RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 PCNTO95613 3336 aa12.14□□□□□ -0.47
RTFDC1-208ENST00000484084 EYA1Q99502 592 aa12.13□□□□□ -0.47
RTFDC1-208ENST00000484084 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
RTFDC1-208ENST00000484084 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
RTFDC1-208ENST00000484084 A0A0G2JLW4 131 aa12.12□□□□□ -0.47
RTFDC1-208ENST00000484084 GNPATO15228 680 aa12.12□□□□□ -0.47
RTFDC1-208ENST00000484084 PHKG2P15735 406 aa12.12□□□□□ -0.47
RTFDC1-208ENST00000484084 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
RTFDC1-208ENST00000484084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.478e-10■□□□□ 9.4
RTFDC1-208ENST00000484084 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 MYH14Q7Z406 1995 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 TOMM70O94826 608 aa12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 TGFB2P61812 414 aa12.11□□□□□ -0.47
RTFDC1-208ENST00000484084 ARFGEF1Q9Y6D6 1849 aa12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 GYS1P13807 737 aa12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 DPEP1P16444 411 aa12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 APLP1P51693 650 aa12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
RTFDC1-208ENST00000484084 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
RTFDC1-208ENST00000484084 TMF1P82094 1093 aa12.09□□□□□ -0.47
RTFDC1-208ENST00000484084 HTRA3P83110 453 aa12.09□□□□□ -0.47
RTFDC1-208ENST00000484084 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
RTFDC1-208ENST00000484084 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
RTFDC1-208ENST00000484084 BCS1LQ9Y276 419 aa12.08□□□□□ -0.48
RTFDC1-208ENST00000484084 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-208ENST00000484084 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-208ENST00000484084 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
RTFDC1-208ENST00000484084 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
RTFDC1-208ENST00000484084 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
RTFDC1-208ENST00000484084 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
RTFDC1-208ENST00000484084 TJP1Q07157 1748 aa12.06□□□□□ -0.48
RTFDC1-208ENST00000484084 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-208ENST00000484084 COL13A1Q5TAT6 717 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-208ENST00000484084 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-208ENST00000484084 ARHGAP27Q6ZUM4 889 aa12.06□□□□□ -0.48
RTFDC1-208ENST00000484084 SBF1O95248 1867 aa12.06□□□□□ -0.48
RTFDC1-208ENST00000484084 PLEKHG2Q9H7P9 1386 aa12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 RPS6KA4O75676 772 aa12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 DDR1Q08345 913 aa12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
RTFDC1-208ENST00000484084 ERVV-2B6SEH9 535 aa12.04□□□□□ -0.48
RTFDC1-208ENST00000484084 ADRA2BP18089 450 aa12.04□□□□□ -0.48
RTFDC1-208ENST00000484084 PRELPP51888 382 aa12.04□□□□□ -0.48
RTFDC1-208ENST00000484084 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
RTFDC1-208ENST00000484084 FCHSD2O94868 740 aa12.03□□□□□ -0.48
RTFDC1-208ENST00000484084 FKBP8Q14318 412 aa12.03□□□□□ -0.48
RTFDC1-208ENST00000484084 KLRG1Q96E93 195 aa12.03□□□□□ -0.48
RTFDC1-208ENST00000484084 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-208ENST00000484084 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
RTFDC1-208ENST00000484084 TNRC6CQ9HCJ0 1690 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 NRXN2Q9P2S2 1712 aa12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 TM4SF1P30408 202 aa12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 CHRNA5P30532 468 aa12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-208ENST00000484084 POLRMTO00411 1230 aaKnown RBP12□□□□□ -0.49
RTFDC1-208ENST00000484084 RFC4P35249 363 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
RTFDC1-208ENST00000484084 FSTL1Q12841 308 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 CDCA8Q53HL2 280 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 RRAGCQ9HB90 399 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 PIM2Q9P1W9 311 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
RTFDC1-208ENST00000484084 DLEC1Q9Y238 1755 aa11.99□□□□□ -0.49
RTFDC1-208ENST00000484084 AFDNP55196 1824 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-208ENST00000484084 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
RTFDC1-208ENST00000484084 PTCD1O75127 700 aaKnown RBP11.98□□□□□ -0.49
RTFDC1-208ENST00000484084 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
RTFDC1-208ENST00000484084 DALRD3Q5D0E6 543 aaKnown RBP11.98□□□□□ -0.49
RTFDC1-208ENST00000484084 NFATC2IPQ8NCF5 419 aa11.98□□□□□ -0.49
RTFDC1-208ENST00000484084 POTECB2RU33 542 aa11.97□□□□□ -0.49
RTFDC1-208ENST00000484084 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
RTFDC1-208ENST00000484084 RNF181Q9P0P0 153 aa11.97□□□□□ -0.49
RTFDC1-208ENST00000484084 HSP90AB1P08238 724 aaKnown RBP11.96□□□□□ -0.49
RTFDC1-208ENST00000484084 CABP4P57796 275 aa11.96□□□□□ -0.49
RTFDC1-208ENST00000484084 RASSF7Q02833 373 aa11.96□□□□□ -0.49
RTFDC1-208ENST00000484084 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
RTFDC1-208ENST00000484084 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-208ENST00000484084 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
RTFDC1-208ENST00000484084 MTHFSP49914 203 aa11.95□□□□□ -0.5
RTFDC1-208ENST00000484084 PLEKHO1Q53GL0 409 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-208ENST00000484084 MRC1P22897 1456 aa11.95□□□□□ -0.5
RTFDC1-208ENST00000484084 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
RTFDC1-208ENST00000484084 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
RTFDC1-208ENST00000484084 NFIXQ14938 502 aa11.94□□□□□ -0.5
RTFDC1-208ENST00000484084 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
RTFDC1-208ENST00000484084 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
RTFDC1-208ENST00000484084 DNAJC10Q8IXB1 793 aa11.94□□□□□ -0.5
RTFDC1-208ENST00000484084 CYP19A1P11511 503 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-208ENST00000484084 IL13P35225 146 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms