA-C-207ENST00000484378 MMP10P09238 476 aa38.23■■■■□ 3.71
HLA-C-207ENST00000484378 ARHGEF1Q92888 912 aaKnown RBP38.23■■■■□ 3.71
HLA-C-207ENST00000484378 CRKLP46109 303 aaKnown RBP38.22■■■■□ 3.71
HLA-C-207ENST00000484378 ADAMTS7Q9UKP4 1686 aa38.22■■■■□ 3.71
HLA-C-207ENST00000484378 C4AP0C0L4 1744 aa38.21■■■■□ 3.71
HLA-C-207ENST00000484378 RFC4P35249 363 aa38.21■■■■□ 3.71
HLA-C-207ENST00000484378 NLGN1Q8N2Q7 840 aa38.19■■■■□ 3.7
HLA-C-207ENST00000484378 CFAP53Q96M91 514 aa38.18■■■■□ 3.7
HLA-C-207ENST00000484378 GYS1P13807 737 aa38.15■■■■□ 3.7
HLA-C-207ENST00000484378 SLC39A6Q13433 755 aa38.15■■■■□ 3.7
HLA-C-207ENST00000484378 KCPQ6ZWJ8 1503 aa38.13■■■■□ 3.69
HLA-C-207ENST00000484378 DNAJC10Q8IXB1 793 aa38.13■■■■□ 3.69
HLA-C-207ENST00000484378 GAS2L2Q8NHY3 880 aa38.13■■■■□ 3.69
HLA-C-207ENST00000484378 WWC3Q9ULE0 1092 aa38.11■■■■□ 3.69
HLA-C-207ENST00000484378 INTS5Q6P9B9 1019 aaKnown RBP38.09■■■■□ 3.69
HLA-C-207ENST00000484378 CCDC87Q9NVE4 849 aa38.09■■■■□ 3.69
HLA-C-207ENST00000484378 KIF13BQ9NQT8 1826 aa38.09■■■■□ 3.69
HLA-C-207ENST00000484378 PPP2R1AP30153 589 aa38.08■■■■□ 3.69
HLA-C-207ENST00000484378 C10orf71Q711Q0 1435 aa38.07■■■■□ 3.69
HLA-C-207ENST00000484378 GNAT3A8MTJ3 354 aa38.07■■■■□ 3.68
HLA-C-207ENST00000484378 SRP68Q9UHB9 627 aaKnown RBP38.07■■■■□ 3.68
HLA-C-207ENST00000484378 NUDCQ9Y266 331 aa38.07■■■■□ 3.68
HLA-C-207ENST00000484378 PARP3Q9Y6F1 533 aa38.07■■■■□ 3.68
HLA-C-207ENST00000484378 USP42Q9H9J4 1324 aaKnown RBP38.07■■■■□ 3.68
HLA-C-207ENST00000484378 UBR2Q8IWV8 1755 aa38.06■■■■□ 3.68
HLA-C-207ENST00000484378 PXDNLA1KZ92 1463 aa38.05■■■■□ 3.68
HLA-C-207ENST00000484378 PRKAR2BP31323 418 aa38.05■■■■□ 3.68
HLA-C-207ENST00000484378 TEFQ10587 303 aa38.05■■■■□ 3.68
HLA-C-207ENST00000484378 CYP19A1P11511 503 aaPredicted RBP38.04■■■■□ 3.68
HLA-C-207ENST00000484378 TTC5Q8N0Z6 440 aa38.04■■■■□ 3.68
HLA-C-207ENST00000484378 RSPH6AQ9H0K4 717 aa38.03■■■■□ 3.68
HLA-C-207ENST00000484378 KIAA1551Q9HCM1 1747 aa38.02■■■■□ 3.68
HLA-C-207ENST00000484378 VSIG10Q8N0Z9 540 aa38.02■■■■□ 3.68
HLA-C-207ENST00000484378 IL17REQ8NFR9 667 aa38.02■■■■□ 3.68
HLA-C-207ENST00000484378 SOS1Q07889 1333 aaPredicted RBP38.02■■■■□ 3.68
HLA-C-207ENST00000484378 U2AF1L5P0DN76 240 aaPredicted RBP38■■■■□ 3.67
HLA-C-207ENST00000484378 TGFB2P61812 414 aa38■■■■□ 3.67
HLA-C-207ENST00000484378 U2AF1Q01081 240 aaKnown RBP eCLIP38■■■■□ 3.67
HLA-C-207ENST00000484378 FKBP8Q14318 412 aa38■■■■□ 3.67
HLA-C-207ENST00000484378 N4BP2Q86UW6 1770 aaPredicted RBP38■■■■□ 3.67
HLA-C-207ENST00000484378 SIPA1L3O60292 1781 aaPredicted RBP37.99■■■■□ 3.67
HLA-C-207ENST00000484378 PHACTR3Q96KR7 559 aa37.99■■■■□ 3.67
HLA-C-207ENST00000484378 ZPR1O75312 459 aa37.97■■■■□ 3.67
HLA-C-207ENST00000484378 ZBTB1Q9Y2K1 713 aa37.97■■■■□ 3.67
HLA-C-207ENST00000484378 COL15A1P39059 1388 aa37.96■■■■□ 3.67
HLA-C-207ENST00000484378 A0A0G2JLW4 131 aa37.95■■■■□ 3.67
HLA-C-207ENST00000484378 CEMIPQ8WUJ3 1361 aa37.94■■■■□ 3.66
HLA-C-207ENST00000484378 USPL1Q5W0Q7 1092 aa37.94■■■■□ 3.66
HLA-C-207ENST00000484378 ZNF790Q6PG37 636 aa37.94■■■■□ 3.66
HLA-C-207ENST00000484378 DDR1Q08345 913 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms