RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PTPREP23469 700 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 SEC13P55735 322 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 NCOA4Q13772 614 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 METTL16Q86W50 562 aaKnown RBP6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 OGFOD1Q8N543 542 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 GTF3C2Q8WUA4 911 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 RBCK1Q9BYM8 510 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 SLKQ9H2G2 1235 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 CCDC194A0A1B0GVG4 234 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 FAM13AO94988 1023 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 GCGRP47871 477 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 SLC4A3P48751 1232 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PRR20EP86478 221 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PRR20CP86479 221 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PRR20DP86480 221 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PRR20BP86481 221 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PRR20AP86496 221 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 FANCCQ00597 558 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PSMD2Q13200 908 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 TJAP1Q5JTD0 557 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 TMED8Q6PL24 325 aaPredicted RBP6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 TMC4Q7Z404 712 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 EPS8L1Q8TE68 723 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 ZDHHC16Q969W1 377 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 EYA1Q99502 592 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 TMEM134Q9H6X4 195 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 INPP5FQ9Y2H2 1132 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PRKAB1Q9Y478 270 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 COL4A3BPQ9Y5P4 624 aa6.91□□□□□ -1.3
R3HDM1-216ENST00000483065 PPP1R3GB7ZBB8 358 aa6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 PRMT3O60678 531 aa6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 P4HBP07237 508 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 PSME1Q06323 249 aa6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 GEMIN8Q9NWZ8 242 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 CHPF2Q9P2E5 772 aa6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 GMPR2Q9P2T1 348 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-216ENST00000483065 DNAJC6O75061 913 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 S100BP04271 92 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 LDHBP07195 334 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 FBXO45P0C2W1 286 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 XRCC5P13010 732 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 NBPF6Q5VWK0 638 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 PLPP7Q8NBV4 271 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 NBPF4Q96M43 638 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 DMRTB1Q96MA1 342 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 SPC25Q9HBM1 224 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 FAN1Q9Y2M0 1017 aa6.89□□□□□ -1.31
R3HDM1-216ENST00000483065 CFAP99D6REC4 459 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 PEX14O75381 377 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 PARNO95453 639 aaKnown RBP6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 GSK3AP49840 483 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 ARHGAP4P98171 946 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 FMR1Q06787 632 aaKnown RBP eCLIP6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 PDE3BQ13370 1112 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 RALBP1Q15311 655 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 FILIP1Q7Z7B0 1213 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 CKAP2LQ8IYA6 745 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 NLGN1Q8N2Q7 840 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 TMC1Q8TDI8 760 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 ZNF594Q96JF6 807 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 SLC52A1Q9NWF4 448 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 DACH1Q9UI36 760 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 PCDHGC3Q9UN70 934 aa6.88□□□□□ -1.31
R3HDM1-216ENST00000483065 U2SURPO15042 1029 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 PTMSP20962 102 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 DAB2P98082 770 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 DESI1Q6ICB0 168 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 SIX5Q8N196 739 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 ACBD3Q9H3P7 528 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 PIF1Q9H611 641 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 CYLDQ9NQC7 956 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
R3HDM1-216ENST00000483065 ENPP3O14638 875 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 TREHO43280 583 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 BMS1Q14692 1282 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 LAPTM4BQ86VI4 370 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 PRPF38AQ8NAV1 312 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 COL26A1Q96A83 441 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 ZFRQ96KR1 1074 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 CEP126Q9P2H0 1117 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
R3HDM1-216ENST00000483065 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 MAFGO15525 162 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 MAP4K4O95819 1239 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 OCLNQ16625 522 aa6.85□□□□□ -1.31
R3HDM1-216ENST00000483065 SPTY2D1Q68D10 685 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms