RNA–Protein interactions for RNA: ENST00000479187.5

LRRK2-206, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 8,306 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-206ENST00000479187 PDILTQ8N807 584 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 CCDC85AQ96PX6 553 aaPredicted RBP5.36□□□□□ -1.55
LRRK2-206ENST00000479187 ATAD2Q6PL18 1390 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 IPO7O95373 1038 aaKnown RBP5.36□□□□□ -1.55
LRRK2-206ENST00000479187 PPP2R3CQ969Q6 453 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 BMP2KQ9NSY1 1161 aaPredicted RBP5.36□□□□□ -1.55
LRRK2-206ENST00000479187 ATP5J2-PTCD1G3V325 749 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 PPIP5K2O43314 1243 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 GPTP24298 496 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 UBXN2AP68543 259 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 FBXO31Q5XUX0 539 aaPredicted RBP5.36□□□□□ -1.55
LRRK2-206ENST00000479187 USP48Q86UV5 1035 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 C2CD5Q86YS7 1000 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 GTF3C6Q969F1 213 aa5.36□□□□□ -1.55
LRRK2-206ENST00000479187 CBX1P83916 185 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 IFIT5Q13325 482 aaKnown RBP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 FAM47CQ5HY64 1035 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 AXDND1Q5T1B0 1012 aaPredicted RBP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 NIP7Q9Y221 180 aaKnown RBP eCLIP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 CCDC82Q8N4S0 544 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 DPF3Q92784 378 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 CNKSR1Q969H4 720 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 RPRD2Q5VT52 1461 aaKnown RBP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 SULT6B1Q6IMI4 303 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 RGS22Q8NE09 1264 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 KCNA6P17658 529 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 DPP8Q6V1X1 898 aaPredicted RBP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 UBAC1Q9BSL1 405 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 AS3MTQ9HBK9 375 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 GRIPAP1Q4V328 841 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 FSD1Q9BTV5 496 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 OSBPP22059 807 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 TNFAIP1Q13829 316 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 SPINK5Q9NQ38 1064 aaPredicted RBP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 GNAT3A8MTJ3 354 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 LIG1P18858 919 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 CLASRPQ8N2M8 674 aaKnown RBP5.35□□□□□ -1.55
LRRK2-206ENST00000479187 SSX2IPQ9Y2D8 614 aa5.35□□□□□ -1.55
LRRK2-206ENST00000479187 PANK3Q9H999 370 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 LAMC3Q9Y6N6 1575 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 R3HDM1Q15032 1099 aaKnown RBP5.34□□□□□ -1.55
LRRK2-206ENST00000479187 CCDC125Q86Z20 511 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 RNF181Q9P0P0 153 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 NINLQ9Y2I6 1382 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 AFF2P51816 1311 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 FKBP4Q02790 459 aaKnown RBP eCLIP5.34□□□□□ -1.55
LRRK2-206ENST00000479187 NLGN1Q8N2Q7 840 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 LRRCC1Q9C099 1032 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 CHMP5Q9NZZ3 219 aa5.34□□□□□ -1.55
LRRK2-206ENST00000479187 MAGI1Q96QZ7 1491 aaPredicted RBP5.34□□□□□ -1.56
LRRK2-206ENST00000479187 HIP1O00291 1037 aa5.34□□□□□ -1.56
LRRK2-206ENST00000479187 GNAI3P08754 354 aa5.34□□□□□ -1.56
LRRK2-206ENST00000479187 MRPS9P82933 396 aaKnown RBP5.34□□□□□ -1.56
LRRK2-206ENST00000479187 ARID5AQ03989 594 aa5.34□□□□□ -1.56
LRRK2-206ENST00000479187 HSPA5P11021 654 aaKnown RBP5.33□□□□□ -1.56
LRRK2-206ENST00000479187 NUCB2P80303 420 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 ZNF354CQ86Y25 554 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 MICALL1Q8N3F8 863 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 SPATA32Q96LK8 384 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 NSFL1CQ9UNZ2 370 aaKnown RBP5.33□□□□□ -1.56
LRRK2-206ENST00000479187 DCAF15Q66K64 600 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 GADL1Q6ZQY3 521 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.33□□□□□ -1.56
LRRK2-206ENST00000479187 HACE1Q8IYU2 909 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 RETREG2Q8NC44 543 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 CABLES1Q8TDN4 633 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 LRRC45Q96CN5 670 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 SIRT1Q96EB6 747 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 UHRF1BP1LA0JNW5 1464 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 IDH1O75874 414 aaKnown RBP5.33□□□□□ -1.56
LRRK2-206ENST00000479187 ANKRD2Q9GZV1 360 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 LRFN2Q9ULH4 789 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 KCNH4Q9UQ05 1017 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 SAMM50Q9Y512 469 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 CCNA1P78396 465 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 MAP3K12Q12852 859 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 MAST3O60307 1309 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 SYAP1Q96A49 352 aaPredicted RBP5.33□□□□□ -1.56
LRRK2-206ENST00000479187 ERBINQ96RT1 1412 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 KDM4AO75164 1064 aa5.33□□□□□ -1.56
LRRK2-206ENST00000479187 BAG4O95429 457 aaKnown RBP5.32□□□□□ -1.56
LRRK2-206ENST00000479187 DLGAP5Q15398 846 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 CCDC70Q6NSX1 233 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 SEPT12Q8IYM1 358 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 KCNG4Q8TDN1 519 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 MICAL1Q8TDZ2 1067 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 DDX11Q96FC9 970 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 FAM193BQ96PV7 902 aaPredicted RBP5.32□□□□□ -1.56
LRRK2-206ENST00000479187 RBM28Q9NW13 759 aaKnown RBP5.32□□□□□ -1.56
LRRK2-206ENST00000479187 TIMELESSQ9UNS1 1208 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 SMARCA4P51532 1647 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 SLC10A4Q96EP9 437 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 PDZRN3Q9UPQ7 1066 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 SSBP05455 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
LRRK2-206ENST00000479187 NBPF1Q3BBV0 1214 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 SUPT20HL1Q3ZLR7 823 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 CFAP70Q5T0N1 1121 aa5.32□□□□□ -1.56
LRRK2-206ENST00000479187 LARP1Q6PKG0 1096 aaKnown RBP5.32□□□□□ -1.56
LRRK2-206ENST00000479187 DZIP3Q86Y13 1208 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms