RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 MYO15BQ96JP2 1530 aa10.63□□□□□ -0.71
ITGA4-209ENST00000478440 BACH1O14867 736 aa10.63□□□□□ -0.71
ITGA4-209ENST00000478440 GTF2IP78347 998 aa10.63□□□□□ -0.71
ITGA4-209ENST00000478440 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
ITGA4-209ENST00000478440 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
ITGA4-209ENST00000478440 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 PSME1Q06323 249 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 POU4F2Q12837 409 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 TLR1Q15399 786 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
ITGA4-209ENST00000478440 H7C1W4 665 aa10.61□□□□□ -0.71
ITGA4-209ENST00000478440 RHOQP17081 205 aa10.61□□□□□ -0.71
ITGA4-209ENST00000478440 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
ITGA4-209ENST00000478440 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
ITGA4-209ENST00000478440 TIMMDC1Q9NPL8 285 aa10.61□□□□□ -0.71
ITGA4-209ENST00000478440 PCDHGA11Q9Y5H2 935 aa10.61□□□□□ -0.71
ITGA4-209ENST00000478440 GMPRP36959 345 aa10.6□□□□□ -0.71
ITGA4-209ENST00000478440 SCNN1DP51172 638 aa10.6□□□□□ -0.71
ITGA4-209ENST00000478440 SV2AQ7L0J3 742 aa10.6□□□□□ -0.71
ITGA4-209ENST00000478440 DEPDC4Q8N2C3 294 aa10.6□□□□□ -0.71
ITGA4-209ENST00000478440 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
ITGA4-209ENST00000478440 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
ITGA4-209ENST00000478440 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
ITGA4-209ENST00000478440 SMTNP53814 917 aa10.59□□□□□ -0.71
ITGA4-209ENST00000478440 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
ITGA4-209ENST00000478440 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
ITGA4-209ENST00000478440 A0A1B0GTH6 734 aa10.58□□□□□ -0.72
ITGA4-209ENST00000478440 FOXR1Q6PIV2 292 aa10.58□□□□□ -0.72
ITGA4-209ENST00000478440 SLC4A9Q96Q91 983 aa10.58□□□□□ -0.72
ITGA4-209ENST00000478440 ZMYND15Q9H091 742 aa10.58□□□□□ -0.72
ITGA4-209ENST00000478440 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
ITGA4-209ENST00000478440 CDC14CA4D256 554 aa10.57□□□□□ -0.72
ITGA4-209ENST00000478440 KCTD17Q8N5Z5 321 aa10.57□□□□□ -0.72
ITGA4-209ENST00000478440 MKRN1Q9UHC7 482 aaKnown RBP10.57□□□□□ -0.72
ITGA4-209ENST00000478440 SCRIBQ14160 1630 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 PALM3A6NDB9 673 aaPredicted RBP10.56□□□□□ -0.72
ITGA4-209ENST00000478440 TMEM229AB2RXF0 380 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 F11P03951 625 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 RIPOR1Q6ZS17 1223 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 TRIM22Q8IYM9 498 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 LARGE2Q8N3Y3 721 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 GAS2L1Q99501 681 aaPredicted RBP10.56□□□□□ -0.72
ITGA4-209ENST00000478440 PPP1R12CQ9BZL4 782 aa10.56□□□□□ -0.72
ITGA4-209ENST00000478440 A6NJY4 79 aa10.55□□□□□ -0.72
ITGA4-209ENST00000478440 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
ITGA4-209ENST00000478440 VWA5B2Q8N398 1253 aa10.55□□□□□ -0.72
ITGA4-209ENST00000478440 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
ITGA4-209ENST00000478440 DNAAF2Q9NVR5 837 aaKnown RBP10.55□□□□□ -0.72
ITGA4-209ENST00000478440 SERTAD1Q9UHV2 236 aa10.55□□□□□ -0.72
ITGA4-209ENST00000478440 ZNF777Q9ULD5 760 aaPredicted RBP10.55□□□□□ -0.72
ITGA4-209ENST00000478440 MAFBQ9Y5Q3 323 aaPredicted RBP10.55□□□□□ -0.72
ITGA4-209ENST00000478440 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
ITGA4-209ENST00000478440 MTFR1Q15390 333 aa10.54□□□□□ -0.72
ITGA4-209ENST00000478440 C4orf17Q53FE4 359 aa10.54□□□□□ -0.72
ITGA4-209ENST00000478440 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
ITGA4-209ENST00000478440 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
ITGA4-209ENST00000478440 CCDC102BQ68D86 513 aa10.53□□□□□ -0.72
ITGA4-209ENST00000478440 PGBD3Q8N328 593 aa10.53□□□□□ -0.72
ITGA4-209ENST00000478440 OGFOD1Q8N543 542 aa10.53□□□□□ -0.72
ITGA4-209ENST00000478440 C1orf216Q8TAB5 229 aa10.53□□□□□ -0.72
ITGA4-209ENST00000478440 PHKA2P46019 1235 aa10.52□□□□□ -0.73
ITGA4-209ENST00000478440 LBRQ14739 615 aaKnown RBP10.52□□□□□ -0.73
ITGA4-209ENST00000478440 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
ITGA4-209ENST00000478440 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
ITGA4-209ENST00000478440 CECR2Q9BXF3 1484 aa10.52□□□□□ -0.73
ITGA4-209ENST00000478440 SHROOM4Q9ULL8 1493 aa10.52□□□□□ -0.73
ITGA4-209ENST00000478440 M0R2N6 131 aa10.51□□□□□ -0.73
ITGA4-209ENST00000478440 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
ITGA4-209ENST00000478440 TRERF1Q96PN7 1200 aa10.51□□□□□ -0.73
ITGA4-209ENST00000478440 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
ITGA4-209ENST00000478440 RASA1P20936 1047 aa10.5□□□□□ -0.73
ITGA4-209ENST00000478440 NBPF1Q3BBV0 1214 aa10.5□□□□□ -0.73
ITGA4-209ENST00000478440 SIX5Q8N196 739 aa10.5□□□□□ -0.73
ITGA4-209ENST00000478440 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.5□□□□□ -0.73
ITGA4-209ENST00000478440 ZBTB7BO15156 539 aaPredicted RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 LMOD1P29536 600 aaPredicted RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 PLA2G4AP47712 749 aa10.49□□□□□ -0.73
ITGA4-209ENST00000478440 CLDN10P78369 228 aa10.49□□□□□ -0.73
ITGA4-209ENST00000478440 GPR161Q8N6U8 529 aaKnown RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 COL25A1Q9BXS0 654 aaPredicted RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
ITGA4-209ENST00000478440 SCHIP1Q9P0W5 487 aaPredicted RBP10.49□□□□□ -0.73
ITGA4-209ENST00000478440 KCNMA1Q12791 1236 aa10.48□□□□□ -0.73
ITGA4-209ENST00000478440 EFHC2Q5JST6 749 aa10.48□□□□□ -0.73
ITGA4-209ENST00000478440 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
ITGA4-209ENST00000478440 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
ITGA4-209ENST00000478440 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
ITGA4-209ENST00000478440 CHMP3Q9Y3E7 222 aa10.48□□□□□ -0.73
ITGA4-209ENST00000478440 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
ITGA4-209ENST00000478440 MSX1P28360 303 aa10.47□□□□□ -0.73
ITGA4-209ENST00000478440 DBN1Q16643 649 aa10.47□□□□□ -0.73
ITGA4-209ENST00000478440 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
ITGA4-209ENST00000478440 IQSEC3Q9UPP2 1182 aaPredicted RBP10.47□□□□□ -0.73
ITGA4-209ENST00000478440 PHF24Q9UPV7 400 aa10.47□□□□□ -0.73
ITGA4-209ENST00000478440 FAM196BA6NMK8 535 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms