RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SMIM5Q71RC9 77 aa25.36■■□□□ 1.65
SREBF1-212ENST00000478616 COL23A1Q86Y22 540 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-212ENST00000478616 TJP1Q07157 1748 aa25.35■■□□□ 1.65
SREBF1-212ENST00000478616 CICQ96RK0 1608 aaPredicted RBP25.35■■□□□ 1.65
SREBF1-212ENST00000478616 HSP90AB1P08238 724 aaKnown RBP25.35■■□□□ 1.65
SREBF1-212ENST00000478616 LGR6Q9HBX8 967 aa25.35■■□□□ 1.65
SREBF1-212ENST00000478616 SIPA1L3O60292 1781 aaPredicted RBP25.34■■□□□ 1.65
SREBF1-212ENST00000478616 TFCP2L1Q9NZI6 479 aa25.34■■□□□ 1.65
SREBF1-212ENST00000478616 AKAP4Q5JQC9 854 aa25.33■■□□□ 1.65
SREBF1-212ENST00000478616 C1orf141Q5JVX7 400 aa25.31■■□□□ 1.64
SREBF1-212ENST00000478616 NFATC2IPQ8NCF5 419 aa25.31■■□□□ 1.64
SREBF1-212ENST00000478616 RSPH6AQ9H0K4 717 aa25.31■■□□□ 1.64
SREBF1-212ENST00000478616 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
SREBF1-212ENST00000478616 PHACTR3Q96KR7 559 aa25.3■■□□□ 1.64
SREBF1-212ENST00000478616 UBR2Q8IWV8 1755 aa25.29■■□□□ 1.64
SREBF1-212ENST00000478616 CABP4P57796 275 aa25.29■■□□□ 1.64
SREBF1-212ENST00000478616 SLC16A10Q8TF71 515 aa25.29■■□□□ 1.64
SREBF1-212ENST00000478616 RNMTO43148 476 aaKnown RBP25.28■■□□□ 1.64
SREBF1-212ENST00000478616 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
SREBF1-212ENST00000478616 ATP6V1AP38606 617 aa25.27■■□□□ 1.64
SREBF1-212ENST00000478616 PPP1R1BQ9UD71 204 aaPredicted RBP25.26■■□□□ 1.63
SREBF1-212ENST00000478616 DDX10Q13206 875 aaKnown RBP25.25■■□□□ 1.63
SREBF1-212ENST00000478616 SLC52A2Q9HAB3 445 aa25.25■■□□□ 1.63
SREBF1-212ENST00000478616 C4AP0C0L4 1744 aa25.24■■□□□ 1.63
SREBF1-212ENST00000478616 IL17REQ8NFR9 667 aa25.24■■□□□ 1.63
SREBF1-212ENST00000478616 FHDC1Q9C0D6 1143 aaPredicted RBP25.24■■□□□ 1.63
SREBF1-212ENST00000478616 PRKAR2BP31323 418 aa25.23■■□□□ 1.63
SREBF1-212ENST00000478616 DLG5Q8TDM6 1919 aa25.23■■□□□ 1.63
SREBF1-212ENST00000478616 CFAP53Q96M91 514 aa25.22■■□□□ 1.63
SREBF1-212ENST00000478616 ARXQ96QS3 562 aa25.22■■□□□ 1.63
SREBF1-212ENST00000478616 SYT17Q9BSW7 474 aa25.22■■□□□ 1.63
SREBF1-212ENST00000478616 RBM42Q9BTD8 480 aaKnown RBP25.22■■□□□ 1.63
SREBF1-212ENST00000478616 MAP3K5Q99683 1374 aa25.21■■□□□ 1.63
SREBF1-212ENST00000478616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.21■■□□□ 1.63
SREBF1-212ENST00000478616 SLC39A6Q13433 755 aa25.2■■□□□ 1.62
SREBF1-212ENST00000478616 MSL1Q68DK7 614 aa25.2■■□□□ 1.62
SREBF1-212ENST00000478616 AK7Q96M32 723 aa25.2■■□□□ 1.62
SREBF1-212ENST00000478616 CEMIPQ8WUJ3 1361 aa25.19■■□□□ 1.62
SREBF1-212ENST00000478616 PTCD1O75127 700 aaKnown RBP25.19■■□□□ 1.62
SREBF1-212ENST00000478616 GNPATO15228 680 aa25.18■■□□□ 1.62
SREBF1-212ENST00000478616 PHF14O94880 888 aa25.18■■□□□ 1.62
SREBF1-212ENST00000478616 U2AF1L5P0DN76 240 aaPredicted RBP25.18■■□□□ 1.62
SREBF1-212ENST00000478616 SSFA2P28290 1259 aa25.18■■□□□ 1.62
SREBF1-212ENST00000478616 U2AF1Q01081 240 aaKnown RBP eCLIP25.18■■□□□ 1.62
SREBF1-212ENST00000478616 CNTNAP4Q9C0A0 1308 aa25.17■■□□□ 1.62
SREBF1-212ENST00000478616 RC3H1Q5TC82 1133 aaKnown RBP25.16■■□□□ 1.62
SREBF1-212ENST00000478616 FLAD1Q8NFF5 587 aa25.16■■□□□ 1.62
SREBF1-212ENST00000478616 GAS2L2Q8NHY3 880 aa25.16■■□□□ 1.62
SREBF1-212ENST00000478616 UTRNP46939 3433 aa25.15■■□□□ 1.62
SREBF1-212ENST00000478616 GNAT3A8MTJ3 354 aa25.15■■□□□ 1.62
SREBF1-212ENST00000478616 MSH5O43196 834 aa25.15■■□□□ 1.62
SREBF1-212ENST00000478616 FCHSD2O94868 740 aa25.15■■□□□ 1.62
SREBF1-212ENST00000478616 PLEKHF1Q96S99 279 aa25.14■■□□□ 1.62
SREBF1-212ENST00000478616 NUDCQ9Y266 331 aa25.14■■□□□ 1.62
SREBF1-212ENST00000478616 INTS5Q6P9B9 1019 aaKnown RBP25.13■■□□□ 1.61
SREBF1-212ENST00000478616 DNAJC10Q8IXB1 793 aa25.13■■□□□ 1.61
SREBF1-212ENST00000478616 RPS6KA4O75676 772 aa25.11■■□□□ 1.61
SREBF1-212ENST00000478616 HMGB2P26583 209 aaKnown RBP25.11■■□□□ 1.61
SREBF1-212ENST00000478616 POLD1P28340 1107 aa25.11■■□□□ 1.61
SREBF1-212ENST00000478616 CRKLP46109 303 aaKnown RBP25.11■■□□□ 1.61
SREBF1-212ENST00000478616 RALBP1Q15311 655 aa25.11■■□□□ 1.61
SREBF1-212ENST00000478616 NLGN2Q8NFZ4 835 aa25.11■■□□□ 1.61
SREBF1-212ENST00000478616 KIAA1551Q9HCM1 1747 aa25.1■■□□□ 1.61
SREBF1-212ENST00000478616 ARHGEF1Q92888 912 aaKnown RBP25.1■■□□□ 1.61
SREBF1-212ENST00000478616 KCNQ3O43525 872 aa25.09■■□□□ 1.61
SREBF1-212ENST00000478616 KIF13BQ9NQT8 1826 aa25.08■■□□□ 1.61
SREBF1-212ENST00000478616 CYP19A1P11511 503 aaPredicted RBP25.08■■□□□ 1.61
SREBF1-212ENST00000478616 RTCBQ9Y3I0 505 aaKnown RBP25.08■■□□□ 1.61
SREBF1-212ENST00000478616 DCTN1Q14203 1278 aa25.07■■□□□ 1.6
SREBF1-212ENST00000478616 ZNF496Q96IT1 587 aaPredicted RBP25.07■■□□□ 1.6
SREBF1-212ENST00000478616 MCM10Q7L590 875 aa25.06■■□□□ 1.6
SREBF1-212ENST00000478616 TRAPPC3LQ5T215 181 aa25.05■■□□□ 1.6
SREBF1-212ENST00000478616 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
SREBF1-212ENST00000478616 GOLGB1Q14789 3259 aaKnown RBP25.04■■□□□ 1.6
SREBF1-212ENST00000478616 KDM3BQ7LBC6 1761 aa25.04■■□□□ 1.6
SREBF1-212ENST00000478616 GYS1P13807 737 aa25.04■■□□□ 1.6
SREBF1-212ENST00000478616 SOS1Q07889 1333 aaPredicted RBP25.04■■□□□ 1.6
SREBF1-212ENST00000478616 MYBBP1AQ9BQG0 1328 aaKnown RBP25.04■■□□□ 1.6
SREBF1-212ENST00000478616 ADRA2BP18089 450 aa25.03■■□□□ 1.6
SREBF1-212ENST00000478616 TEFQ10587 303 aa25.03■■□□□ 1.6
SREBF1-212ENST00000478616 VSIG10Q8N0Z9 540 aa25.03■■□□□ 1.6
SREBF1-212ENST00000478616 SRP68Q9UHB9 627 aaKnown RBP25.03■■□□□ 1.6
SREBF1-212ENST00000478616 ZBTB1Q9Y2K1 713 aa25.03■■□□□ 1.6
SREBF1-212ENST00000478616 HEG1Q9ULI3 1381 aa25.03■■□□□ 1.6
SREBF1-212ENST00000478616 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
SREBF1-212ENST00000478616 KLHL34Q8N239 644 aa25.02■■□□□ 1.6
SREBF1-212ENST00000478616 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
SREBF1-212ENST00000478616 CCDC87Q9NVE4 849 aa25.02■■□□□ 1.6
SREBF1-212ENST00000478616 CHD4Q14839 1912 aa25■■□□□ 1.59
SREBF1-212ENST00000478616 USP42Q9H9J4 1324 aaKnown RBP24.99■■□□□ 1.59
SREBF1-212ENST00000478616 PRAMEF22A3QJZ6 481 aa24.98■■□□□ 1.59
SREBF1-212ENST00000478616 HTATSF1O43719 755 aaKnown RBP24.98■■□□□ 1.59
SREBF1-212ENST00000478616 MMP10P09238 476 aa24.98■■□□□ 1.59
SREBF1-212ENST00000478616 N4BP2Q86UW6 1770 aaPredicted RBP24.98■■□□□ 1.59
SREBF1-212ENST00000478616 FKBP8Q14318 412 aa24.97■■□□□ 1.59
SREBF1-212ENST00000478616 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
SREBF1-212ENST00000478616 CD2APQ9Y5K6 639 aa24.97■■□□□ 1.59
SREBF1-212ENST00000478616 AFDNP55196 1824 aaKnown RBP24.97■■□□□ 1.59
SREBF1-212ENST00000478616 BTBD11A6QL63 1104 aa24.96■■□□□ 1.59
SREBF1-212ENST00000478616 YBX3P16989 372 aaKnown RBP eCLIP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms