RNA–Protein interactions for RNA: ENST00000478708.2

PDPK1-211, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-211ENST00000478708 AEBP1Q8IUX7 1158 aa25.82■■□□□ 1.72
PDPK1-211ENST00000478708 RTCBQ9Y3I0 505 aaKnown RBP25.82■■□□□ 1.72
PDPK1-211ENST00000478708 GNPATO15228 680 aa25.81■■□□□ 1.72
PDPK1-211ENST00000478708 PHF14O94880 888 aa25.81■■□□□ 1.72
PDPK1-211ENST00000478708 ADRA2BP18089 450 aa25.81■■□□□ 1.72
PDPK1-211ENST00000478708 CD2APQ9Y5K6 639 aa25.81■■□□□ 1.72
PDPK1-211ENST00000478708 GRIN3BO60391 1043 aa25.79■■□□□ 1.72
PDPK1-211ENST00000478708 TRAPPC3LQ5T215 181 aa25.79■■□□□ 1.72
PDPK1-211ENST00000478708 RC3H1Q5TC82 1133 aaKnown RBP25.79■■□□□ 1.72
PDPK1-211ENST00000478708 NUDCQ9Y266 331 aa25.79■■□□□ 1.72
PDPK1-211ENST00000478708 C5P01031 1676 aa25.79■■□□□ 1.72
PDPK1-211ENST00000478708 LINC00116Q8NCU8 138 aa25.78■■□□□ 1.72
PDPK1-211ENST00000478708 MSL1Q68DK7 614 aa25.77■■□□□ 1.72
PDPK1-211ENST00000478708 NFATC2IPQ8NCF5 419 aa25.77■■□□□ 1.72
PDPK1-211ENST00000478708 PELP1Q8IZL8 1130 aaKnown RBP25.76■■□□□ 1.71
PDPK1-211ENST00000478708 TOGARAM1Q9Y4F4 1720 aa25.76■■□□□ 1.71
PDPK1-211ENST00000478708 ITGB4P16144 1822 aa25.75■■□□□ 1.71
PDPK1-211ENST00000478708 C4BP0C0L5 1744 aa25.75■■□□□ 1.71
PDPK1-211ENST00000478708 HMOX1P09601 288 aa25.75■■□□□ 1.71
PDPK1-211ENST00000478708 NLGN1Q8N2Q7 840 aa25.75■■□□□ 1.71
PDPK1-211ENST00000478708 CNTNAP4Q9C0A0 1308 aa25.74■■□□□ 1.71
PDPK1-211ENST00000478708 U2SURPO15042 1029 aaKnown RBP25.74■■□□□ 1.71
PDPK1-211ENST00000478708 ITPK1Q13572 414 aa25.74■■□□□ 1.71
PDPK1-211ENST00000478708 GAS2L2Q8NHY3 880 aa25.74■■□□□ 1.71
PDPK1-211ENST00000478708 RFC4P35249 363 aa25.73■■□□□ 1.71
PDPK1-211ENST00000478708 CNGB1Q14028 1251 aaPredicted RBP25.73■■□□□ 1.71
PDPK1-211ENST00000478708 KDM6AO15550 1401 aaPredicted RBP25.72■■□□□ 1.71
PDPK1-211ENST00000478708 SLC52A2Q9HAB3 445 aa25.72■■□□□ 1.71
PDPK1-211ENST00000478708 PTCD1O75127 700 aaKnown RBP25.71■■□□□ 1.71
PDPK1-211ENST00000478708 RPS6KA4O75676 772 aa25.7■■□□□ 1.7
PDPK1-211ENST00000478708 RNMTO43148 476 aaKnown RBP25.67■■□□□ 1.7
PDPK1-211ENST00000478708 NEFMP07197 916 aa25.67■■□□□ 1.7
PDPK1-211ENST00000478708 TTC5Q8N0Z6 440 aa25.67■■□□□ 1.7
PDPK1-211ENST00000478708 COL24A1Q17RW2 1714 aa25.66■■□□□ 1.7
PDPK1-211ENST00000478708 MTHFSDQ2M296 383 aaKnown RBP25.66■■□□□ 1.7
PDPK1-211ENST00000478708 TAF1LQ8IZX4 1826 aa25.65■■□□□ 1.7
PDPK1-211ENST00000478708 TEFQ10587 303 aa25.65■■□□□ 1.7
PDPK1-211ENST00000478708 NLGN2Q8NFZ4 835 aa25.65■■□□□ 1.7
PDPK1-211ENST00000478708 GNAT3A8MTJ3 354 aa25.64■■□□□ 1.7
PDPK1-211ENST00000478708 VSIG10Q8N0Z9 540 aa25.64■■□□□ 1.7
PDPK1-211ENST00000478708 TUBGCP6Q96RT7 1819 aa25.64■■□□□ 1.7
PDPK1-211ENST00000478708 ZNF831Q5JPB2 1677 aa25.64■■□□□ 1.69
PDPK1-211ENST00000478708 ARHGEF1Q92888 912 aaKnown RBP25.63■■□□□ 1.69
PDPK1-211ENST00000478708 MMP10P09238 476 aa25.62■■□□□ 1.69
PDPK1-211ENST00000478708 CRKLP46109 303 aaKnown RBP25.62■■□□□ 1.69
PDPK1-211ENST00000478708 SLC4A9Q96Q91 983 aa25.62■■□□□ 1.69
PDPK1-211ENST00000478708 CCDC87Q9NVE4 849 aa25.62■■□□□ 1.69
PDPK1-211ENST00000478708 PARP3Q9Y6F1 533 aa25.62■■□□□ 1.69
PDPK1-211ENST00000478708 TEX13AQ9BXU3 409 aaPredicted RBP25.61■■□□□ 1.69
PDPK1-211ENST00000478708 LGR6Q9HBX8 967 aa25.61■■□□□ 1.69
PDPK1-211ENST00000478708 ZPR1O75312 459 aa25.6■■□□□ 1.69
PDPK1-211ENST00000478708 STARD3NLO95772 234 aa25.6■■□□□ 1.69
PDPK1-211ENST00000478708 NPM2Q86SE8 214 aaKnown RBP25.6■■□□□ 1.69
PDPK1-211ENST00000478708 AMIGO3Q86WK7 504 aa25.6■■□□□ 1.69
PDPK1-211ENST00000478708 U2AF1L5P0DN76 240 aaPredicted RBP25.59■■□□□ 1.69
PDPK1-211ENST00000478708 TGFB2P61812 414 aa25.59■■□□□ 1.69
PDPK1-211ENST00000478708 U2AF1Q01081 240 aaKnown RBP eCLIP25.59■■□□□ 1.69
PDPK1-211ENST00000478708 RTF1Q92541 710 aaKnown RBP25.59■■□□□ 1.69
PDPK1-211ENST00000478708 FCHSD2O94868 740 aa25.58■■□□□ 1.69
PDPK1-211ENST00000478708 PPP2R1AP30153 589 aa25.58■■□□□ 1.69
PDPK1-211ENST00000478708 ZNF784Q8NCA9 323 aaPredicted RBP25.58■■□□□ 1.69
PDPK1-211ENST00000478708 PNNQ9H307 717 aaKnown RBP25.58■■□□□ 1.69
PDPK1-211ENST00000478708 UBR3Q6ZT12 1888 aa25.57■■□□□ 1.68
PDPK1-211ENST00000478708 MRC1P22897 1456 aa25.55■■□□□ 1.68
PDPK1-211ENST00000478708 GYS1P13807 737 aa25.55■■□□□ 1.68
PDPK1-211ENST00000478708 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
PDPK1-211ENST00000478708 COL3A1P02461 1466 aaPredicted RBP25.54■■□□□ 1.68
PDPK1-211ENST00000478708 SMIM5Q71RC9 77 aa25.54■■□□□ 1.68
PDPK1-211ENST00000478708 A0A087WZG4 1122 aa25.53■■□□□ 1.68
PDPK1-211ENST00000478708 DNAJC10Q8IXB1 793 aa25.53■■□□□ 1.68
PDPK1-211ENST00000478708 SLC39A6Q13433 755 aa25.52■■□□□ 1.68
PDPK1-211ENST00000478708 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
PDPK1-211ENST00000478708 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
PDPK1-211ENST00000478708 HTATSF1O43719 755 aaKnown RBP25.51■■□□□ 1.67
PDPK1-211ENST00000478708 CYP19A1P11511 503 aaPredicted RBP25.51■■□□□ 1.67
PDPK1-211ENST00000478708 YBX3P16989 372 aaKnown RBP eCLIP25.51■■□□□ 1.67
PDPK1-211ENST00000478708 ZNF790Q6PG37 636 aa25.51■■□□□ 1.67
PDPK1-211ENST00000478708 FMNL2Q96PY5 1086 aa25.51■■□□□ 1.67
PDPK1-211ENST00000478708 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
PDPK1-211ENST00000478708 INTS5Q6P9B9 1019 aaKnown RBP25.5■■□□□ 1.67
PDPK1-211ENST00000478708 BTBD11A6QL63 1104 aa25.48■■□□□ 1.67
PDPK1-211ENST00000478708 IL17REQ8NFR9 667 aa25.48■■□□□ 1.67
PDPK1-211ENST00000478708 SOS1Q07889 1333 aaPredicted RBP25.47■■□□□ 1.67
PDPK1-211ENST00000478708 NARFQ9UHQ1 456 aa25.47■■□□□ 1.67
PDPK1-211ENST00000478708 CHD4Q14839 1912 aa25.46■■□□□ 1.67
PDPK1-211ENST00000478708 RALBP1Q15311 655 aa25.45■■□□□ 1.66
PDPK1-211ENST00000478708 COL5A3P25940 1745 aaPredicted RBP25.45■■□□□ 1.66
PDPK1-211ENST00000478708 CICQ96RK0 1608 aaPredicted RBP25.45■■□□□ 1.66
PDPK1-211ENST00000478708 CEMIPQ8WUJ3 1361 aa25.44■■□□□ 1.66
PDPK1-211ENST00000478708 COL15A1P39059 1388 aa25.44■■□□□ 1.66
PDPK1-211ENST00000478708 HEG1Q9ULI3 1381 aa25.44■■□□□ 1.66
PDPK1-211ENST00000478708 GIGYF1O75420 1035 aaPredicted RBP25.43■■□□□ 1.66
PDPK1-211ENST00000478708 FKBP8Q14318 412 aa25.43■■□□□ 1.66
PDPK1-211ENST00000478708 PHACTR3Q96KR7 559 aa25.43■■□□□ 1.66
PDPK1-211ENST00000478708 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
PDPK1-211ENST00000478708 USPL1Q5W0Q7 1092 aa25.42■■□□□ 1.66
PDPK1-211ENST00000478708 ZNF496Q96IT1 587 aaPredicted RBP25.42■■□□□ 1.66
PDPK1-211ENST00000478708 PIM2Q9P1W9 311 aa25.42■■□□□ 1.66
PDPK1-211ENST00000478708 SRP68Q9UHB9 627 aaKnown RBP25.42■■□□□ 1.66
PDPK1-211ENST00000478708 BCS1LQ9Y276 419 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms