RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 ATG3Q9NT62 314 aa18.65■□□□□ 0.58
NDC1-202ENST00000480952 FCHSD2O94868 740 aa18.64■□□□□ 0.57
NDC1-202ENST00000480952 DPEP1P16444 411 aa18.64■□□□□ 0.57
NDC1-202ENST00000480952 IFNL2Q8IZJ0 200 aa18.64■□□□□ 0.57
NDC1-202ENST00000480952 CCDC87Q9NVE4 849 aa18.64■□□□□ 0.57
NDC1-202ENST00000480952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
NDC1-202ENST00000480952 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
NDC1-202ENST00000480952 RBM46Q8TBY0 533 aaKnown RBP18.63■□□□□ 0.57
NDC1-202ENST00000480952 ITGB4P16144 1822 aa18.63■□□□□ 0.57
NDC1-202ENST00000480952 PHKG2P15735 406 aa18.62■□□□□ 0.57
NDC1-202ENST00000480952 RFC4P35249 363 aa18.61■□□□□ 0.57
NDC1-202ENST00000480952 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
NDC1-202ENST00000480952 C9orf131Q5VYM1 1079 aa18.61■□□□□ 0.57
NDC1-202ENST00000480952 ARHGEF1Q92888 912 aaKnown RBP18.61■□□□□ 0.57
NDC1-202ENST00000480952 EYA1Q99502 592 aa18.61■□□□□ 0.57
NDC1-202ENST00000480952 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
NDC1-202ENST00000480952 PARP3Q9Y6F1 533 aa18.61■□□□□ 0.57
NDC1-202ENST00000480952 WASHC2AQ641Q2 1341 aa18.59■□□□□ 0.57
NDC1-202ENST00000480952 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
NDC1-202ENST00000480952 ADRA2BP18089 450 aa18.59■□□□□ 0.57
NDC1-202ENST00000480952 HTRA3P83110 453 aa18.59■□□□□ 0.57
NDC1-202ENST00000480952 KLRG1Q96E93 195 aa18.59■□□□□ 0.57
NDC1-202ENST00000480952 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
NDC1-202ENST00000480952 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
NDC1-202ENST00000480952 PKD1L3Q7Z443 1732 aa18.58■□□□□ 0.57
NDC1-202ENST00000480952 GYS1P13807 737 aa18.58■□□□□ 0.56
NDC1-202ENST00000480952 FSTL1Q12841 308 aa18.58■□□□□ 0.56
NDC1-202ENST00000480952 COL13A1Q5TAT6 717 aaPredicted RBP18.58■□□□□ 0.56
NDC1-202ENST00000480952 RC3H1Q5TC82 1133 aaKnown RBP18.58■□□□□ 0.56
NDC1-202ENST00000480952 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
NDC1-202ENST00000480952 PIM2Q9P1W9 311 aa18.57■□□□□ 0.56
NDC1-202ENST00000480952 KDM2BQ8NHM5 1336 aa18.56■□□□□ 0.56
NDC1-202ENST00000480952 RPS6KA4O75676 772 aa18.56■□□□□ 0.56
NDC1-202ENST00000480952 KCNA3P22001 575 aa18.56■□□□□ 0.56
NDC1-202ENST00000480952 JMYQ8N9B5 988 aa18.56■□□□□ 0.56
NDC1-202ENST00000480952 SLC4A9Q96Q91 983 aa18.56■□□□□ 0.56
NDC1-202ENST00000480952 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
NDC1-202ENST00000480952 ERVV-2B6SEH9 535 aa18.55■□□□□ 0.56
NDC1-202ENST00000480952 CAPN15O75808 1086 aa18.55■□□□□ 0.56
NDC1-202ENST00000480952 DALRD3Q5D0E6 543 aaKnown RBP18.55■□□□□ 0.56
NDC1-202ENST00000480952 RRAGCQ9HB90 399 aa18.55■□□□□ 0.56
NDC1-202ENST00000480952 N4BP2Q86UW6 1770 aaPredicted RBP18.55■□□□□ 0.56
NDC1-202ENST00000480952 CNTNAP4Q9C0A0 1308 aa18.54■□□□□ 0.56
NDC1-202ENST00000480952 RNF181Q9P0P0 153 aa18.54■□□□□ 0.56
NDC1-202ENST00000480952 KDRP35968 1356 aa18.54■□□□□ 0.56
NDC1-202ENST00000480952 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
NDC1-202ENST00000480952 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
NDC1-202ENST00000480952 KIF13BQ9NQT8 1826 aa18.53■□□□□ 0.56
NDC1-202ENST00000480952 KIF20BQ96Q89 1820 aa18.52■□□□□ 0.56
NDC1-202ENST00000480952 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
NDC1-202ENST00000480952 KIAA1551Q9HCM1 1747 aa18.52■□□□□ 0.55
NDC1-202ENST00000480952 CABP4P57796 275 aa18.51■□□□□ 0.55
NDC1-202ENST00000480952 TNS4Q8IZW8 715 aa18.51■□□□□ 0.55
NDC1-202ENST00000480952 KCPQ6ZWJ8 1503 aa18.5■□□□□ 0.55
NDC1-202ENST00000480952 C4AP0C0L4 1744 aa18.5■□□□□ 0.55
NDC1-202ENST00000480952 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
NDC1-202ENST00000480952 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
NDC1-202ENST00000480952 PTCD1O75127 700 aaKnown RBP18.49■□□□□ 0.55
NDC1-202ENST00000480952 TNNT2P45379 298 aaPredicted RBP18.49■□□□□ 0.55
NDC1-202ENST00000480952 PLEKHO1Q53GL0 409 aaPredicted RBP18.49■□□□□ 0.55
NDC1-202ENST00000480952 SMC1BQ8NDV3 1235 aa18.49■□□□□ 0.55
NDC1-202ENST00000480952 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
NDC1-202ENST00000480952 CHRNA5P30532 468 aa18.48■□□□□ 0.55
NDC1-202ENST00000480952 FKBP8Q14318 412 aa18.48■□□□□ 0.55
NDC1-202ENST00000480952 CRKLP46109 303 aaKnown RBP18.47■□□□□ 0.55
NDC1-202ENST00000480952 DDR1Q08345 913 aa18.47■□□□□ 0.55
NDC1-202ENST00000480952 MTHFSP49914 203 aa18.46■□□□□ 0.55
NDC1-202ENST00000480952 PRELPP51888 382 aa18.46■□□□□ 0.55
NDC1-202ENST00000480952 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
NDC1-202ENST00000480952 USP42Q9H9J4 1324 aaKnown RBP18.46■□□□□ 0.55
NDC1-202ENST00000480952 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
NDC1-202ENST00000480952 ZPR1O75312 459 aa18.43■□□□□ 0.54
NDC1-202ENST00000480952 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
NDC1-202ENST00000480952 NFATC2IPQ8NCF5 419 aa18.43■□□□□ 0.54
NDC1-202ENST00000480952 PCNTO95613 3336 aa18.43■□□□□ 0.54
NDC1-202ENST00000480952 ZNF831Q5JPB2 1677 aa18.42■□□□□ 0.54
NDC1-202ENST00000480952 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
NDC1-202ENST00000480952 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
NDC1-202ENST00000480952 TM4SF1P30408 202 aa18.42■□□□□ 0.54
NDC1-202ENST00000480952 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
NDC1-202ENST00000480952 KDM6AO15550 1401 aaPredicted RBP18.41■□□□□ 0.54
NDC1-202ENST00000480952 ANKRD26Q9UPS8 1709 aa18.41■□□□□ 0.54
NDC1-202ENST00000480952 RASSF7Q02833 373 aa18.41■□□□□ 0.54
NDC1-202ENST00000480952 ARFGEF1Q9Y6D6 1849 aa18.41■□□□□ 0.54
NDC1-202ENST00000480952 ZC3H4Q9UPT8 1303 aaKnown RBP18.41■□□□□ 0.54
NDC1-202ENST00000480952 GLTPD2A6NH11 291 aa18.4■□□□□ 0.54
NDC1-202ENST00000480952 HSPA1AP0DMV8 641 aaKnown RBP18.4■□□□□ 0.54
NDC1-202ENST00000480952 HSPA1BP0DMV9 641 aaKnown RBP18.4■□□□□ 0.54
NDC1-202ENST00000480952 LMNB1P20700 586 aa18.4■□□□□ 0.54
NDC1-202ENST00000480952 USPL1Q5W0Q7 1092 aa18.4■□□□□ 0.54
NDC1-202ENST00000480952 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
NDC1-202ENST00000480952 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
NDC1-202ENST00000480952 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
NDC1-202ENST00000480952 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
NDC1-202ENST00000480952 AEBP1Q8IUX7 1158 aa18.36■□□□□ 0.53
NDC1-202ENST00000480952 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
NDC1-202ENST00000480952 TTLL6Q8N841 843 aa18.36■□□□□ 0.53
NDC1-202ENST00000480952 TNRC6CQ9HCJ0 1690 aaKnown RBP18.36■□□□□ 0.53
NDC1-202ENST00000480952 NFIXQ14938 502 aa18.35■□□□□ 0.53
NDC1-202ENST00000480952 SULT6B1Q6IMI4 303 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms