RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 SYT17Q9BSW7 474 aa25.77■■□□□ 1.72
EPHB4-205ENST00000478459 KDRP35968 1356 aa25.77■■□□□ 1.72
EPHB4-205ENST00000478459 UBR3Q6ZT12 1888 aa25.75■■□□□ 1.71
EPHB4-205ENST00000478459 HSP90AB1P08238 724 aaKnown RBP25.75■■□□□ 1.71
EPHB4-205ENST00000478459 POLD1P28340 1107 aa25.75■■□□□ 1.71
EPHB4-205ENST00000478459 SLC16A10Q8TF71 515 aa25.75■■□□□ 1.71
EPHB4-205ENST00000478459 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
EPHB4-205ENST00000478459 COL3A1P02461 1466 aaPredicted RBP25.74■■□□□ 1.71
EPHB4-205ENST00000478459 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
EPHB4-205ENST00000478459 NFATC2IPQ8NCF5 419 aa25.73■■□□□ 1.71
EPHB4-205ENST00000478459 SLC4A9Q96Q91 983 aa25.73■■□□□ 1.71
EPHB4-205ENST00000478459 NPC1L1Q9UHC9 1359 aa25.72■■□□□ 1.71
EPHB4-205ENST00000478459 DCAF8L1A6NGE4 600 aa25.72■■□□□ 1.71
EPHB4-205ENST00000478459 LGR6Q9HBX8 967 aa25.72■■□□□ 1.71
EPHB4-205ENST00000478459 COL24A1Q17RW2 1714 aa25.71■■□□□ 1.71
EPHB4-205ENST00000478459 PTCD1O75127 700 aaKnown RBP25.71■■□□□ 1.71
EPHB4-205ENST00000478459 GNPATO15228 680 aa25.7■■□□□ 1.7
EPHB4-205ENST00000478459 MTHFSDQ2M296 383 aaKnown RBP25.7■■□□□ 1.7
EPHB4-205ENST00000478459 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
EPHB4-205ENST00000478459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.69■■□□□ 1.7
EPHB4-205ENST00000478459 AKAP4Q5JQC9 854 aa25.68■■□□□ 1.7
EPHB4-205ENST00000478459 PELP1Q8IZL8 1130 aaKnown RBP25.67■■□□□ 1.7
EPHB4-205ENST00000478459 PPP2R1AP30153 589 aa25.66■■□□□ 1.7
EPHB4-205ENST00000478459 NLGN2Q8NFZ4 835 aa25.66■■□□□ 1.7
EPHB4-205ENST00000478459 COL5A3P25940 1745 aaPredicted RBP25.66■■□□□ 1.7
EPHB4-205ENST00000478459 RNMTO43148 476 aaKnown RBP25.64■■□□□ 1.7
EPHB4-205ENST00000478459 SLC39A6Q13433 755 aa25.64■■□□□ 1.7
EPHB4-205ENST00000478459 FLAD1Q8NFF5 587 aa25.64■■□□□ 1.7
EPHB4-205ENST00000478459 CFAP53Q96M91 514 aa25.63■■□□□ 1.69
EPHB4-205ENST00000478459 MYH14Q7Z406 1995 aaKnown RBP25.62■■□□□ 1.69
EPHB4-205ENST00000478459 YY1P25490 414 aa25.62■■□□□ 1.69
EPHB4-205ENST00000478459 TJP1Q07157 1748 aa25.61■■□□□ 1.69
EPHB4-205ENST00000478459 SLC52A2Q9HAB3 445 aa25.61■■□□□ 1.69
EPHB4-205ENST00000478459 SSFA2P28290 1259 aa25.6■■□□□ 1.69
EPHB4-205ENST00000478459 UTRNP46939 3433 aa25.6■■□□□ 1.69
EPHB4-205ENST00000478459 GOLGB1Q14789 3259 aaKnown RBP25.59■■□□□ 1.69
EPHB4-205ENST00000478459 PRKAR2BP31323 418 aa25.59■■□□□ 1.69
EPHB4-205ENST00000478459 PHACTR3Q96KR7 559 aa25.59■■□□□ 1.69
EPHB4-205ENST00000478459 WWC3Q9ULE0 1092 aa25.59■■□□□ 1.69
EPHB4-205ENST00000478459 GPR162Q16538 588 aa25.58■■□□□ 1.69
EPHB4-205ENST00000478459 RTCBQ9Y3I0 505 aaKnown RBP25.58■■□□□ 1.69
EPHB4-205ENST00000478459 U2AF1L5P0DN76 240 aaPredicted RBP25.57■■□□□ 1.68
EPHB4-205ENST00000478459 HMGB2P26583 209 aaKnown RBP25.57■■□□□ 1.68
EPHB4-205ENST00000478459 U2AF1Q01081 240 aaKnown RBP eCLIP25.57■■□□□ 1.68
EPHB4-205ENST00000478459 ZNF831Q5JPB2 1677 aa25.57■■□□□ 1.68
EPHB4-205ENST00000478459 TRAPPC3LQ5T215 181 aa25.56■■□□□ 1.68
EPHB4-205ENST00000478459 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
EPHB4-205ENST00000478459 DNAJC10Q8IXB1 793 aa25.55■■□□□ 1.68
EPHB4-205ENST00000478459 RSPH6AQ9H0K4 717 aa25.55■■□□□ 1.68
EPHB4-205ENST00000478459 CRKLP46109 303 aaKnown RBP25.54■■□□□ 1.68
EPHB4-205ENST00000478459 ARHGEF1Q92888 912 aaKnown RBP25.54■■□□□ 1.68
EPHB4-205ENST00000478459 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
EPHB4-205ENST00000478459 ADAMTS7Q9UKP4 1686 aa25.54■■□□□ 1.68
EPHB4-205ENST00000478459 C4AP0C0L4 1744 aa25.54■■□□□ 1.68
EPHB4-205ENST00000478459 MRC1P22897 1456 aa25.53■■□□□ 1.68
EPHB4-205ENST00000478459 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
EPHB4-205ENST00000478459 GNAT3A8MTJ3 354 aa25.52■■□□□ 1.68
EPHB4-205ENST00000478459 IL17REQ8NFR9 667 aa25.52■■□□□ 1.68
EPHB4-205ENST00000478459 CNTNAP4Q9C0A0 1308 aa25.52■■□□□ 1.68
EPHB4-205ENST00000478459 RPS6KA4O75676 772 aa25.51■■□□□ 1.67
EPHB4-205ENST00000478459 GAS2L2Q8NHY3 880 aa25.51■■□□□ 1.67
EPHB4-205ENST00000478459 MMP10P09238 476 aa25.5■■□□□ 1.67
EPHB4-205ENST00000478459 RFC4P35249 363 aa25.5■■□□□ 1.67
EPHB4-205ENST00000478459 RC3H1Q5TC82 1133 aaKnown RBP25.5■■□□□ 1.67
EPHB4-205ENST00000478459 KCPQ6ZWJ8 1503 aa25.5■■□□□ 1.67
EPHB4-205ENST00000478459 SRP68Q9UHB9 627 aaKnown RBP25.5■■□□□ 1.67
EPHB4-205ENST00000478459 TEFQ10587 303 aa25.49■■□□□ 1.67
EPHB4-205ENST00000478459 CHD4Q14839 1912 aa25.49■■□□□ 1.67
EPHB4-205ENST00000478459 SIPA1L3O60292 1781 aaPredicted RBP25.48■■□□□ 1.67
EPHB4-205ENST00000478459 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.672e-8■■■□□ 16.5
EPHB4-205ENST00000478459 INTS5Q6P9B9 1019 aaKnown RBP25.47■■□□□ 1.67
EPHB4-205ENST00000478459 UBR2Q8IWV8 1755 aa25.46■■□□□ 1.67
EPHB4-205ENST00000478459 DCTN1Q14203 1278 aa25.46■■□□□ 1.67
EPHB4-205ENST00000478459 CICQ96RK0 1608 aaPredicted RBP25.45■■□□□ 1.67
EPHB4-205ENST00000478459 GYS1P13807 737 aa25.45■■□□□ 1.66
EPHB4-205ENST00000478459 MCM10Q7L590 875 aa25.45■■□□□ 1.66
EPHB4-205ENST00000478459 TTC5Q8N0Z6 440 aa25.45■■□□□ 1.66
EPHB4-205ENST00000478459 CCDC87Q9NVE4 849 aa25.45■■□□□ 1.66
EPHB4-205ENST00000478459 KCNQ3O43525 872 aa25.44■■□□□ 1.66
EPHB4-205ENST00000478459 CD2APQ9Y5K6 639 aa25.44■■□□□ 1.66
EPHB4-205ENST00000478459 CYP19A1P11511 503 aaPredicted RBP25.43■■□□□ 1.66
EPHB4-205ENST00000478459 N4BP2Q86UW6 1770 aaPredicted RBP25.43■■□□□ 1.66
EPHB4-205ENST00000478459 ZNF496Q96IT1 587 aaPredicted RBP25.42■■□□□ 1.66
EPHB4-205ENST00000478459 ZBTB1Q9Y2K1 713 aa25.42■■□□□ 1.66
EPHB4-205ENST00000478459 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
EPHB4-205ENST00000478459 FCHSD2O94868 740 aa25.41■■□□□ 1.66
EPHB4-205ENST00000478459 ADRA2BP18089 450 aa25.41■■□□□ 1.66
EPHB4-205ENST00000478459 CANXP27824 592 aaKnown RBP25.41■■□□□ 1.66
EPHB4-205ENST00000478459 FKBP8Q14318 412 aa25.4■■□□□ 1.66
EPHB4-205ENST00000478459 ZNF790Q6PG37 636 aa25.4■■□□□ 1.66
EPHB4-205ENST00000478459 NLGN1Q8N2Q7 840 aa25.4■■□□□ 1.66
EPHB4-205ENST00000478459 BTBD11A6QL63 1104 aa25.39■■□□□ 1.66
EPHB4-205ENST00000478459 ZNF330Q9Y3S2 320 aaPredicted RBP25.39■■□□□ 1.66
EPHB4-205ENST00000478459 USPL1Q5W0Q7 1092 aa25.38■■□□□ 1.65
EPHB4-205ENST00000478459 RTF1Q92541 710 aaKnown RBP25.38■■□□□ 1.65
EPHB4-205ENST00000478459 SOS1Q07889 1333 aaPredicted RBP25.37■■□□□ 1.65
EPHB4-205ENST00000478459 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
EPHB4-205ENST00000478459 PARP3Q9Y6F1 533 aa25.37■■□□□ 1.65
EPHB4-205ENST00000478459 CEMIPQ8WUJ3 1361 aa25.36■■□□□ 1.65
EPHB4-205ENST00000478459 COL15A1P39059 1388 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 398.4 ms