RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
RXRB-205ENST00000483821 CYP27B1O15528 508 aa17.09■□□□□ 0.33
RXRB-205ENST00000483821 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
RXRB-205ENST00000483821 SLC52A2Q9HAB3 445 aa17.09■□□□□ 0.33
RXRB-205ENST00000483821 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
RXRB-205ENST00000483821 ERVV-2B6SEH9 535 aa17.08■□□□□ 0.32
RXRB-205ENST00000483821 TRIM27P14373 513 aa17.08■□□□□ 0.32
RXRB-205ENST00000483821 CABP4P57796 275 aa17.08■□□□□ 0.32
RXRB-205ENST00000483821 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
RXRB-205ENST00000483821 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
RXRB-205ENST00000483821 B4GALNT3Q6L9W6 998 aa17.08■□□□□ 0.32
RXRB-205ENST00000483821 PTPRCP08575 1304 aa17.07■□□□□ 0.32
RXRB-205ENST00000483821 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
RXRB-205ENST00000483821 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
RXRB-205ENST00000483821 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
RXRB-205ENST00000483821 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
RXRB-205ENST00000483821 KRT24Q2M2I5 525 aa17.06■□□□□ 0.32
RXRB-205ENST00000483821 ADAMTS7Q9UKP4 1686 aa17.06■□□□□ 0.32
RXRB-205ENST00000483821 EXOC5O00471 708 aa17.05■□□□□ 0.32
RXRB-205ENST00000483821 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
RXRB-205ENST00000483821 DDX54Q8TDD1 881 aaKnown RBP17.05■□□□□ 0.32
RXRB-205ENST00000483821 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
RXRB-205ENST00000483821 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
RXRB-205ENST00000483821 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
RXRB-205ENST00000483821 UNC5CLQ8IV45 518 aa17.04■□□□□ 0.32
RXRB-205ENST00000483821 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
RXRB-205ENST00000483821 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
RXRB-205ENST00000483821 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
RXRB-205ENST00000483821 SLIT2O94813 1529 aa17.03■□□□□ 0.32
RXRB-205ENST00000483821 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
RXRB-205ENST00000483821 ZNF790Q6PG37 636 aa17.03■□□□□ 0.32
RXRB-205ENST00000483821 ITPRIPQ8IWB1 547 aa17.03■□□□□ 0.32
RXRB-205ENST00000483821 SPATA31A5Q5VU36 1347 aa17.02■□□□□ 0.32
RXRB-205ENST00000483821 SPATA31A7Q8IWB4 1347 aa17.02■□□□□ 0.32
RXRB-205ENST00000483821 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
RXRB-205ENST00000483821 RLBP1P12271 317 aa17.02■□□□□ 0.32
RXRB-205ENST00000483821 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
RXRB-205ENST00000483821 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.32
RXRB-205ENST00000483821 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
RXRB-205ENST00000483821 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
RXRB-205ENST00000483821 MRC1P22897 1456 aa17.01■□□□□ 0.31
RXRB-205ENST00000483821 SCN11AQ9UI33 1791 aa17.01■□□□□ 0.31
RXRB-205ENST00000483821 PLCH1Q4KWH8 1693 aa17.01■□□□□ 0.31
RXRB-205ENST00000483821 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
RXRB-205ENST00000483821 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
RXRB-205ENST00000483821 HSPA1LP34931 641 aa17■□□□□ 0.31
RXRB-205ENST00000483821 FNBP4Q8N3X1 1017 aaPredicted RBP17■□□□□ 0.31
RXRB-205ENST00000483821 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
RXRB-205ENST00000483821 C8orf37Q96NL8 207 aa17■□□□□ 0.31
RXRB-205ENST00000483821 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
RXRB-205ENST00000483821 HEG1Q9ULI3 1381 aa17■□□□□ 0.31
RXRB-205ENST00000483821 ABCC4O15439 1325 aa16.99■□□□□ 0.31
RXRB-205ENST00000483821 KCNQ3O43525 872 aa16.99■□□□□ 0.31
RXRB-205ENST00000483821 VPS72Q15906 364 aa16.99■□□□□ 0.31
RXRB-205ENST00000483821 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
RXRB-205ENST00000483821 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
RXRB-205ENST00000483821 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
RXRB-205ENST00000483821 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
RXRB-205ENST00000483821 DBF4Q9UBU7 674 aaPredicted RBP16.98■□□□□ 0.31
RXRB-205ENST00000483821 TNNQ9UQP3 1299 aa16.98■□□□□ 0.31
RXRB-205ENST00000483821 CCT4P50991 539 aaKnown RBP16.97■□□□□ 0.31
RXRB-205ENST00000483821 DDB1Q16531 1140 aa16.97■□□□□ 0.31
RXRB-205ENST00000483821 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
RXRB-205ENST00000483821 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
RXRB-205ENST00000483821 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
RXRB-205ENST00000483821 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
RXRB-205ENST00000483821 NRAPQ86VF7 1730 aa16.96■□□□□ 0.31
RXRB-205ENST00000483821 FLIIQ13045 1269 aa16.96■□□□□ 0.31
RXRB-205ENST00000483821 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
RXRB-205ENST00000483821 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
RXRB-205ENST00000483821 FKBP5Q13451 457 aaPredicted RBP16.95■□□□□ 0.3
RXRB-205ENST00000483821 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
RXRB-205ENST00000483821 USP21Q9UK80 565 aa16.95■□□□□ 0.3
RXRB-205ENST00000483821 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
RXRB-205ENST00000483821 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
RXRB-205ENST00000483821 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
RXRB-205ENST00000483821 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
RXRB-205ENST00000483821 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
RXRB-205ENST00000483821 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
RXRB-205ENST00000483821 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
RXRB-205ENST00000483821 ZBTB7BO15156 539 aaPredicted RBP16.92■□□□□ 0.3
RXRB-205ENST00000483821 DDX58O95786 925 aaKnown RBP16.92■□□□□ 0.3
RXRB-205ENST00000483821 G2E3Q7L622 706 aa16.92■□□□□ 0.3
RXRB-205ENST00000483821 TEX13AQ9BXU3 409 aaPredicted RBP16.92■□□□□ 0.3
RXRB-205ENST00000483821 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
RXRB-205ENST00000483821 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
RXRB-205ENST00000483821 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
RXRB-205ENST00000483821 LRP6O75581 1613 aa16.9■□□□□ 0.3
RXRB-205ENST00000483821 RGS12O14924 1447 aa16.89■□□□□ 0.29
RXRB-205ENST00000483821 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
RXRB-205ENST00000483821 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
RXRB-205ENST00000483821 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
RXRB-205ENST00000483821 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
RXRB-205ENST00000483821 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
RXRB-205ENST00000483821 PIGBQ92521 554 aa16.88■□□□□ 0.29
RXRB-205ENST00000483821 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
RXRB-205ENST00000483821 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
RXRB-205ENST00000483821 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
RXRB-205ENST00000483821 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
RXRB-205ENST00000483821 GNAI3P08754 354 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms