RNA–Protein interactions for RNA: ENST00000483532.1

TUBGCP3-206, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 5

Gene TUBGCP3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-206ENST00000483532 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.37
TUBGCP3-206ENST00000483532 MAP2P11137 1827 aaKnown RBP17.39■□□□□ 0.37
TUBGCP3-206ENST00000483532 ITGB4P16144 1822 aa17.38■□□□□ 0.37
TUBGCP3-206ENST00000483532 POLKQ9UBT6 870 aa17.38■□□□□ 0.37
TUBGCP3-206ENST00000483532 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
TUBGCP3-206ENST00000483532 KIF3CO14782 793 aa17.37■□□□□ 0.37
TUBGCP3-206ENST00000483532 TGFB2P61812 414 aa17.37■□□□□ 0.37
TUBGCP3-206ENST00000483532 NLGN1Q8N2Q7 840 aa17.37■□□□□ 0.37
TUBGCP3-206ENST00000483532 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
TUBGCP3-206ENST00000483532 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
TUBGCP3-206ENST00000483532 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
TUBGCP3-206ENST00000483532 A0A0G2JLW4 131 aa17.35■□□□□ 0.37
TUBGCP3-206ENST00000483532 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
TUBGCP3-206ENST00000483532 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
TUBGCP3-206ENST00000483532 RFC4P35249 363 aa17.34■□□□□ 0.37
TUBGCP3-206ENST00000483532 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
TUBGCP3-206ENST00000483532 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
TUBGCP3-206ENST00000483532 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
TUBGCP3-206ENST00000483532 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
TUBGCP3-206ENST00000483532 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.36
TUBGCP3-206ENST00000483532 RC3H1Q5TC82 1133 aaKnown RBP17.33■□□□□ 0.36
TUBGCP3-206ENST00000483532 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.36
TUBGCP3-206ENST00000483532 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.36
TUBGCP3-206ENST00000483532 ADRA2BP18089 450 aa17.32■□□□□ 0.36
TUBGCP3-206ENST00000483532 PARP3Q9Y6F1 533 aa17.32■□□□□ 0.36
TUBGCP3-206ENST00000483532 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 TOMM70O94826 608 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 FCHSD2O94868 740 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 APLP1P51693 650 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 CABP4P57796 275 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 SLC4A9Q96Q91 983 aa17.31■□□□□ 0.36
TUBGCP3-206ENST00000483532 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
TUBGCP3-206ENST00000483532 DPEP1P16444 411 aa17.3■□□□□ 0.36
TUBGCP3-206ENST00000483532 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
TUBGCP3-206ENST00000483532 GYS1P13807 737 aa17.29■□□□□ 0.36
TUBGCP3-206ENST00000483532 CNTNAP4Q9C0A0 1308 aa17.28■□□□□ 0.36
TUBGCP3-206ENST00000483532 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
TUBGCP3-206ENST00000483532 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
TUBGCP3-206ENST00000483532 PANK3Q9H999 370 aa17.28■□□□□ 0.36
TUBGCP3-206ENST00000483532 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
TUBGCP3-206ENST00000483532 MTHFSP49914 203 aa17.27■□□□□ 0.36
TUBGCP3-206ENST00000483532 EIF4G2P78344 907 aaKnown RBP eCLIP17.27■□□□□ 0.36
TUBGCP3-206ENST00000483532 KDRP35968 1356 aa17.27■□□□□ 0.35
TUBGCP3-206ENST00000483532 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
TUBGCP3-206ENST00000483532 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
TUBGCP3-206ENST00000483532 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
TUBGCP3-206ENST00000483532 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
TUBGCP3-206ENST00000483532 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
TUBGCP3-206ENST00000483532 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
TUBGCP3-206ENST00000483532 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
TUBGCP3-206ENST00000483532 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
TUBGCP3-206ENST00000483532 KCNA3P22001 575 aa17.24■□□□□ 0.35
TUBGCP3-206ENST00000483532 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
TUBGCP3-206ENST00000483532 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
TUBGCP3-206ENST00000483532 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
TUBGCP3-206ENST00000483532 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
TUBGCP3-206ENST00000483532 DNAJC5GQ8N7S2 189 aa17.23■□□□□ 0.35
TUBGCP3-206ENST00000483532 FKBP8Q14318 412 aa17.22■□□□□ 0.35
TUBGCP3-206ENST00000483532 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
TUBGCP3-206ENST00000483532 SRP68Q9UHB9 627 aaKnown RBP17.22■□□□□ 0.35
TUBGCP3-206ENST00000483532 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
TUBGCP3-206ENST00000483532 RBM46Q8TBY0 533 aaKnown RBP17.21■□□□□ 0.35
TUBGCP3-206ENST00000483532 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
TUBGCP3-206ENST00000483532 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
TUBGCP3-206ENST00000483532 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
TUBGCP3-206ENST00000483532 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
TUBGCP3-206ENST00000483532 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
TUBGCP3-206ENST00000483532 USP42Q9H9J4 1324 aaKnown RBP17.2■□□□□ 0.34
TUBGCP3-206ENST00000483532 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
TUBGCP3-206ENST00000483532 C4AP0C0L4 1744 aa17.18■□□□□ 0.34
TUBGCP3-206ENST00000483532 ZPR1O75312 459 aa17.18■□□□□ 0.34
TUBGCP3-206ENST00000483532 CHRNA5P30532 468 aa17.18■□□□□ 0.34
TUBGCP3-206ENST00000483532 DDR1Q08345 913 aa17.18■□□□□ 0.34
TUBGCP3-206ENST00000483532 FSTL1Q12841 308 aa17.17■□□□□ 0.34
TUBGCP3-206ENST00000483532 INTS5Q6P9B9 1019 aaKnown RBP17.17■□□□□ 0.34
TUBGCP3-206ENST00000483532 RRAGCQ9HB90 399 aa17.17■□□□□ 0.34
TUBGCP3-206ENST00000483532 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
TUBGCP3-206ENST00000483532 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
TUBGCP3-206ENST00000483532 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
TUBGCP3-206ENST00000483532 TM4SF1P30408 202 aa17.16■□□□□ 0.34
TUBGCP3-206ENST00000483532 POLRMTO00411 1230 aaKnown RBP17.15■□□□□ 0.34
TUBGCP3-206ENST00000483532 HTRA3P83110 453 aa17.15■□□□□ 0.34
TUBGCP3-206ENST00000483532 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
TUBGCP3-206ENST00000483532 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
TUBGCP3-206ENST00000483532 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.33
TUBGCP3-206ENST00000483532 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
TUBGCP3-206ENST00000483532 KLRG1Q96E93 195 aa17.14■□□□□ 0.33
TUBGCP3-206ENST00000483532 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
TUBGCP3-206ENST00000483532 IL13P35225 146 aa17.13■□□□□ 0.33
TUBGCP3-206ENST00000483532 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
TUBGCP3-206ENST00000483532 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
TUBGCP3-206ENST00000483532 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
TUBGCP3-206ENST00000483532 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
TUBGCP3-206ENST00000483532 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
TUBGCP3-206ENST00000483532 SLC39A6Q13433 755 aa17.11■□□□□ 0.33
TUBGCP3-206ENST00000483532 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
TUBGCP3-206ENST00000483532 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-206ENST00000483532 NFIXQ14938 502 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms