RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 ZMYND10O75800 440 aa10.3□□□□□ -0.76
SSR1-206ENST00000479365 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
SSR1-206ENST00000479365 SF3B2Q13435 895 aaKnown RBP10.3□□□□□ -0.76
SSR1-206ENST00000479365 TCP11L2Q8N4U5 519 aa10.3□□□□□ -0.76
SSR1-206ENST00000479365 TESK2Q96S53 571 aa10.3□□□□□ -0.76
SSR1-206ENST00000479365 SRCAPQ6ZRS2 3230 aa10.3□□□□□ -0.76
SSR1-206ENST00000479365 TTC21AQ8NDW8 1320 aa10.3□□□□□ -0.76
SSR1-206ENST00000479365 MON2Q7Z3U7 1717 aa10.3□□□□□ -0.76
SSR1-206ENST00000479365 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
SSR1-206ENST00000479365 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
SSR1-206ENST00000479365 ARHGEF25Q86VW2 580 aa10.29□□□□□ -0.76
SSR1-206ENST00000479365 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
SSR1-206ENST00000479365 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
SSR1-206ENST00000479365 CRB1P82279 1406 aa10.28□□□□□ -0.76
SSR1-206ENST00000479365 ST20-MTHFSA0A0A6YYL1 179 aa10.28□□□□□ -0.76
SSR1-206ENST00000479365 BAG6P46379 1132 aa10.28□□□□□ -0.76
SSR1-206ENST00000479365 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
SSR1-206ENST00000479365 NME9Q86XW9 330 aa10.28□□□□□ -0.76
SSR1-206ENST00000479365 USP31Q70CQ4 1352 aa10.27□□□□□ -0.76
SSR1-206ENST00000479365 RGPD1P0DJD0 1748 aa10.27□□□□□ -0.76
SSR1-206ENST00000479365 DISP2A7MBM2 1401 aa10.27□□□□□ -0.77
SSR1-206ENST00000479365 TRIM37O94972 964 aa10.27□□□□□ -0.77
SSR1-206ENST00000479365 MLLT3P42568 568 aaPredicted RBP10.27□□□□□ -0.77
SSR1-206ENST00000479365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.772e-7■□□□□ 10
SSR1-206ENST00000479365 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
SSR1-206ENST00000479365 MARVELD3Q96A59 401 aa10.27□□□□□ -0.77
SSR1-206ENST00000479365 THRAP3Q9Y2W1 955 aaKnown RBP10.27□□□□□ -0.77
SSR1-206ENST00000479365 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
SSR1-206ENST00000479365 USP54Q70EL1 1684 aa10.26□□□□□ -0.77
SSR1-206ENST00000479365 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
SSR1-206ENST00000479365 FAM196AQ6ZSG2 479 aa10.26□□□□□ -0.77
SSR1-206ENST00000479365 KCNH5Q8NCM2 988 aa10.26□□□□□ -0.77
SSR1-206ENST00000479365 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
SSR1-206ENST00000479365 PARP4Q9UKK3 1724 aaKnown RBP10.26□□□□□ -0.77
SSR1-206ENST00000479365 WDR17Q8IZU2 1322 aa10.26□□□□□ -0.77
SSR1-206ENST00000479365 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
SSR1-206ENST00000479365 PDE3BQ13370 1112 aa10.25□□□□□ -0.77
SSR1-206ENST00000479365 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
SSR1-206ENST00000479365 TOM1L2Q6ZVM7 507 aa10.25□□□□□ -0.77
SSR1-206ENST00000479365 DDX12PQ92771 950 aa10.25□□□□□ -0.77
SSR1-206ENST00000479365 PUS7Q96PZ0 661 aaKnown RBP10.25□□□□□ -0.77
SSR1-206ENST00000479365 CAMKK2Q96RR4 588 aa10.25□□□□□ -0.77
SSR1-206ENST00000479365 LHX6Q9UPM6 363 aa10.25□□□□□ -0.77
SSR1-206ENST00000479365 LRRC37A3O60309 1634 aa10.25□□□□□ -0.77
SSR1-206ENST00000479365 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
SSR1-206ENST00000479365 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
SSR1-206ENST00000479365 HDGFL2Q7Z4V5 671 aaPredicted RBP10.24□□□□□ -0.77
SSR1-206ENST00000479365 PEAK1Q9H792 1746 aa10.24□□□□□ -0.77
SSR1-206ENST00000479365 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
SSR1-206ENST00000479365 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
SSR1-206ENST00000479365 RGPD5Q99666 1765 aa10.23□□□□□ -0.77
SSR1-206ENST00000479365 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
SSR1-206ENST00000479365 USP47Q96K76 1375 aa10.23□□□□□ -0.77
SSR1-206ENST00000479365 ABCC6O95255 1503 aa10.23□□□□□ -0.77
SSR1-206ENST00000479365 APBA3O96018 575 aa10.22□□□□□ -0.77
SSR1-206ENST00000479365 DDB1Q16531 1140 aa10.22□□□□□ -0.77
SSR1-206ENST00000479365 PTF1AQ7RTS3 328 aa10.22□□□□□ -0.77
SSR1-206ENST00000479365 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
SSR1-206ENST00000479365 TERF2IPQ9NYB0 399 aa10.22□□□□□ -0.77
SSR1-206ENST00000479365 CSB-PGBD3P0DP91 1061 aa10.21□□□□□ -0.77
SSR1-206ENST00000479365 EMP3P54852 163 aa10.21□□□□□ -0.77
SSR1-206ENST00000479365 SMYD5Q6GMV2 418 aa10.21□□□□□ -0.77
SSR1-206ENST00000479365 MARCH10Q8NA82 808 aaPredicted RBP10.21□□□□□ -0.77
SSR1-206ENST00000479365 PCGF6Q9BYE7 350 aa10.21□□□□□ -0.77
SSR1-206ENST00000479365 ERBB3P21860 1342 aa10.21□□□□□ -0.78
SSR1-206ENST00000479365 NINLQ9Y2I6 1382 aa10.21□□□□□ -0.78
SSR1-206ENST00000479365 OVOS2A0A0G2JMS6 1433 aa10.21□□□□□ -0.78
SSR1-206ENST00000479365 PTGER2P43116 358 aa10.2□□□□□ -0.78
SSR1-206ENST00000479365 R3HDM1Q15032 1099 aaKnown RBP10.2□□□□□ -0.78
SSR1-206ENST00000479365 RREB1Q92766 1687 aa10.2□□□□□ -0.78
SSR1-206ENST00000479365 PODXL2Q9NZ53 605 aa10.2□□□□□ -0.78
SSR1-206ENST00000479365 LTN1O94822 1766 aa10.19□□□□□ -0.78
SSR1-206ENST00000479365 ANKRD36BQ8N2N9 1353 aa10.19□□□□□ -0.78
SSR1-206ENST00000479365 PARD3Q8TEW0 1356 aa10.19□□□□□ -0.78
SSR1-206ENST00000479365 FBLN1P23142 703 aa10.19□□□□□ -0.78
SSR1-206ENST00000479365 ZNF454Q8N9F8 522 aa10.19□□□□□ -0.78
SSR1-206ENST00000479365 NUP188Q5SRE5 1749 aa10.19□□□□□ -0.78
SSR1-206ENST00000479365 LRP5O75197 1615 aa10.18□□□□□ -0.78
SSR1-206ENST00000479365 CCDC7Q96M83 1385 aa10.18□□□□□ -0.78
SSR1-206ENST00000479365 PRIM1P49642 420 aaKnown RBP10.18□□□□□ -0.78
SSR1-206ENST00000479365 TMF1P82094 1093 aa10.18□□□□□ -0.78
SSR1-206ENST00000479365 ANKRD24Q8TF21 1146 aa10.18□□□□□ -0.78
SSR1-206ENST00000479365 CDCA7Q9BWT1 371 aaPredicted RBP10.18□□□□□ -0.78
SSR1-206ENST00000479365 NLRP2Q9NX02 1062 aa10.18□□□□□ -0.78
SSR1-206ENST00000479365 PCDHGA10Q9Y5H3 936 aa10.18□□□□□ -0.78
SSR1-206ENST00000479365 BCL9O00512 1426 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 MAP3K19Q56UN5 1328 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 FAM205CA6NFA0 338 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 FOSBP53539 338 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 VARS2Q5ST30 1063 aaKnown RBP10.17□□□□□ -0.78
SSR1-206ENST00000479365 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
SSR1-206ENST00000479365 EXOC5O00471 708 aa10.16□□□□□ -0.78
SSR1-206ENST00000479365 FYB1O15117 783 aa10.16□□□□□ -0.78
SSR1-206ENST00000479365 PHF14O94880 888 aa10.16□□□□□ -0.78
SSR1-206ENST00000479365 IP6K1Q92551 441 aa10.16□□□□□ -0.78
SSR1-206ENST00000479365 COG3Q96JB2 828 aa10.16□□□□□ -0.78
SSR1-206ENST00000479365 MYOM1P52179 1685 aa10.15□□□□□ -0.78
SSR1-206ENST00000479365 POTEB3A0JP26 581 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms