RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 SLC24A1O60721 1099 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 ATXN8OSP0DMR3 200 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 SIK1P57059 783 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 TMF1P82094 1093 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 ITPK1Q13572 414 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 TMOD3Q9NYL9 352 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 KDRP35968 1356 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 C4AP0C0L4 1744 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 COL5A3P25940 1745 aaPredicted RBP7.69□□□□□ -1.18
TFE3-202ENST00000481606 WDR90Q96KV7 1748 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 C10orf71Q711Q0 1435 aa7.69□□□□□ -1.18
TFE3-202ENST00000481606 BRCA1P38398 1863 aaKnown RBP7.68□□□□□ -1.18
TFE3-202ENST00000481606 PPM1GO15355 546 aaPredicted RBP7.68□□□□□ -1.18
TFE3-202ENST00000481606 MMP10P09238 476 aa7.68□□□□□ -1.18
TFE3-202ENST00000481606 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
TFE3-202ENST00000481606 SPG7Q9UQ90 795 aa7.68□□□□□ -1.18
TFE3-202ENST00000481606 APLP1P51693 650 aa7.67□□□□□ -1.18
TFE3-202ENST00000481606 NKX1-1Q15270 411 aaPredicted RBP7.67□□□□□ -1.18
TFE3-202ENST00000481606 ASAP1Q9ULH1 1129 aa7.67□□□□□ -1.18
TFE3-202ENST00000481606 BCS1LQ9Y276 419 aa7.67□□□□□ -1.18
TFE3-202ENST00000481606 ZNF831Q5JPB2 1677 aa7.67□□□□□ -1.18
TFE3-202ENST00000481606 ARFGEF1Q9Y6D6 1849 aa7.66□□□□□ -1.18
TFE3-202ENST00000481606 TOMM70O94826 608 aa7.66□□□□□ -1.18
TFE3-202ENST00000481606 PHKG2P15735 406 aa7.66□□□□□ -1.18
TFE3-202ENST00000481606 NMRK2Q9NPI5 230 aa7.66□□□□□ -1.18
TFE3-202ENST00000481606 A0A0G2JLW4 131 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 TGFB2P61812 414 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 CDCA8Q53HL2 280 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 WASHC2AQ641Q2 1341 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 ARHGAP27Q6ZUM4 889 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 IFNL2Q8IZJ0 200 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 EYA1Q99502 592 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 CARD14Q9BXL6 1004 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 PLEKHG2Q9H7P9 1386 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 ATG3Q9NT62 314 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 CCDC87Q9NVE4 849 aa7.65□□□□□ -1.18
TFE3-202ENST00000481606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.65□□□□□ -1.18
TFE3-202ENST00000481606 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
TFE3-202ENST00000481606 TNRC6CQ9HCJ0 1690 aaKnown RBP7.64□□□□□ -1.19
TFE3-202ENST00000481606 KCPQ6ZWJ8 1503 aa7.64□□□□□ -1.19
TFE3-202ENST00000481606 FCHSD2O94868 740 aa7.64□□□□□ -1.19
TFE3-202ENST00000481606 DPEP1P16444 411 aa7.64□□□□□ -1.19
TFE3-202ENST00000481606 TRAPPC3LQ5T215 181 aa7.64□□□□□ -1.19
TFE3-202ENST00000481606 NLGN1Q8N2Q7 840 aa7.64□□□□□ -1.19
TFE3-202ENST00000481606 RBM42Q9BTD8 480 aaKnown RBP7.64□□□□□ -1.19
TFE3-202ENST00000481606 GOLGB1Q14789 3259 aaKnown RBP7.64□□□□□ -1.19
TFE3-202ENST00000481606 MYH14Q7Z406 1995 aaKnown RBP7.64□□□□□ -1.19
TFE3-202ENST00000481606 TJP1Q07157 1748 aa7.64□□□□□ -1.19
TFE3-202ENST00000481606 KDM6AO15550 1401 aaPredicted RBP7.63□□□□□ -1.19
TFE3-202ENST00000481606 CNTNAP4Q9C0A0 1308 aa7.63□□□□□ -1.19
TFE3-202ENST00000481606 C9orf131Q5VYM1 1079 aa7.63□□□□□ -1.19
TFE3-202ENST00000481606 C16orf71Q8IYS4 520 aaPredicted RBP7.63□□□□□ -1.19
TFE3-202ENST00000481606 SLC4A9Q96Q91 983 aa7.63□□□□□ -1.19
TFE3-202ENST00000481606 PARP3Q9Y6F1 533 aa7.63□□□□□ -1.19
TFE3-202ENST00000481606 GYS1P13807 737 aa7.62□□□□□ -1.19
TFE3-202ENST00000481606 RFC4P35249 363 aa7.62□□□□□ -1.19
TFE3-202ENST00000481606 HTRA3P83110 453 aa7.62□□□□□ -1.19
TFE3-202ENST00000481606 EIF4A2Q14240 407 aaKnown RBP7.62□□□□□ -1.19
TFE3-202ENST00000481606 AMER1Q5JTC6 1135 aaPredicted RBP7.62□□□□□ -1.19
TFE3-202ENST00000481606 DNAJC5GQ8N7S2 189 aa7.62□□□□□ -1.19
TFE3-202ENST00000481606 RBM46Q8TBY0 533 aaKnown RBP7.62□□□□□ -1.19
TFE3-202ENST00000481606 ARHGEF1Q92888 912 aaKnown RBP7.62□□□□□ -1.19
TFE3-202ENST00000481606 POLKQ9UBT6 870 aa7.62□□□□□ -1.19
TFE3-202ENST00000481606 RPS6KA4O75676 772 aa7.61□□□□□ -1.19
TFE3-202ENST00000481606 HSP90AB1P08238 724 aaKnown RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 TNNT2P45379 298 aaPredicted RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 CABP4P57796 275 aa7.61□□□□□ -1.19
TFE3-202ENST00000481606 RC3H1Q5TC82 1133 aaKnown RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 ZNF530Q6P9A1 599 aaPredicted RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 SAMD1Q6SPF0 538 aaPredicted RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 KLRG1Q96E93 195 aa7.61□□□□□ -1.19
TFE3-202ENST00000481606 RNF181Q9P0P0 153 aa7.61□□□□□ -1.19
TFE3-202ENST00000481606 SRP68Q9UHB9 627 aaKnown RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 U3KPZ7 1027 aaPredicted RBP7.61□□□□□ -1.19
TFE3-202ENST00000481606 TIAM2Q8IVF5 1701 aa7.61□□□□□ -1.19
TFE3-202ENST00000481606 ADAMTS7Q9UKP4 1686 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 SBF1O95248 1867 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 KDM2BQ8NHM5 1336 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 USP42Q9H9J4 1324 aaKnown RBP7.6□□□□□ -1.19
TFE3-202ENST00000481606 ERVV-2B6SEH9 535 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 CHRNA5P30532 468 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 CRKLP46109 303 aaKnown RBP7.6□□□□□ -1.19
TFE3-202ENST00000481606 DDR1Q08345 913 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 DALRD3Q5D0E6 543 aaKnown RBP7.6□□□□□ -1.19
TFE3-202ENST00000481606 DCAF5Q96JK2 942 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 POLR3GLQ9BT43 218 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 PIM2Q9P1W9 311 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 SCN11AQ9UI33 1791 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 DLEC1Q9Y238 1755 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 CEP350Q5VT06 3117 aa7.6□□□□□ -1.19
TFE3-202ENST00000481606 PTCD1O75127 700 aaKnown RBP7.59□□□□□ -1.19
TFE3-202ENST00000481606 CAPN15O75808 1086 aa7.59□□□□□ -1.19
TFE3-202ENST00000481606 KCNA3P22001 575 aa7.59□□□□□ -1.19
TFE3-202ENST00000481606 FSTL1Q12841 308 aa7.59□□□□□ -1.19
TFE3-202ENST00000481606 FKBP8Q14318 412 aa7.59□□□□□ -1.19
TFE3-202ENST00000481606 PLEKHO1Q53GL0 409 aaPredicted RBP7.59□□□□□ -1.19
TFE3-202ENST00000481606 AFDNP55196 1824 aaKnown RBP7.59□□□□□ -1.19
TFE3-202ENST00000481606 VIRMAQ69YN4 1812 aaKnown RBP7.58□□□□□ -1.2
TFE3-202ENST00000481606 RASSF7Q02833 373 aa7.58□□□□□ -1.2
TFE3-202ENST00000481606 C1orf141Q5JVX7 400 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 347.9 ms