RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 DOC2BQ14184 412 aa7.07□□□□□ -1.28
SNX27-205ENST00000482791 GRIN2CQ14957 1233 aa7.07□□□□□ -1.28
SNX27-205ENST00000482791 DZIP3Q86Y13 1208 aaKnown RBP7.07□□□□□ -1.28
SNX27-205ENST00000482791 SEPT12Q8IYM1 358 aa7.07□□□□□ -1.28
SNX27-205ENST00000482791 TRIM52Q96A61 297 aa7.07□□□□□ -1.28
SNX27-205ENST00000482791 COG6Q9Y2V7 657 aa7.07□□□□□ -1.28
SNX27-205ENST00000482791 RAD21O60216 631 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 IRF5Q13568 498 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 WWC1Q8IX03 1113 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 KLRG1Q96E93 195 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 GAS2L1Q99501 681 aaPredicted RBP7.06□□□□□ -1.28
SNX27-205ENST00000482791 GDPD2Q9HCC8 539 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 DYRK1BQ9Y463 629 aa7.06□□□□□ -1.28
SNX27-205ENST00000482791 ESPNB1AK53 854 aa7.05□□□□□ -1.28
SNX27-205ENST00000482791 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
SNX27-205ENST00000482791 ZMYM1Q5SVZ6 1142 aa7.05□□□□□ -1.28
SNX27-205ENST00000482791 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
SNX27-205ENST00000482791 SOX11P35716 441 aa7.04□□□□□ -1.28
SNX27-205ENST00000482791 RRAGCQ9HB90 399 aa7.04□□□□□ -1.28
SNX27-205ENST00000482791 CYLDQ9NQC7 956 aa7.04□□□□□ -1.28
SNX27-205ENST00000482791 C2CD2LO14523 706 aa7.03□□□□□ -1.28
SNX27-205ENST00000482791 ABL2P42684 1182 aa7.03□□□□□ -1.28
SNX27-205ENST00000482791 EIF4G2P78344 907 aaKnown RBP eCLIP7.03□□□□□ -1.28
SNX27-205ENST00000482791 UBAP2LQ14157 1087 aaKnown RBP7.03□□□□□ -1.28
SNX27-205ENST00000482791 RNF20Q5VTR2 975 aa7.03□□□□□ -1.28
SNX27-205ENST00000482791 EDARADDQ8WWZ3 215 aa7.03□□□□□ -1.28
SNX27-205ENST00000482791 PCDHB9Q9Y5E1 797 aa7.03□□□□□ -1.28
SNX27-205ENST00000482791 ALYREFQ86V81 257 aaKnown RBP7.02□□□□□ -1.29
SNX27-205ENST00000482791 TRERF1Q96PN7 1200 aa7.01□□□□□ -1.29
SNX27-205ENST00000482791 A0A1W2PRU2 124 aa7□□□□□ -1.29
SNX27-205ENST00000482791 A6NJR5 290 aa7□□□□□ -1.29
SNX27-205ENST00000482791 MEN1O00255 615 aa7□□□□□ -1.29
SNX27-205ENST00000482791 NBPF10Q6P3W6 841 aaKnown RBP7□□□□□ -1.29
SNX27-205ENST00000482791 NBPF15Q8N660 670 aa7□□□□□ -1.29
SNX27-205ENST00000482791 GRIP2Q9C0E4 1043 aa7□□□□□ -1.29
SNX27-205ENST00000482791 NUCKS1Q9H1E3 243 aaKnown RBP7□□□□□ -1.29
SNX27-205ENST00000482791 H7C1W4 665 aa6.99□□□□□ -1.29
SNX27-205ENST00000482791 MAP2K3P46734 347 aa6.99□□□□□ -1.29
SNX27-205ENST00000482791 POM121Q96HA1 1249 aa6.99□□□□□ -1.29
SNX27-205ENST00000482791 VAC14Q08AM6 782 aa6.98□□□□□ -1.29
SNX27-205ENST00000482791 RSPO4Q2I0M5 234 aaPredicted RBP6.98□□□□□ -1.29
SNX27-205ENST00000482791 GIGYF1O75420 1035 aaPredicted RBP6.97□□□□□ -1.29
SNX27-205ENST00000482791 PROSER2Q86WR7 435 aaPredicted RBP6.97□□□□□ -1.29
SNX27-205ENST00000482791 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
SNX27-205ENST00000482791 CEP126Q9P2H0 1117 aa6.97□□□□□ -1.29
SNX27-205ENST00000482791 ATP5J2-PTCD1G3V325 749 aa6.96□□□□□ -1.3
SNX27-205ENST00000482791 GPC1P35052 558 aa6.96□□□□□ -1.3
SNX27-205ENST00000482791 FNBP4Q8N3X1 1017 aaPredicted RBP6.96□□□□□ -1.3
SNX27-205ENST00000482791 BTBD6Q96KE9 485 aa6.96□□□□□ -1.3
SNX27-205ENST00000482791 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
SNX27-205ENST00000482791 GTF3C3Q9Y5Q9 886 aa6.96□□□□□ -1.3
SNX27-205ENST00000482791 BTBD11A6QL63 1104 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 GNB5O14775 395 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 F11P03951 625 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 DGKGP49619 791 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 SEMA3FQ13275 785 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 NKAPLQ5M9Q1 402 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 GGA1Q9UJY5 639 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 CHIC2Q9UKJ5 165 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 HCN2Q9UL51 889 aa6.95□□□□□ -1.3
SNX27-205ENST00000482791 SPATA31C2B4DYI2 1134 aa6.94□□□□□ -1.3
SNX27-205ENST00000482791 ERVK-9P63128 1117 aa6.94□□□□□ -1.3
SNX27-205ENST00000482791 CTBSQ01459 385 aa6.94□□□□□ -1.3
SNX27-205ENST00000482791 PHTF2Q8N3S3 785 aa6.94□□□□□ -1.3
SNX27-205ENST00000482791 ALG2Q9H553 416 aa6.94□□□□□ -1.3
SNX27-205ENST00000482791 TIMMDC1Q9NPL8 285 aa6.94□□□□□ -1.3
SNX27-205ENST00000482791 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
SNX27-205ENST00000482791 ARTNQ5T4W7 220 aa6.93□□□□□ -1.3
SNX27-205ENST00000482791 NFATC2IPQ8NCF5 419 aa6.93□□□□□ -1.3
SNX27-205ENST00000482791 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
SNX27-205ENST00000482791 GPAMQ9HCL2 828 aa6.93□□□□□ -1.3
SNX27-205ENST00000482791 GDF2Q9UK05 429 aaPredicted RBP6.93□□□□□ -1.3
SNX27-205ENST00000482791 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 AMPD1P23109 780 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 MAP7D1Q3KQU3 841 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 SLC27A3Q5K4L6 730 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 CC2D2BQ6DHV5 1058 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 SLCO4C1Q6ZQN7 724 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 RNF135Q8IUD6 432 aa6.92□□□□□ -1.3
SNX27-205ENST00000482791 EPXP11678 715 aa6.91□□□□□ -1.3
SNX27-205ENST00000482791 SCTRP47872 440 aa6.91□□□□□ -1.3
SNX27-205ENST00000482791 GOLGA6L1Q8N7Z2 621 aa6.91□□□□□ -1.3
SNX27-205ENST00000482791 NDFIP2Q9NV92 336 aa6.91□□□□□ -1.3
SNX27-205ENST00000482791 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
SNX27-205ENST00000482791 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
SNX27-205ENST00000482791 WASLO00401 505 aaPredicted RBP6.9□□□□□ -1.3
SNX27-205ENST00000482791 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
SNX27-205ENST00000482791 SIRT1Q96EB6 747 aa6.9□□□□□ -1.3
SNX27-205ENST00000482791 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
SNX27-205ENST00000482791 ABHD17AQ96GS6 310 aa6.9□□□□□ -1.3
SNX27-205ENST00000482791 CCDC85AQ96PX6 553 aaPredicted RBP6.9□□□□□ -1.3
SNX27-205ENST00000482791 ZFP64Q9NPA5 681 aa6.9□□□□□ -1.3
SNX27-205ENST00000482791 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
SNX27-205ENST00000482791 TIMELESSQ9UNS1 1208 aa6.9□□□□□ -1.3
SNX27-205ENST00000482791 TRAK2O60296 914 aa6.89□□□□□ -1.31
SNX27-205ENST00000482791 PHKA2P46019 1235 aa6.89□□□□□ -1.31
SNX27-205ENST00000482791 CLN3Q13286 438 aa6.89□□□□□ -1.31
SNX27-205ENST00000482791 WDR44Q5JSH3 913 aa6.89□□□□□ -1.31
SNX27-205ENST00000482791 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms