RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 RNF123Q5XPI4 1314 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 NEFMP07197 916 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 AMPHP49418 695 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 PIP4K2BP78356 416 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 AKAP4Q5JQC9 854 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 FLAD1Q8NFF5 587 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 TEX13AQ9BXU3 409 aaPredicted RBP3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 PRKRIP1Q9H875 184 aaPredicted RBP3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 PDZRN3Q9UPQ7 1066 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 CLEC11AQ9Y240 323 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 KCPQ6ZWJ8 1503 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 UBR3Q6ZT12 1888 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 FAM83GA6ND36 823 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 DCAF5Q96JK2 942 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 CREBZFQ9NS37 354 aa3.62□□□□□ -1.83
RAB3IP-206ENST00000481897 C4BP0C0L5 1744 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 ATP10DQ9P241 1426 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 ANP32CO43423 234 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 EVX2Q03828 476 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 PDE3BQ13370 1112 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 BCL11BQ9C0K0 894 aaPredicted RBP3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 RC3H1Q5TC82 1133 aaKnown RBP3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 ASTLQ6HA08 431 aaPredicted RBP3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 IFNL2Q8IZJ0 200 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 RAPGEF4Q8WZA2 1011 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 HEG1Q9ULI3 1381 aa3.61□□□□□ -1.83
RAB3IP-206ENST00000481897 C4AP0C0L4 1744 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 TUBGCP6Q96RT7 1819 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 SNPHO15079 494 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 ZBTB22O15209 634 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 TIE1P35590 1138 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 SAFB2Q14151 953 aaKnown RBP eCLIP3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 EIF4A2Q14240 407 aaKnown RBP3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 QTRT2Q9H974 415 aaKnown RBP3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 BTG4Q9NY30 223 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 CNTNAP4Q9C0A0 1308 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 EVA1CP58658 441 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 KRT27Q7Z3Y8 459 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 WDR63Q8IWG1 891 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 RUNDC1Q96C34 613 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 EXOC5O00471 708 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 DDB1Q16531 1140 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 ZCRB1Q8TBF4 217 aaKnown RBP3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 SLC16A10Q8TF71 515 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 RSPH6AQ9H0K4 717 aa3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 DDX60Q8IY21 1712 aaKnown RBP3.6□□□□□ -1.83
RAB3IP-206ENST00000481897 NFE2L2Q16236 605 aa3.59□□□□□ -1.83
RAB3IP-206ENST00000481897 SCUBE2Q9NQ36 999 aa3.59□□□□□ -1.83
RAB3IP-206ENST00000481897 KDM6AO15550 1401 aaPredicted RBP3.59□□□□□ -1.83
RAB3IP-206ENST00000481897 COL15A1P39059 1388 aa3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 A0A087WZG4 1122 aa3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 BRPF1P55201 1214 aaPredicted RBP3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 TOM1L2Q6ZVM7 507 aa3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 GGNBP2Q9H3C7 697 aa3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 RGS17Q9UGC6 210 aaPredicted RBP3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 ZRANB1Q9UGI0 708 aa3.59□□□□□ -1.84
RAB3IP-206ENST00000481897 LRRC37AA6NMS7 1700 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 IGSF3O75054 1194 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 PHKG2P15735 406 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 BAG6P46379 1132 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 C8orf37Q96NL8 207 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 PLEKHF1Q96S99 279 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 MTHFSP49914 203 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 AAMPQ13685 434 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 WDR43Q15061 677 aaKnown RBP eCLIP3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 C1orf141Q5JVX7 400 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 EYA1Q99502 592 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 IFT57Q9NWB7 429 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 MAPK8IP3Q9UPT6 1336 aa3.58□□□□□ -1.84
RAB3IP-206ENST00000481897 ARFGEF1Q9Y6D6 1849 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 GNAT3A8MTJ3 354 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 HSP90B1P14625 803 aaKnown RBP3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 GRIPAP1Q4V328 841 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 SEPT12Q8IYM1 358 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 KAT6BQ8WYB5 2073 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 KIAA1551Q9HCM1 1747 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 CSB-PGBD3P0DP91 1061 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 GNAI1P63096 354 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 SF3B2Q13435 895 aaKnown RBP3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 LARP1Q6PKG0 1096 aaKnown RBP3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 EMILIN1Q9Y6C2 1016 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 ZNF521Q96K83 1311 aa3.57□□□□□ -1.84
RAB3IP-206ENST00000481897 ZNF853P0CG23 659 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 SSFA2P28290 1259 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 NBPF6Q5VWK0 638 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 OTUD5Q96G74 571 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 AK7Q96M32 723 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 NBPF4Q96M43 638 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 SLC52A2Q9HAB3 445 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 AXIN2Q9Y2T1 843 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 RNMTO43148 476 aaKnown RBP3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 POTEAQ6S8J7 498 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 MYH16Q9H6N6 1097 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 NLRP2Q9NX02 1062 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 HDAC5Q9UQL6 1122 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 BRCA1P38398 1863 aaKnown RBP3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 ZNF609O15014 1411 aa3.56□□□□□ -1.84
RAB3IP-206ENST00000481897 ZC3H6P61129 1189 aaKnown RBP3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 HSP90AB2PQ58FF8 381 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms