RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 F11P03951 625 aa6.36□□□□□ -1.39
KDM1A-204ENST00000481879 NSFL1CQ9UNZ2 370 aaKnown RBP6.36□□□□□ -1.39
KDM1A-204ENST00000481879 NDUFB9Q9Y6M9 179 aa6.36□□□□□ -1.39
KDM1A-204ENST00000481879 SOCS7O14512 581 aa6.35□□□□□ -1.39
KDM1A-204ENST00000481879 GNRH1P01148 92 aa6.35□□□□□ -1.39
KDM1A-204ENST00000481879 MX2P20592 715 aa6.35□□□□□ -1.39
KDM1A-204ENST00000481879 PODNQ7Z5L7 613 aa6.35□□□□□ -1.39
KDM1A-204ENST00000481879 ACDQ96AP0 544 aa6.35□□□□□ -1.39
KDM1A-204ENST00000481879 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
KDM1A-204ENST00000481879 NUCKS1Q9H1E3 243 aaKnown RBP6.35□□□□□ -1.39
KDM1A-204ENST00000481879 CENPCQ03188 943 aa6.34□□□□□ -1.39
KDM1A-204ENST00000481879 MTMR14Q8NCE2 650 aa6.34□□□□□ -1.39
KDM1A-204ENST00000481879 CNKSR1Q969H4 720 aa6.34□□□□□ -1.39
KDM1A-204ENST00000481879 ESYT1Q9BSJ8 1104 aa6.34□□□□□ -1.39
KDM1A-204ENST00000481879 RAB6BQ9NRW1 208 aa6.34□□□□□ -1.39
KDM1A-204ENST00000481879 LRRC4BQ9NT99 713 aa6.34□□□□□ -1.39
KDM1A-204ENST00000481879 APBB1O00213 710 aa6.33□□□□□ -1.4
KDM1A-204ENST00000481879 GPR37L1O60883 481 aa6.33□□□□□ -1.4
KDM1A-204ENST00000481879 MYCP01106 439 aaPredicted RBP6.33□□□□□ -1.4
KDM1A-204ENST00000481879 CFHR5Q9BXR6 569 aa6.33□□□□□ -1.4
KDM1A-204ENST00000481879 CEP126Q9P2H0 1117 aa6.33□□□□□ -1.4
KDM1A-204ENST00000481879 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 IL2RAP01589 272 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 ITGB7P26010 798 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 PHKA2P46019 1235 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 MAP2K3P46734 347 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 XAGE2Q96GT9 111 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 ZSCAN10Q96SZ4 725 aaPredicted RBP6.32□□□□□ -1.4
KDM1A-204ENST00000481879 CDCA7Q9BWT1 371 aaPredicted RBP6.32□□□□□ -1.4
KDM1A-204ENST00000481879 SNRKQ9NRH2 765 aa6.32□□□□□ -1.4
KDM1A-204ENST00000481879 OIP5O43482 229 aa6.31□□□□□ -1.4
KDM1A-204ENST00000481879 GTF2E1P29083 439 aaPredicted RBP6.31□□□□□ -1.4
KDM1A-204ENST00000481879 BRPF1P55201 1214 aaPredicted RBP6.31□□□□□ -1.4
KDM1A-204ENST00000481879 CCDC85AQ96PX6 553 aaPredicted RBP6.31□□□□□ -1.4
KDM1A-204ENST00000481879 GPAMQ9HCL2 828 aa6.31□□□□□ -1.4
KDM1A-204ENST00000481879 HRH3Q9Y5N1 445 aa6.31□□□□□ -1.4
KDM1A-204ENST00000481879 A0A1B0GTH6 734 aa6.3□□□□□ -1.4
KDM1A-204ENST00000481879 THBS1P07996 1170 aa6.3□□□□□ -1.4
KDM1A-204ENST00000481879 GNASQ5JWF2 1037 aa6.3□□□□□ -1.4
KDM1A-204ENST00000481879 TMEM214Q6NUQ4 689 aaKnown RBP6.3□□□□□ -1.4
KDM1A-204ENST00000481879 OXCT2Q9BYC2 517 aaPredicted RBP6.3□□□□□ -1.4
KDM1A-204ENST00000481879 PHF24Q9UPV7 400 aa6.3□□□□□ -1.4
KDM1A-204ENST00000481879 CSB-PGBD3P0DP91 1061 aa6.29□□□□□ -1.4
KDM1A-204ENST00000481879 ESCO1Q5FWF5 840 aa6.29□□□□□ -1.4
KDM1A-204ENST00000481879 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
KDM1A-204ENST00000481879 KLRG1Q96E93 195 aa6.29□□□□□ -1.4
KDM1A-204ENST00000481879 FHDC1Q9C0D6 1143 aaPredicted RBP6.29□□□□□ -1.4
KDM1A-204ENST00000481879 GOLGA2P5Q9HBQ8 144 aa6.29□□□□□ -1.4
KDM1A-204ENST00000481879 USP4Q13107 963 aa6.28□□□□□ -1.4
KDM1A-204ENST00000481879 LBRQ14739 615 aaKnown RBP6.28□□□□□ -1.4
KDM1A-204ENST00000481879 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
KDM1A-204ENST00000481879 C4orf17Q53FE4 359 aa6.28□□□□□ -1.4
KDM1A-204ENST00000481879 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
KDM1A-204ENST00000481879 MSX1P28360 303 aa6.27□□□□□ -1.41
KDM1A-204ENST00000481879 EIF4G2P78344 907 aaKnown RBP eCLIP6.27□□□□□ -1.41
KDM1A-204ENST00000481879 PHTF2Q8N3S3 785 aa6.27□□□□□ -1.41
KDM1A-204ENST00000481879 RUBCNLQ9H714 662 aa6.27□□□□□ -1.41
KDM1A-204ENST00000481879 PRM3Q9NNZ6 103 aa6.27□□□□□ -1.41
KDM1A-204ENST00000481879 DOLKQ9UPQ8 538 aa6.27□□□□□ -1.41
KDM1A-204ENST00000481879 SHISA8B8ZZ34 492 aa6.26□□□□□ -1.41
KDM1A-204ENST00000481879 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
KDM1A-204ENST00000481879 UBAP2LQ14157 1087 aaKnown RBP6.26□□□□□ -1.41
KDM1A-204ENST00000481879 SLFNL1Q499Z3 407 aa6.26□□□□□ -1.41
KDM1A-204ENST00000481879 EFHC2Q5JST6 749 aa6.26□□□□□ -1.41
KDM1A-204ENST00000481879 GDF2Q9UK05 429 aaPredicted RBP6.26□□□□□ -1.41
KDM1A-204ENST00000481879 MKL2Q9ULH7 1088 aa6.26□□□□□ -1.41
KDM1A-204ENST00000481879 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 C1orf229Q6ZS94 237 aaPredicted RBP6.25□□□□□ -1.41
KDM1A-204ENST00000481879 PPARGC1BQ86YN6 1023 aaKnown RBP6.25□□□□□ -1.41
KDM1A-204ENST00000481879 RHBDD1Q8TEB9 315 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 EDARADDQ8WWZ3 215 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 SIRT1Q96EB6 747 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 RRAGCQ9HB90 399 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 ETNK1Q9HBU6 452 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 ATXN7L1Q9ULK2 861 aaPredicted RBP6.25□□□□□ -1.41
KDM1A-204ENST00000481879 TBC1D2BQ9UPU7 963 aa6.25□□□□□ -1.41
KDM1A-204ENST00000481879 BMP4P12644 408 aa6.24□□□□□ -1.41
KDM1A-204ENST00000481879 RNF135Q8IUD6 432 aa6.24□□□□□ -1.41
KDM1A-204ENST00000481879 GOLGA6L1Q8N7Z2 621 aa6.24□□□□□ -1.41
KDM1A-204ENST00000481879 C2CD2LO14523 706 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 BNIP3LO60238 219 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
KDM1A-204ENST00000481879 FGFR3P22607 806 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 TLR1Q15399 786 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 ALYREFQ86V81 257 aaKnown RBP6.23□□□□□ -1.41
KDM1A-204ENST00000481879 ABHD17AQ96GS6 310 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 CRISPLD1Q9H336 500 aa6.23□□□□□ -1.41
KDM1A-204ENST00000481879 CTBSQ01459 385 aa6.22□□□□□ -1.41
KDM1A-204ENST00000481879 IRF5Q13568 498 aa6.22□□□□□ -1.41
KDM1A-204ENST00000481879 TBC1D9Q6ZT07 1266 aa6.22□□□□□ -1.41
KDM1A-204ENST00000481879 SEMA6BQ9H3T3 888 aa6.22□□□□□ -1.41
KDM1A-204ENST00000481879 NDFIP2Q9NV92 336 aa6.22□□□□□ -1.41
KDM1A-204ENST00000481879 CHIC2Q9UKJ5 165 aa6.22□□□□□ -1.41
KDM1A-204ENST00000481879 SLC24A1O60721 1099 aa6.21□□□□□ -1.42
KDM1A-204ENST00000481879 AMPD1P23109 780 aa6.21□□□□□ -1.42
KDM1A-204ENST00000481879 COL8A1P27658 744 aa6.21□□□□□ -1.42
KDM1A-204ENST00000481879 PLA2G4AP47712 749 aa6.21□□□□□ -1.42
KDM1A-204ENST00000481879 FIGNL1Q6PIW4 674 aa6.21□□□□□ -1.42
KDM1A-204ENST00000481879 GGA1Q9UJY5 639 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms