RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 PIF1Q9H611 641 aa8.29□□□□□ -1.08
SGIP1-209ENST00000480548 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
SGIP1-209ENST00000480548 ARID5AQ03989 594 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 PDE3BQ13370 1112 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 SOGA3Q5TF21 947 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 EGFLAMQ63HQ2 1017 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 SCUBE3Q8IX30 993 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 MICAL1Q8TDZ2 1067 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 THAP11Q96EK4 314 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 WWC3Q9ULE0 1092 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 INPP5FQ9Y2H2 1132 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 PCDHB11Q9Y5F2 797 aa8.28□□□□□ -1.08
SGIP1-209ENST00000480548 MAGEB6P1A0A0J9YX57 407 aa8.27□□□□□ -1.09
SGIP1-209ENST00000480548 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
SGIP1-209ENST00000480548 RBL2Q08999 1139 aa8.27□□□□□ -1.09
SGIP1-209ENST00000480548 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
SGIP1-209ENST00000480548 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
SGIP1-209ENST00000480548 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
SGIP1-209ENST00000480548 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
SGIP1-209ENST00000480548 NR1I2O75469 434 aa8.26□□□□□ -1.09
SGIP1-209ENST00000480548 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
SGIP1-209ENST00000480548 EIF1AXP47813 144 aaKnown RBP8.26□□□□□ -1.09
SGIP1-209ENST00000480548 ALKBH2Q6NS38 261 aa8.26□□□□□ -1.09
SGIP1-209ENST00000480548 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
SGIP1-209ENST00000480548 SETDB2Q96T68 719 aa8.26□□□□□ -1.09
SGIP1-209ENST00000480548 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
SGIP1-209ENST00000480548 GPR182O15218 404 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 FZD6O60353 706 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 NLGN1Q8N2Q7 840 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
SGIP1-209ENST00000480548 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
SGIP1-209ENST00000480548 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 FAM129BQ96TA1 746 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
SGIP1-209ENST00000480548 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 ESPNB1AK53 854 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 IGHA2P01877 340 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 CERS3Q8IU89 383 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 ALKBH8Q96BT7 664 aaKnown RBP8.24□□□□□ -1.09
SGIP1-209ENST00000480548 GPATCH3Q96I76 525 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 SAP130Q9H0E3 1048 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 OSBPL2Q9H1P3 480 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
SGIP1-209ENST00000480548 MYCP01106 439 aaPredicted RBP8.23□□□□□ -1.09
SGIP1-209ENST00000480548 IGBP1P78318 339 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
SGIP1-209ENST00000480548 PTPROQ16827 1216 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 ALG1LQ6GMV1 187 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 ZNF654Q8IZM8 581 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 SLC10A4Q96EP9 437 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 UNC93B1Q9H1C4 597 aa8.23□□□□□ -1.09
SGIP1-209ENST00000480548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.09
SGIP1-209ENST00000480548 DDX41Q9UJV9 622 aaKnown RBP8.23□□□□□ -1.09
SGIP1-209ENST00000480548 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 GNA15P30679 374 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 TCEAL1Q15170 157 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
SGIP1-209ENST00000480548 SH3RF1Q7Z6J0 888 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 VPS37DQ86XT2 251 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 SCUBE2Q9NQ36 999 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 PCDHGB7Q9Y5F8 929 aa8.22□□□□□ -1.09
SGIP1-209ENST00000480548 ARHGAP33O14559 1287 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 STK10O94804 968 aaKnown RBP8.21□□□□□ -1.1
SGIP1-209ENST00000480548 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
SGIP1-209ENST00000480548 IBSPP21815 317 aaPredicted RBP8.21□□□□□ -1.1
SGIP1-209ENST00000480548 MMP16P51512 607 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 BMS1Q14692 1282 aaKnown RBP8.21□□□□□ -1.1
SGIP1-209ENST00000480548 ZNF394Q53GI3 561 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.1
SGIP1-209ENST00000480548 NIF3L1Q9GZT8 377 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 STIM2Q9P246 746 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 VPS9D1Q9Y2B5 631 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 PCDHB3Q9Y5E6 796 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 ATAD2Q6PL18 1390 aa8.21□□□□□ -1.1
SGIP1-209ENST00000480548 AGERQ15109 404 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 USP48Q86UV5 1035 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 JAZF1Q86VZ6 243 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 MCF2L2Q86YR7 1114 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 TNS4Q8IZW8 715 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 KCNB2Q92953 911 aa8.2□□□□□ -1.1
SGIP1-209ENST00000480548 METTL14Q9HCE5 456 aaKnown RBP8.2□□□□□ -1.1
SGIP1-209ENST00000480548 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.2□□□□□ -1.1
SGIP1-209ENST00000480548 CLSTN1O94985 981 aa8.19□□□□□ -1.1
SGIP1-209ENST00000480548 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
SGIP1-209ENST00000480548 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
SGIP1-209ENST00000480548 BPHLQ86WA6 291 aaPredicted RBP8.19□□□□□ -1.1
SGIP1-209ENST00000480548 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
SGIP1-209ENST00000480548 FAM160A2Q8N612 972 aaPredicted RBP8.19□□□□□ -1.1
SGIP1-209ENST00000480548 PRDM9Q9NQV7 894 aa8.19□□□□□ -1.1
SGIP1-209ENST00000480548 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms