RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 FCHSD2O94868 740 aa21.01■□□□□ 0.95
HDAC6-224ENST00000481929 ATP6V1AP38606 617 aa21.01■□□□□ 0.95
HDAC6-224ENST00000481929 ITPK1Q13572 414 aa21.01■□□□□ 0.95
HDAC6-224ENST00000481929 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-224ENST00000481929 TNS4Q8IZW8 715 aa21.01■□□□□ 0.95
HDAC6-224ENST00000481929 TMOD3Q9NYL9 352 aa21.01■□□□□ 0.95
HDAC6-224ENST00000481929 KIF24Q5T7B8 1368 aa21■□□□□ 0.95
HDAC6-224ENST00000481929 TMF1P82094 1093 aa20.99■□□□□ 0.95
HDAC6-224ENST00000481929 C9orf131Q5VYM1 1079 aa20.99■□□□□ 0.95
HDAC6-224ENST00000481929 NLGN1Q8N2Q7 840 aa20.99■□□□□ 0.95
HDAC6-224ENST00000481929 TESK2Q96S53 571 aa20.99■□□□□ 0.95
HDAC6-224ENST00000481929 CCDC87Q9NVE4 849 aa20.99■□□□□ 0.95
HDAC6-224ENST00000481929 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
HDAC6-224ENST00000481929 DPEP1P16444 411 aa20.98■□□□□ 0.95
HDAC6-224ENST00000481929 ASAP1Q9ULH1 1129 aa20.98■□□□□ 0.95
HDAC6-224ENST00000481929 SLC24A1O60721 1099 aa20.97■□□□□ 0.95
HDAC6-224ENST00000481929 PRELPP51888 382 aa20.97■□□□□ 0.95
HDAC6-224ENST00000481929 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
HDAC6-224ENST00000481929 RTCBQ9Y3I0 505 aaKnown RBP20.97■□□□□ 0.95
HDAC6-224ENST00000481929 KDM2BQ8NHM5 1336 aa20.97■□□□□ 0.95
HDAC6-224ENST00000481929 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
HDAC6-224ENST00000481929 PARP3Q9Y6F1 533 aa20.95■□□□□ 0.94
HDAC6-224ENST00000481929 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
HDAC6-224ENST00000481929 C4AP0C0L4 1744 aa20.94■□□□□ 0.94
HDAC6-224ENST00000481929 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
HDAC6-224ENST00000481929 NCAPD2Q15021 1401 aa20.94■□□□□ 0.94
HDAC6-224ENST00000481929 ARFGEF1Q9Y6D6 1849 aa20.92■□□□□ 0.94
HDAC6-224ENST00000481929 ADRA2BP18089 450 aa20.92■□□□□ 0.94
HDAC6-224ENST00000481929 ATG3Q9NT62 314 aa20.92■□□□□ 0.94
HDAC6-224ENST00000481929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.92■□□□□ 0.941e-11■■□□□ 11.5
HDAC6-224ENST00000481929 RNF181Q9P0P0 153 aa20.92■□□□□ 0.94
HDAC6-224ENST00000481929 KIF20BQ96Q89 1820 aa20.92■□□□□ 0.94
HDAC6-224ENST00000481929 GYS1P13807 737 aa20.91■□□□□ 0.94
HDAC6-224ENST00000481929 KDRP35968 1356 aa20.91■□□□□ 0.94
HDAC6-224ENST00000481929 ARHGEF1Q92888 912 aaKnown RBP20.91■□□□□ 0.94
HDAC6-224ENST00000481929 RRAGCQ9HB90 399 aa20.91■□□□□ 0.94
HDAC6-224ENST00000481929 PIM2Q9P1W9 311 aa20.91■□□□□ 0.94
HDAC6-224ENST00000481929 EMILIN1Q9Y6C2 1016 aa20.91■□□□□ 0.94
HDAC6-224ENST00000481929 RFC4P35249 363 aa20.9■□□□□ 0.94
HDAC6-224ENST00000481929 IFNL2Q8IZJ0 200 aa20.9■□□□□ 0.94
HDAC6-224ENST00000481929 SMC1BQ8NDV3 1235 aa20.9■□□□□ 0.94
HDAC6-224ENST00000481929 TNRC6CQ9HCJ0 1690 aaKnown RBP20.89■□□□□ 0.94
HDAC6-224ENST00000481929 TONSLQ96HA7 1378 aa20.89■□□□□ 0.93
HDAC6-224ENST00000481929 PHKG2P15735 406 aa20.89■□□□□ 0.93
HDAC6-224ENST00000481929 KCNA3P22001 575 aa20.89■□□□□ 0.93
HDAC6-224ENST00000481929 DALRD3Q5D0E6 543 aaKnown RBP20.89■□□□□ 0.93
HDAC6-224ENST00000481929 DCAF5Q96JK2 942 aa20.89■□□□□ 0.93
HDAC6-224ENST00000481929 RC3H1Q5TC82 1133 aaKnown RBP20.88■□□□□ 0.93
HDAC6-224ENST00000481929 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
HDAC6-224ENST00000481929 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
HDAC6-224ENST00000481929 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-224ENST00000481929 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
HDAC6-224ENST00000481929 ZNF831Q5JPB2 1677 aa20.86■□□□□ 0.93
HDAC6-224ENST00000481929 PCNTO95613 3336 aa20.85■□□□□ 0.93
HDAC6-224ENST00000481929 HSPA1AP0DMV8 641 aaKnown RBP20.85■□□□□ 0.93
HDAC6-224ENST00000481929 HSPA1BP0DMV9 641 aaKnown RBP20.85■□□□□ 0.93
HDAC6-224ENST00000481929 SLC4A9Q96Q91 983 aa20.85■□□□□ 0.93
HDAC6-224ENST00000481929 EYA1Q99502 592 aa20.85■□□□□ 0.93
HDAC6-224ENST00000481929 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
HDAC6-224ENST00000481929 WASHC2AQ641Q2 1341 aa20.82■□□□□ 0.92
HDAC6-224ENST00000481929 ANKRD26Q9UPS8 1709 aa20.81■□□□□ 0.92
HDAC6-224ENST00000481929 ZC3H4Q9UPT8 1303 aaKnown RBP20.81■□□□□ 0.92
HDAC6-224ENST00000481929 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
HDAC6-224ENST00000481929 CHRNA5P30532 468 aa20.8■□□□□ 0.92
HDAC6-224ENST00000481929 SBF1O95248 1867 aa20.79■□□□□ 0.92
HDAC6-224ENST00000481929 DDR1Q08345 913 aa20.79■□□□□ 0.92
HDAC6-224ENST00000481929 MYH14Q7Z406 1995 aaKnown RBP20.78■□□□□ 0.92
HDAC6-224ENST00000481929 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
HDAC6-224ENST00000481929 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-224ENST00000481929 FKBP8Q14318 412 aa20.78■□□□□ 0.92
HDAC6-224ENST00000481929 CDCA8Q53HL2 280 aa20.78■□□□□ 0.92
HDAC6-224ENST00000481929 SRP68Q9UHB9 627 aaKnown RBP20.78■□□□□ 0.92
HDAC6-224ENST00000481929 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
HDAC6-224ENST00000481929 RASSF7Q02833 373 aa20.77■□□□□ 0.92
HDAC6-224ENST00000481929 CRKLP46109 303 aaKnown RBP20.76■□□□□ 0.91
HDAC6-224ENST00000481929 CARD14Q9BXL6 1004 aa20.76■□□□□ 0.91
HDAC6-224ENST00000481929 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
HDAC6-224ENST00000481929 CABP4P57796 275 aa20.75■□□□□ 0.91
HDAC6-224ENST00000481929 KDM6AO15550 1401 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-224ENST00000481929 PTCD1O75127 700 aaKnown RBP20.74■□□□□ 0.91
HDAC6-224ENST00000481929 LMNB1P20700 586 aa20.74■□□□□ 0.91
HDAC6-224ENST00000481929 POLRMTO00411 1230 aaKnown RBP20.73■□□□□ 0.91
HDAC6-224ENST00000481929 EIF4A2Q14240 407 aaKnown RBP20.73■□□□□ 0.91
HDAC6-224ENST00000481929 POLKQ9UBT6 870 aa20.72■□□□□ 0.91
HDAC6-224ENST00000481929 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-224ENST00000481929 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-224ENST00000481929 TM4SF1P30408 202 aa20.7■□□□□ 0.9
HDAC6-224ENST00000481929 ZPR1O75312 459 aa20.69■□□□□ 0.9
HDAC6-224ENST00000481929 TIAM2Q8IVF5 1701 aa20.68■□□□□ 0.9
HDAC6-224ENST00000481929 MTHFSP49914 203 aa20.67■□□□□ 0.9
HDAC6-224ENST00000481929 AMOTQ4VCS5 1084 aa20.67■□□□□ 0.9
HDAC6-224ENST00000481929 USPL1Q5W0Q7 1092 aa20.67■□□□□ 0.9
HDAC6-224ENST00000481929 TJP1Q07157 1748 aa20.67■□□□□ 0.9
HDAC6-224ENST00000481929 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
HDAC6-224ENST00000481929 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
HDAC6-224ENST00000481929 DPY19L2Q6NUT2 758 aa20.65■□□□□ 0.9
HDAC6-224ENST00000481929 INTS5Q6P9B9 1019 aaKnown RBP20.65■□□□□ 0.9
HDAC6-224ENST00000481929 NFATC2IPQ8NCF5 419 aa20.65■□□□□ 0.9
HDAC6-224ENST00000481929 CREBZFQ9NS37 354 aa20.65■□□□□ 0.9
HDAC6-224ENST00000481929 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms