RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 ALDH1A1P00352 501 aa8.23□□□□□ -1.09
COPA-203ENST00000481040 ECM1Q16610 540 aa8.23□□□□□ -1.09
COPA-203ENST00000481040 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
COPA-203ENST00000481040 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
COPA-203ENST00000481040 ZSCAN29Q8IWY8 852 aaPredicted RBP8.23□□□□□ -1.09
COPA-203ENST00000481040 GTF3C2Q8WUA4 911 aaPredicted RBP8.23□□□□□ -1.09
COPA-203ENST00000481040 DRC1Q96MC2 740 aa8.23□□□□□ -1.09
COPA-203ENST00000481040 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
COPA-203ENST00000481040 RECKO95980 971 aa8.22□□□□□ -1.09
COPA-203ENST00000481040 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
COPA-203ENST00000481040 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
COPA-203ENST00000481040 BAP1Q92560 729 aa8.22□□□□□ -1.09
COPA-203ENST00000481040 SEPT3Q9UH03 358 aa8.22□□□□□ -1.09
COPA-203ENST00000481040 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
COPA-203ENST00000481040 TLL2Q9Y6L7 1015 aa8.22□□□□□ -1.09
COPA-203ENST00000481040 GIGYF1O75420 1035 aaPredicted RBP8.21□□□□□ -1.1
COPA-203ENST00000481040 LGR5O75473 907 aa8.21□□□□□ -1.1
COPA-203ENST00000481040 FKBP4Q02790 459 aaKnown RBP eCLIP8.21□□□□□ -1.1
COPA-203ENST00000481040 PSME1Q06323 249 aa8.21□□□□□ -1.1
COPA-203ENST00000481040 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.1
COPA-203ENST00000481040 COL19A1Q14993 1142 aa8.21□□□□□ -1.1
COPA-203ENST00000481040 FAM177A1Q8N128 213 aaPredicted RBP8.21□□□□□ -1.1
COPA-203ENST00000481040 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
COPA-203ENST00000481040 HINFPQ9BQA5 517 aa8.21□□□□□ -1.1
COPA-203ENST00000481040 PCDHGA11Q9Y5H2 935 aa8.21□□□□□ -1.1
COPA-203ENST00000481040 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
COPA-203ENST00000481040 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
COPA-203ENST00000481040 MKNK1Q9BUB5 465 aa8.2□□□□□ -1.1
COPA-203ENST00000481040 BCL11AQ9H165 835 aa8.2□□□□□ -1.1
COPA-203ENST00000481040 RNF20Q5VTR2 975 aa8.19□□□□□ -1.1
COPA-203ENST00000481040 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
COPA-203ENST00000481040 CARD14Q9BXL6 1004 aa8.19□□□□□ -1.1
COPA-203ENST00000481040 BMP1P13497 986 aa8.18□□□□□ -1.1
COPA-203ENST00000481040 WEE1P30291 646 aa8.18□□□□□ -1.1
COPA-203ENST00000481040 NFX1Q12986 1120 aaKnown RBP8.18□□□□□ -1.1
COPA-203ENST00000481040 MTMR3Q13615 1198 aa8.18□□□□□ -1.1
COPA-203ENST00000481040 EAPPQ56P03 285 aaPredicted RBP8.18□□□□□ -1.1
COPA-203ENST00000481040 TRIM46Q7Z4K8 759 aa8.18□□□□□ -1.1
COPA-203ENST00000481040 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
COPA-203ENST00000481040 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
COPA-203ENST00000481040 MAGEB6P1A0A0J9YX57 407 aa8.17□□□□□ -1.1
COPA-203ENST00000481040 PTCD1O75127 700 aaKnown RBP8.17□□□□□ -1.1
COPA-203ENST00000481040 USP4Q13107 963 aa8.17□□□□□ -1.1
COPA-203ENST00000481040 FKBP5Q13451 457 aaPredicted RBP8.17□□□□□ -1.1
COPA-203ENST00000481040 TSNAXIP1Q2TAA8 658 aa8.17□□□□□ -1.1
COPA-203ENST00000481040 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
COPA-203ENST00000481040 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
COPA-203ENST00000481040 M0R2N6 131 aa8.16□□□□□ -1.1
COPA-203ENST00000481040 CDK11BP21127 795 aaKnown RBP8.16□□□□□ -1.1
COPA-203ENST00000481040 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
COPA-203ENST00000481040 CCDC125Q86Z20 511 aa8.16□□□□□ -1.1
COPA-203ENST00000481040 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
COPA-203ENST00000481040 ERFEQ4G0M1 354 aa8.15□□□□□ -1.1
COPA-203ENST00000481040 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
COPA-203ENST00000481040 TSEN2Q8NCE0 465 aaKnown RBP8.15□□□□□ -1.1
COPA-203ENST00000481040 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
COPA-203ENST00000481040 PURBQ96QR8 312 aaKnown RBP8.15□□□□□ -1.1
COPA-203ENST00000481040 PCDHB11Q9Y5F2 797 aa8.15□□□□□ -1.1
COPA-203ENST00000481040 HELQQ8TDG4 1101 aa8.14□□□□□ -1.11
COPA-203ENST00000481040 COL26A1Q96A83 441 aa8.14□□□□□ -1.11
COPA-203ENST00000481040 WFS1O76024 890 aa8.13□□□□□ -1.11
COPA-203ENST00000481040 NAA30Q147X3 362 aaPredicted RBP8.13□□□□□ -1.11
COPA-203ENST00000481040 BPHLQ86WA6 291 aaPredicted RBP8.13□□□□□ -1.11
COPA-203ENST00000481040 UBXN4Q92575 508 aa8.13□□□□□ -1.11
COPA-203ENST00000481040 SLC10A4Q96EP9 437 aa8.13□□□□□ -1.11
COPA-203ENST00000481040 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
COPA-203ENST00000481040 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
COPA-203ENST00000481040 ESPNB1AK53 854 aa8.12□□□□□ -1.11
COPA-203ENST00000481040 CAPN5O15484 640 aaPredicted RBP8.12□□□□□ -1.11
COPA-203ENST00000481040 FAM13AO94988 1023 aa8.12□□□□□ -1.11
COPA-203ENST00000481040 P4HBP07237 508 aaKnown RBP8.12□□□□□ -1.11
COPA-203ENST00000481040 ERCC5P28715 1186 aaPredicted RBP8.12□□□□□ -1.11
COPA-203ENST00000481040 MRPL58Q14197 206 aaKnown RBP8.12□□□□□ -1.11
COPA-203ENST00000481040 AGERQ15109 404 aa8.12□□□□□ -1.11
COPA-203ENST00000481040 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
COPA-203ENST00000481040 NBPF20Q3BBV1 942 aa8.12□□□□□ -1.11
COPA-203ENST00000481040 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
COPA-203ENST00000481040 RBCK1Q9BYM8 510 aa8.12□□□□□ -1.11
COPA-203ENST00000481040 NPR3P17342 541 aa8.11□□□□□ -1.11
COPA-203ENST00000481040 VARSP26640 1264 aaKnown RBP8.11□□□□□ -1.11
COPA-203ENST00000481040 NNTQ13423 1086 aa8.11□□□□□ -1.11
COPA-203ENST00000481040 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
COPA-203ENST00000481040 GAS2L2Q8NHY3 880 aa8.11□□□□□ -1.11
COPA-203ENST00000481040 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
COPA-203ENST00000481040 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
COPA-203ENST00000481040 SCAMP3O14828 347 aaKnown RBP8.1□□□□□ -1.11
COPA-203ENST00000481040 IGFBP4P22692 258 aa8.1□□□□□ -1.11
COPA-203ENST00000481040 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
COPA-203ENST00000481040 KLF16Q9BXK1 252 aaPredicted RBP8.1□□□□□ -1.11
COPA-203ENST00000481040 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
COPA-203ENST00000481040 TERTO14746 1132 aaKnown RBP8.09□□□□□ -1.11
COPA-203ENST00000481040 FOXO3O43524 673 aa8.09□□□□□ -1.11
COPA-203ENST00000481040 MYCP01106 439 aaPredicted RBP8.09□□□□□ -1.11
COPA-203ENST00000481040 TIMP2P16035 220 aa8.09□□□□□ -1.11
COPA-203ENST00000481040 HDLBPQ00341 1268 aaKnown RBP8.09□□□□□ -1.11
COPA-203ENST00000481040 MPNDQ8N594 471 aa8.09□□□□□ -1.11
COPA-203ENST00000481040 TREHO43280 583 aa8.08□□□□□ -1.12
COPA-203ENST00000481040 NDUFB5O43674 189 aa8.08□□□□□ -1.12
COPA-203ENST00000481040 NR3C2P08235 984 aa8.08□□□□□ -1.12
COPA-203ENST00000481040 CANXP27824 592 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms