RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 GLIPR1L2Q4G1C9 344 aa24.19■■□□□ 1.46
LIMS2-215ENST00000484252 XRN1Q8IZH2 1706 aaKnown RBP24.18■■□□□ 1.46
LIMS2-215ENST00000484252 RRAGDQ9NQL2 400 aaPredicted RBP24.18■■□□□ 1.46
LIMS2-215ENST00000484252 RGPD8O14715 1765 aaPredicted RBP24.17■■□□□ 1.46
LIMS2-215ENST00000484252 BAG4O95429 457 aaKnown RBP24.17■■□□□ 1.46
LIMS2-215ENST00000484252 FLIIQ13045 1269 aa24.17■■□□□ 1.46
LIMS2-215ENST00000484252 PXDNLA1KZ92 1463 aa24.17■■□□□ 1.46
LIMS2-215ENST00000484252 NLRP6P59044 892 aa24.17■■□□□ 1.46
LIMS2-215ENST00000484252 HOXC9P31274 260 aa24.16■■□□□ 1.46
LIMS2-215ENST00000484252 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
LIMS2-215ENST00000484252 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
LIMS2-215ENST00000484252 IBTKQ9P2D0 1353 aaPredicted RBP24.16■■□□□ 1.46
LIMS2-215ENST00000484252 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
LIMS2-215ENST00000484252 CYP2E1P05181 493 aaPredicted RBP24.15■■□□□ 1.46
LIMS2-215ENST00000484252 KLHL40Q2TBA0 621 aa24.15■■□□□ 1.46
LIMS2-215ENST00000484252 LRRCC1Q9C099 1032 aa24.15■■□□□ 1.46
LIMS2-215ENST00000484252 SALL3Q9BXA9 1300 aa24.15■■□□□ 1.46
LIMS2-215ENST00000484252 N4BP2Q86UW6 1770 aaPredicted RBP24.15■■□□□ 1.46
LIMS2-215ENST00000484252 NWD1Q149M9 1564 aa24.14■■□□□ 1.46
LIMS2-215ENST00000484252 ATP8B2P98198 1209 aa24.14■■□□□ 1.46
LIMS2-215ENST00000484252 FKBP5Q13451 457 aaPredicted RBP24.14■■□□□ 1.46
LIMS2-215ENST00000484252 CACNA1FO60840 1977 aa24.14■■□□□ 1.45
LIMS2-215ENST00000484252 MARF1Q9Y4F3 1742 aaKnown RBP24.12■■□□□ 1.45
LIMS2-215ENST00000484252 TAF7Q15545 349 aaPredicted RBP24.12■■□□□ 1.45
LIMS2-215ENST00000484252 SRCIN1Q9C0H9 1055 aa24.12■■□□□ 1.45
LIMS2-215ENST00000484252 EXOC6BQ9Y2D4 811 aa24.11■■□□□ 1.45
LIMS2-215ENST00000484252 GAS2L3Q86XJ1 694 aa24.11■■□□□ 1.45
LIMS2-215ENST00000484252 MX1P20591 662 aa24.1■■□□□ 1.45
LIMS2-215ENST00000484252 DDX49Q9Y6V7 483 aaKnown RBP24.1■■□□□ 1.45
LIMS2-215ENST00000484252 MCM2P49736 904 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 IL17REQ8NFR9 667 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 STAP2Q9UGK3 403 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 TUBGCP6Q96RT7 1819 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 AOX1Q06278 1338 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 MCCP23508 829 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 PLPPR3Q6T4P5 718 aa24.09■■□□□ 1.45
LIMS2-215ENST00000484252 CLCN1P35523 988 aa24.08■■□□□ 1.45
LIMS2-215ENST00000484252 ESYT1Q9BSJ8 1104 aa24.08■■□□□ 1.45
LIMS2-215ENST00000484252 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
LIMS2-215ENST00000484252 ANAPC15P60006 121 aa24.06■■□□□ 1.44
LIMS2-215ENST00000484252 MCTP1Q6DN14 999 aa24.06■■□□□ 1.44
LIMS2-215ENST00000484252 ABTB2Q8N961 1025 aa24.06■■□□□ 1.44
LIMS2-215ENST00000484252 CHMP4AQ9BY43 222 aa24.06■■□□□ 1.44
LIMS2-215ENST00000484252 EPB41L2O43491 1005 aaKnown RBP24.04■■□□□ 1.44
LIMS2-215ENST00000484252 LRRFIP2Q9Y608 721 aaKnown RBP24.04■■□□□ 1.44
LIMS2-215ENST00000484252 UBTFL1P0CB47 393 aaPredicted RBP24.04■■□□□ 1.44
LIMS2-215ENST00000484252 KCNA6P17658 529 aa24.04■■□□□ 1.44
LIMS2-215ENST00000484252 IL17RAQ96F46 866 aa24.04■■□□□ 1.44
LIMS2-215ENST00000484252 CHMLP26374 656 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 ZNF445P59923 1031 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 USP44Q9H0E7 712 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 LMBRD1Q9NUN5 540 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 RAB11FIP3O75154 756 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 HDGFL1Q5TGJ6 251 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 ZGPATQ8N5A5 531 aaKnown RBP24.03■■□□□ 1.44
LIMS2-215ENST00000484252 NECTIN2Q92692 538 aa24.03■■□□□ 1.44
LIMS2-215ENST00000484252 SSH3Q8TE77 659 aa24.02■■□□□ 1.44
LIMS2-215ENST00000484252 TRIM44Q96DX7 344 aaPredicted RBP24.02■■□□□ 1.44
LIMS2-215ENST00000484252 CEMIPQ8WUJ3 1361 aa24.02■■□□□ 1.44
LIMS2-215ENST00000484252 HOXB7P09629 217 aa24.01■■□□□ 1.43
LIMS2-215ENST00000484252 NEK4P51957 841 aa24.01■■□□□ 1.43
LIMS2-215ENST00000484252 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
LIMS2-215ENST00000484252 CCDC173Q0VFZ6 552 aa24■■□□□ 1.43
LIMS2-215ENST00000484252 LTV1Q96GA3 475 aaPredicted RBP24■■□□□ 1.43
LIMS2-215ENST00000484252 MED1Q15648 1581 aaPredicted RBP24■■□□□ 1.43
LIMS2-215ENST00000484252 TRIM6-TRIM34B2RNG4 842 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 PKP1Q13835 747 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 TSHZ3Q63HK5 1081 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 IP6K1Q92551 441 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 RILPL2Q969X0 211 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 TMX3Q96JJ7 454 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 AK9Q5TCS8 1911 aa23.99■■□□□ 1.43
LIMS2-215ENST00000484252 ESPNB1AK53 854 aa23.98■■□□□ 1.43
LIMS2-215ENST00000484252 NASPP49321 788 aaPredicted RBP23.98■■□□□ 1.43
LIMS2-215ENST00000484252 CUL4AQ13619 759 aa23.98■■□□□ 1.43
LIMS2-215ENST00000484252 ANP32BQ92688 251 aaKnown RBP23.98■■□□□ 1.43
LIMS2-215ENST00000484252 ZDHHC9Q9Y397 364 aa23.98■■□□□ 1.43
LIMS2-215ENST00000484252 PPP1R9BQ96SB3 815 aa23.98■■□□□ 1.43
LIMS2-215ENST00000484252 POLA2Q14181 598 aa23.97■■□□□ 1.43
LIMS2-215ENST00000484252 INTS4Q96HW7 963 aaKnown RBP23.97■■□□□ 1.43
LIMS2-215ENST00000484252 ANO2Q9NQ90 1003 aa23.97■■□□□ 1.43
LIMS2-215ENST00000484252 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
LIMS2-215ENST00000484252 LTN1O94822 1766 aa23.97■■□□□ 1.43
LIMS2-215ENST00000484252 PKNOX2Q96KN3 472 aa23.96■■□□□ 1.43
LIMS2-215ENST00000484252 NFAT5O94916 1531 aa23.95■■□□□ 1.42
LIMS2-215ENST00000484252 EIF4A1P60842 406 aaKnown RBP23.95■■□□□ 1.42
LIMS2-215ENST00000484252 ZSCAN23Q3MJ62 389 aa23.95■■□□□ 1.42
LIMS2-215ENST00000484252 CAVIN1Q6NZI2 390 aaKnown RBP23.95■■□□□ 1.42
LIMS2-215ENST00000484252 PHAXQ9H814 394 aaKnown RBP23.95■■□□□ 1.42
LIMS2-215ENST00000484252 NCLP19338 710 aaKnown RBP23.94■■□□□ 1.42
LIMS2-215ENST00000484252 ADGRL3Q9HAR2 1447 aa23.94■■□□□ 1.42
LIMS2-215ENST00000484252 PPP1R42Q7Z4L9 355 aa23.93■■□□□ 1.42
LIMS2-215ENST00000484252 USHBP1Q8N6Y0 703 aa23.93■■□□□ 1.42
LIMS2-215ENST00000484252 KDM3BQ7LBC6 1761 aa23.93■■□□□ 1.42
LIMS2-215ENST00000484252 PRPF40AO75400 957 aaKnown RBP23.93■■□□□ 1.42
LIMS2-215ENST00000484252 C14orf37Q86TY3 774 aa23.93■■□□□ 1.42
LIMS2-215ENST00000484252 PALD1Q9ULE6 856 aa23.93■■□□□ 1.42
LIMS2-215ENST00000484252 SURF6O75683 361 aaKnown RBP23.92■■□□□ 1.42
LIMS2-215ENST00000484252 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
LIMS2-215ENST00000484252 KIF1BPQ96EK5 621 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms