RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ARID5BQ14865 1188 aa10.71□□□□□ -0.69
SNX13-208ENST00000482558 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
SNX13-208ENST00000482558 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
SNX13-208ENST00000482558 PLEKHH2Q8IVE3 1493 aa10.7□□□□□ -0.7
SNX13-208ENST00000482558 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
SNX13-208ENST00000482558 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
SNX13-208ENST00000482558 GRM5P41594 1212 aa10.7□□□□□ -0.7
SNX13-208ENST00000482558 RSBN1LQ6PCB5 846 aaPredicted RBP10.7□□□□□ -0.7
SNX13-208ENST00000482558 BPHLQ86WA6 291 aaPredicted RBP10.7□□□□□ -0.7
SNX13-208ENST00000482558 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
SNX13-208ENST00000482558 ANKRD30BQ9BXX2 1392 aa10.69□□□□□ -0.7
SNX13-208ENST00000482558 BMP2P12643 396 aa10.69□□□□□ -0.7
SNX13-208ENST00000482558 LINC00528Q8N1L1 170 aa10.69□□□□□ -0.7
SNX13-208ENST00000482558 CDC42BPAQ5VT25 1732 aa10.69□□□□□ -0.7
SNX13-208ENST00000482558 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
SNX13-208ENST00000482558 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
SNX13-208ENST00000482558 SOS2Q07890 1332 aaPredicted RBP10.68□□□□□ -0.7
SNX13-208ENST00000482558 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
SNX13-208ENST00000482558 PROCA1Q8NCQ7 364 aaPredicted RBP10.68□□□□□ -0.7
SNX13-208ENST00000482558 MAP10Q9P2G4 905 aa10.68□□□□□ -0.7
SNX13-208ENST00000482558 ABCC2Q92887 1545 aa10.68□□□□□ -0.7
SNX13-208ENST00000482558 CCER2I3L3R5 266 aa10.67□□□□□ -0.7
SNX13-208ENST00000482558 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
SNX13-208ENST00000482558 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
SNX13-208ENST00000482558 FOXD4L4Q8WXT5 416 aaPredicted RBP10.67□□□□□ -0.7
SNX13-208ENST00000482558 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
SNX13-208ENST00000482558 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
SNX13-208ENST00000482558 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
SNX13-208ENST00000482558 ZNF644Q9H582 1327 aaPredicted RBP10.66□□□□□ -0.7
SNX13-208ENST00000482558 E9PSI1 815 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 RNF225M0QZC1 329 aaPredicted RBP10.66□□□□□ -0.7
SNX13-208ENST00000482558 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 TMEM151AQ8N4L1 468 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNX13-208ENST00000482558 SERPINA10Q9UK55 444 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 DENND4BO75064 1496 aaPredicted RBP10.66□□□□□ -0.7
SNX13-208ENST00000482558 C9orf84Q5VXU9 1444 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 KIAA1107Q9UPP5 1409 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 KDM6BO15054 1643 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
SNX13-208ENST00000482558 KDM5DQ9BY66 1539 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 KDM5BQ9UGL1 1544 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 AGERQ15109 404 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 CCDC97Q96F63 343 aaPredicted RBP10.65□□□□□ -0.7
SNX13-208ENST00000482558 TSEN34Q9BSV6 310 aaKnown RBP10.65□□□□□ -0.7
SNX13-208ENST00000482558 C1QTNF2Q9BXJ5 285 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 LIMD1Q9UGP4 676 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 DNMT3LQ9UJW3 386 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 MAP4K5Q9Y4K4 846 aa10.65□□□□□ -0.7
SNX13-208ENST00000482558 CLASP1Q7Z460 1538 aa10.64□□□□□ -0.71
SNX13-208ENST00000482558 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
SNX13-208ENST00000482558 ANP32CO43423 234 aa10.64□□□□□ -0.71
SNX13-208ENST00000482558 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNX13-208ENST00000482558 ARMC2Q8NEN0 867 aa10.64□□□□□ -0.71
SNX13-208ENST00000482558 ZNF777Q9ULD5 760 aaPredicted RBP10.64□□□□□ -0.71
SNX13-208ENST00000482558 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
SNX13-208ENST00000482558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.63□□□□□ -0.71
SNX13-208ENST00000482558 MAST1Q9Y2H9 1570 aa10.63□□□□□ -0.71
SNX13-208ENST00000482558 PZPP20742 1482 aa10.62□□□□□ -0.71
SNX13-208ENST00000482558 GDF11O95390 407 aa10.62□□□□□ -0.71
SNX13-208ENST00000482558 RASSF7Q02833 373 aa10.62□□□□□ -0.71
SNX13-208ENST00000482558 CSPP1Q1MSJ5 1256 aa10.62□□□□□ -0.71
SNX13-208ENST00000482558 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
SNX13-208ENST00000482558 ZNF428Q96B54 188 aa10.62□□□□□ -0.71
SNX13-208ENST00000482558 YTHDC1Q96MU7 727 aaKnown RBP10.62□□□□□ -0.71
SNX13-208ENST00000482558 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
SNX13-208ENST00000482558 KRT76Q01546 638 aa10.61□□□□□ -0.71
SNX13-208ENST00000482558 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
SNX13-208ENST00000482558 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
SNX13-208ENST00000482558 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
SNX13-208ENST00000482558 ARAP3Q8WWN8 1544 aa10.61□□□□□ -0.71
SNX13-208ENST00000482558 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
SNX13-208ENST00000482558 NANOS1Q8WY41 292 aaKnown RBP10.6□□□□□ -0.71
SNX13-208ENST00000482558 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
SNX13-208ENST00000482558 ADAMTS8Q9UP79 889 aa10.6□□□□□ -0.71
SNX13-208ENST00000482558 KIF15Q9NS87 1388 aa10.6□□□□□ -0.71
SNX13-208ENST00000482558 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
SNX13-208ENST00000482558 MYO5CQ9NQX4 1742 aa10.59□□□□□ -0.71
SNX13-208ENST00000482558 FSHRP23945 695 aa10.59□□□□□ -0.71
SNX13-208ENST00000482558 MCM6Q14566 821 aa10.59□□□□□ -0.71
SNX13-208ENST00000482558 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
SNX13-208ENST00000482558 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.71
SNX13-208ENST00000482558 ARHGEF12Q9NZN5 1544 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 CDC42BPBQ9Y5S2 1711 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 SAMD9LQ8IVG5 1584 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 NUP155O75694 1391 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 TTLL8A6PVC2 850 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 RFC5P40937 340 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
SNX13-208ENST00000482558 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
SNX13-208ENST00000482558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNX13-208ENST00000482558 PLXNC1O60486 1568 aa10.57□□□□□ -0.72
SNX13-208ENST00000482558 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
SNX13-208ENST00000482558 PTSQ03393 145 aa10.57□□□□□ -0.72
SNX13-208ENST00000482558 EFCAB2Q5VUJ9 269 aa10.57□□□□□ -0.72
SNX13-208ENST00000482558 RETREG2Q8NC44 543 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms