RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
UFD1-208ENST00000484101 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
UFD1-208ENST00000484101 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
UFD1-208ENST00000484101 COL18A1P39060 1754 aa12.19□□□□□ -0.46
UFD1-208ENST00000484101 CPDO75976 1380 aa12.18□□□□□ -0.46
UFD1-208ENST00000484101 HOXB7P09629 217 aa12.18□□□□□ -0.46
UFD1-208ENST00000484101 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
UFD1-208ENST00000484101 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
UFD1-208ENST00000484101 MCM10Q7L590 875 aa12.18□□□□□ -0.46
UFD1-208ENST00000484101 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
UFD1-208ENST00000484101 C8orf58Q8NAV2 365 aa12.18□□□□□ -0.46
UFD1-208ENST00000484101 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
UFD1-208ENST00000484101 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
UFD1-208ENST00000484101 IGHDP01880 384 aa12.17□□□□□ -0.46
UFD1-208ENST00000484101 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
UFD1-208ENST00000484101 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
UFD1-208ENST00000484101 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
UFD1-208ENST00000484101 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
UFD1-208ENST00000484101 RGPD5Q99666 1765 aa12.17□□□□□ -0.46
UFD1-208ENST00000484101 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
UFD1-208ENST00000484101 AKAP4Q5JQC9 854 aa12.16□□□□□ -0.46
UFD1-208ENST00000484101 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
UFD1-208ENST00000484101 PKD1L3Q7Z443 1732 aa12.16□□□□□ -0.46
UFD1-208ENST00000484101 ERBB3P21860 1342 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
UFD1-208ENST00000484101 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
UFD1-208ENST00000484101 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 LTV1Q96GA3 475 aaPredicted RBP12.15□□□□□ -0.46
UFD1-208ENST00000484101 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
UFD1-208ENST00000484101 SPATA31A3Q5VYP0 1347 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 GCC1Q96CN9 775 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 SLIT2O94813 1529 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 SCN11AQ9UI33 1791 aa12.14□□□□□ -0.47
UFD1-208ENST00000484101 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
UFD1-208ENST00000484101 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
UFD1-208ENST00000484101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.47
UFD1-208ENST00000484101 ZBTB7BO15156 539 aaPredicted RBP12.12□□□□□ -0.47
UFD1-208ENST00000484101 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
UFD1-208ENST00000484101 RGS3P49796 1198 aa12.12□□□□□ -0.47
UFD1-208ENST00000484101 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
UFD1-208ENST00000484101 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
UFD1-208ENST00000484101 IPO9Q96P70 1041 aaKnown RBP12.12□□□□□ -0.47
UFD1-208ENST00000484101 MRC1P22897 1456 aa12.11□□□□□ -0.47
UFD1-208ENST00000484101 ELL2O00472 640 aaPredicted RBP12.11□□□□□ -0.47
UFD1-208ENST00000484101 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
UFD1-208ENST00000484101 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
UFD1-208ENST00000484101 IL17REQ8NFR9 667 aa12.11□□□□□ -0.47
UFD1-208ENST00000484101 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
UFD1-208ENST00000484101 CEP350Q5VT06 3117 aa12.11□□□□□ -0.47
UFD1-208ENST00000484101 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
UFD1-208ENST00000484101 TEFQ10587 303 aa12.1□□□□□ -0.47
UFD1-208ENST00000484101 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
UFD1-208ENST00000484101 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
UFD1-208ENST00000484101 NUCB1Q02818 461 aa12.09□□□□□ -0.47
UFD1-208ENST00000484101 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
UFD1-208ENST00000484101 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
UFD1-208ENST00000484101 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
UFD1-208ENST00000484101 SPG7Q9UQ90 795 aa12.09□□□□□ -0.47
UFD1-208ENST00000484101 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.47
UFD1-208ENST00000484101 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
UFD1-208ENST00000484101 HMMRO75330 724 aa12.08□□□□□ -0.48
UFD1-208ENST00000484101 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
UFD1-208ENST00000484101 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
UFD1-208ENST00000484101 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
UFD1-208ENST00000484101 UPF2Q9HAU5 1272 aaKnown RBP12.08□□□□□ -0.48
UFD1-208ENST00000484101 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
UFD1-208ENST00000484101 TATP17735 454 aaPredicted RBP12.07□□□□□ -0.48
UFD1-208ENST00000484101 VPS72Q15906 364 aa12.07□□□□□ -0.48
UFD1-208ENST00000484101 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
UFD1-208ENST00000484101 ATP10DQ9P241 1426 aa12.06□□□□□ -0.48
UFD1-208ENST00000484101 GNAI3P08754 354 aa12.06□□□□□ -0.48
UFD1-208ENST00000484101 FLIIQ13045 1269 aa12.06□□□□□ -0.48
UFD1-208ENST00000484101 ANKRD44Q8N8A2 993 aa12.06□□□□□ -0.48
UFD1-208ENST00000484101 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
UFD1-208ENST00000484101 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
UFD1-208ENST00000484101 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 KCNA4P22459 653 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 EIF4A1P60842 406 aaKnown RBP12.05□□□□□ -0.48
UFD1-208ENST00000484101 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 CHD1LQ86WJ1 897 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 SPON1Q9HCB6 807 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
UFD1-208ENST00000484101 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
UFD1-208ENST00000484101 UTRNP46939 3433 aa12.04□□□□□ -0.48
UFD1-208ENST00000484101 BTBD11A6QL63 1104 aa12.04□□□□□ -0.48
UFD1-208ENST00000484101 CSB-PGBD3P0DP91 1061 aa12.04□□□□□ -0.48
UFD1-208ENST00000484101 ZC3H6P61129 1189 aaKnown RBP12.04□□□□□ -0.48
UFD1-208ENST00000484101 MYT1Q01538 1121 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms