RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
TMEM54-206ENST00000482771 TGFB2P61812 414 aa17.73■□□□□ 0.43
TMEM54-206ENST00000482771 BCS1LQ9Y276 419 aa17.73■□□□□ 0.43
TMEM54-206ENST00000482771 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
TMEM54-206ENST00000482771 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
TMEM54-206ENST00000482771 UBR3Q6ZT12 1888 aa17.72■□□□□ 0.43
TMEM54-206ENST00000482771 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
TMEM54-206ENST00000482771 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
TMEM54-206ENST00000482771 ARHGEF1Q92888 912 aaKnown RBP17.72■□□□□ 0.43
TMEM54-206ENST00000482771 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
TMEM54-206ENST00000482771 ERVV-2B6SEH9 535 aa17.71■□□□□ 0.43
TMEM54-206ENST00000482771 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
TMEM54-206ENST00000482771 RC3H1Q5TC82 1133 aaKnown RBP17.7■□□□□ 0.42
TMEM54-206ENST00000482771 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
TMEM54-206ENST00000482771 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
TMEM54-206ENST00000482771 DPEP1P16444 411 aa17.69■□□□□ 0.42
TMEM54-206ENST00000482771 RFC4P35249 363 aa17.69■□□□□ 0.42
TMEM54-206ENST00000482771 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
TMEM54-206ENST00000482771 RPS6KA4O75676 772 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 FCHSD2O94868 740 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 GYS1P13807 737 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 CABP4P57796 275 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
TMEM54-206ENST00000482771 DCAF5Q96JK2 942 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
TMEM54-206ENST00000482771 TOMM70O94826 608 aa17.67■□□□□ 0.42
TMEM54-206ENST00000482771 HSP90AB1P08238 724 aaKnown RBP17.67■□□□□ 0.42
TMEM54-206ENST00000482771 ADRA2BP18089 450 aa17.67■□□□□ 0.42
TMEM54-206ENST00000482771 APLP1P51693 650 aa17.67■□□□□ 0.42
TMEM54-206ENST00000482771 PXDNLA1KZ92 1463 aa17.66■□□□□ 0.42
TMEM54-206ENST00000482771 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
TMEM54-206ENST00000482771 KCNA3P22001 575 aa17.64■□□□□ 0.41
TMEM54-206ENST00000482771 MTHFSP49914 203 aa17.64■□□□□ 0.41
TMEM54-206ENST00000482771 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
TMEM54-206ENST00000482771 DNAJC5GQ8N7S2 189 aa17.64■□□□□ 0.41
TMEM54-206ENST00000482771 NMRK2Q9NPI5 230 aa17.64■□□□□ 0.41
TMEM54-206ENST00000482771 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.41
TMEM54-206ENST00000482771 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
TMEM54-206ENST00000482771 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
TMEM54-206ENST00000482771 KDRP35968 1356 aa17.63■□□□□ 0.41
TMEM54-206ENST00000482771 C9orf131Q5VYM1 1079 aa17.62■□□□□ 0.41
TMEM54-206ENST00000482771 PIM2Q9P1W9 311 aa17.62■□□□□ 0.41
TMEM54-206ENST00000482771 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
TMEM54-206ENST00000482771 PANK3Q9H999 370 aa17.61■□□□□ 0.41
TMEM54-206ENST00000482771 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
TMEM54-206ENST00000482771 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
TMEM54-206ENST00000482771 FKBP8Q14318 412 aa17.6■□□□□ 0.41
TMEM54-206ENST00000482771 DALRD3Q5D0E6 543 aaKnown RBP17.6■□□□□ 0.41
TMEM54-206ENST00000482771 C1orf141Q5JVX7 400 aa17.6■□□□□ 0.41
TMEM54-206ENST00000482771 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
TMEM54-206ENST00000482771 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
TMEM54-206ENST00000482771 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
TMEM54-206ENST00000482771 TRIM26Q12899 539 aaPredicted RBP17.59■□□□□ 0.41
TMEM54-206ENST00000482771 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
TMEM54-206ENST00000482771 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
TMEM54-206ENST00000482771 PLEKHG2Q9H7P9 1386 aa17.58■□□□□ 0.4
TMEM54-206ENST00000482771 CHRNA5P30532 468 aa17.57■□□□□ 0.4
TMEM54-206ENST00000482771 DDR1Q08345 913 aa17.57■□□□□ 0.4
TMEM54-206ENST00000482771 SULT6B1Q6IMI4 303 aa17.57■□□□□ 0.4
TMEM54-206ENST00000482771 MORC1Q86VD1 984 aa17.57■□□□□ 0.4
TMEM54-206ENST00000482771 RBM46Q8TBY0 533 aaKnown RBP17.57■□□□□ 0.4
TMEM54-206ENST00000482771 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
TMEM54-206ENST00000482771 KDM6AO15550 1401 aaPredicted RBP17.56■□□□□ 0.4
TMEM54-206ENST00000482771 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
TMEM54-206ENST00000482771 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
TMEM54-206ENST00000482771 RNF181Q9P0P0 153 aa17.56■□□□□ 0.4
TMEM54-206ENST00000482771 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
TMEM54-206ENST00000482771 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
TMEM54-206ENST00000482771 TM4SF1P30408 202 aa17.55■□□□□ 0.4
TMEM54-206ENST00000482771 HTRA3P83110 453 aa17.55■□□□□ 0.4
TMEM54-206ENST00000482771 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
TMEM54-206ENST00000482771 ZPR1O75312 459 aa17.54■□□□□ 0.4
TMEM54-206ENST00000482771 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
TMEM54-206ENST00000482771 C4AP0C0L4 1744 aa17.53■□□□□ 0.4
TMEM54-206ENST00000482771 KIAA1551Q9HCM1 1747 aa17.53■□□□□ 0.4
TMEM54-206ENST00000482771 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
TMEM54-206ENST00000482771 DNAJC10Q8IXB1 793 aa17.53■□□□□ 0.4
TMEM54-206ENST00000482771 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
TMEM54-206ENST00000482771 IL13P35225 146 aa17.52■□□□□ 0.4
TMEM54-206ENST00000482771 EIF4G2P78344 907 aaKnown RBP eCLIP17.52■□□□□ 0.4
TMEM54-206ENST00000482771 FSTL1Q12841 308 aa17.52■□□□□ 0.4
TMEM54-206ENST00000482771 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
TMEM54-206ENST00000482771 LGR6Q9HBX8 967 aa17.52■□□□□ 0.4
TMEM54-206ENST00000482771 KLRG1Q96E93 195 aa17.51■□□□□ 0.39
TMEM54-206ENST00000482771 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
TMEM54-206ENST00000482771 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
TMEM54-206ENST00000482771 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
TMEM54-206ENST00000482771 SLC39A6Q13433 755 aa17.49■□□□□ 0.39
TMEM54-206ENST00000482771 SLC52A2Q9HAB3 445 aa17.49■□□□□ 0.39
TMEM54-206ENST00000482771 KNSTRNQ9Y448 316 aa17.49■□□□□ 0.39
TMEM54-206ENST00000482771 KCPQ6ZWJ8 1503 aa17.48■□□□□ 0.39
TMEM54-206ENST00000482771 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
TMEM54-206ENST00000482771 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
TMEM54-206ENST00000482771 NFIXQ14938 502 aa17.48■□□□□ 0.39
TMEM54-206ENST00000482771 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
TMEM54-206ENST00000482771 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
TMEM54-206ENST00000482771 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
TMEM54-206ENST00000482771 RASSF7Q02833 373 aa17.46■□□□□ 0.39
TMEM54-206ENST00000482771 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms