RNA–Protein interactions for RNA: ENST00000477127.5

CCNL1-219, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-219ENST00000477127 NEFLP07196 543 aa18.35■□□□□ 0.53
CCNL1-219ENST00000477127 YBX3P16989 372 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCNL1-219ENST00000477127 SIK1P57059 783 aa18.35■□□□□ 0.53
CCNL1-219ENST00000477127 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
CCNL1-219ENST00000477127 TOGARAM1Q9Y4F4 1720 aa18.34■□□□□ 0.53
CCNL1-219ENST00000477127 PHKG2P15735 406 aa18.34■□□□□ 0.53
CCNL1-219ENST00000477127 ITGB4P16144 1822 aa18.33■□□□□ 0.53
CCNL1-219ENST00000477127 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.53
CCNL1-219ENST00000477127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.33■□□□□ 0.53
CCNL1-219ENST00000477127 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.53
CCNL1-219ENST00000477127 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
CCNL1-219ENST00000477127 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
CCNL1-219ENST00000477127 GOLGB1Q14789 3259 aaKnown RBP18.32■□□□□ 0.52
CCNL1-219ENST00000477127 PHF14O94880 888 aa18.32■□□□□ 0.52
CCNL1-219ENST00000477127 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
CCNL1-219ENST00000477127 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
CCNL1-219ENST00000477127 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
CCNL1-219ENST00000477127 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
CCNL1-219ENST00000477127 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
CCNL1-219ENST00000477127 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
CCNL1-219ENST00000477127 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
CCNL1-219ENST00000477127 TNNT2P45379 298 aaPredicted RBP18.29■□□□□ 0.52
CCNL1-219ENST00000477127 AMIGO3Q86WK7 504 aa18.29■□□□□ 0.52
CCNL1-219ENST00000477127 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
CCNL1-219ENST00000477127 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
CCNL1-219ENST00000477127 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
CCNL1-219ENST00000477127 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
CCNL1-219ENST00000477127 UBR3Q6ZT12 1888 aa18.27■□□□□ 0.52
CCNL1-219ENST00000477127 GNPATO15228 680 aa18.27■□□□□ 0.52
CCNL1-219ENST00000477127 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
CCNL1-219ENST00000477127 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.52
CCNL1-219ENST00000477127 ITPK1Q13572 414 aa18.26■□□□□ 0.51
CCNL1-219ENST00000477127 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
CCNL1-219ENST00000477127 PANK3Q9H999 370 aa18.26■□□□□ 0.51
CCNL1-219ENST00000477127 FKBP8Q14318 412 aa18.26■□□□□ 0.51
CCNL1-219ENST00000477127 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
CCNL1-219ENST00000477127 RC3H1Q5TC82 1133 aaKnown RBP18.25■□□□□ 0.51
CCNL1-219ENST00000477127 TRAPPC3LQ5T215 181 aa18.24■□□□□ 0.51
CCNL1-219ENST00000477127 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
CCNL1-219ENST00000477127 NLGN1Q8N2Q7 840 aa18.24■□□□□ 0.51
CCNL1-219ENST00000477127 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
CCNL1-219ENST00000477127 GPBP1L1Q9HC44 474 aaPredicted RBP18.23■□□□□ 0.51
CCNL1-219ENST00000477127 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
CCNL1-219ENST00000477127 KDRP35968 1356 aa18.23■□□□□ 0.51
CCNL1-219ENST00000477127 KCNA4P22459 653 aa18.22■□□□□ 0.51
CCNL1-219ENST00000477127 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
CCNL1-219ENST00000477127 ZNF831Q5JPB2 1677 aa18.22■□□□□ 0.51
CCNL1-219ENST00000477127 MMP10P09238 476 aa18.21■□□□□ 0.51
CCNL1-219ENST00000477127 CABP4P57796 275 aa18.21■□□□□ 0.51
CCNL1-219ENST00000477127 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
CCNL1-219ENST00000477127 MORC1Q86VD1 984 aa18.21■□□□□ 0.51
CCNL1-219ENST00000477127 TGFB2P61812 414 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 ADCY9O60503 1353 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 MTHFSP49914 203 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 KNSTRNQ9Y448 316 aa18.2■□□□□ 0.5
CCNL1-219ENST00000477127 RFC4P35249 363 aa18.19■□□□□ 0.5
CCNL1-219ENST00000477127 SLC4A9Q96Q91 983 aa18.19■□□□□ 0.5
CCNL1-219ENST00000477127 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
CCNL1-219ENST00000477127 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
CCNL1-219ENST00000477127 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
CCNL1-219ENST00000477127 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
CCNL1-219ENST00000477127 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
CCNL1-219ENST00000477127 GYS1P13807 737 aa18.14■□□□□ 0.5
CCNL1-219ENST00000477127 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.5
CCNL1-219ENST00000477127 NFATC2IPQ8NCF5 419 aa18.14■□□□□ 0.5
CCNL1-219ENST00000477127 WWC3Q9ULE0 1092 aa18.14■□□□□ 0.5
CCNL1-219ENST00000477127 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.5
CCNL1-219ENST00000477127 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
CCNL1-219ENST00000477127 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.49
CCNL1-219ENST00000477127 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
CCNL1-219ENST00000477127 IL13P35225 146 aa18.13■□□□□ 0.49
CCNL1-219ENST00000477127 ZNF526Q8TF50 670 aaPredicted RBP18.13■□□□□ 0.49
CCNL1-219ENST00000477127 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
CCNL1-219ENST00000477127 C10orf71Q711Q0 1435 aa18.12■□□□□ 0.49
CCNL1-219ENST00000477127 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
CCNL1-219ENST00000477127 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
CCNL1-219ENST00000477127 MAPK8IP2Q13387 824 aaPredicted RBP18.12■□□□□ 0.49
CCNL1-219ENST00000477127 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
CCNL1-219ENST00000477127 BCS1LQ9Y276 419 aa18.12■□□□□ 0.49
CCNL1-219ENST00000477127 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
CCNL1-219ENST00000477127 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
CCNL1-219ENST00000477127 CC2D1BQ5T0F9 858 aaKnown RBP18.1■□□□□ 0.49
CCNL1-219ENST00000477127 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
CCNL1-219ENST00000477127 HSPA6P17066 643 aa18.09■□□□□ 0.49
CCNL1-219ENST00000477127 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
CCNL1-219ENST00000477127 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
CCNL1-219ENST00000477127 SLC52A2Q9HAB3 445 aa18.08■□□□□ 0.49
CCNL1-219ENST00000477127 USP42Q9H9J4 1324 aaKnown RBP18.08■□□□□ 0.49
CCNL1-219ENST00000477127 FCHSD2O94868 740 aa18.07■□□□□ 0.48
CCNL1-219ENST00000477127 DPEP1P16444 411 aa18.07■□□□□ 0.48
CCNL1-219ENST00000477127 ARHGAP27Q6ZUM4 889 aa18.07■□□□□ 0.48
CCNL1-219ENST00000477127 KIF3CO14782 793 aa18.07■□□□□ 0.48
CCNL1-219ENST00000477127 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
CCNL1-219ENST00000477127 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
CCNL1-219ENST00000477127 KCNA3P22001 575 aa18.05■□□□□ 0.48
CCNL1-219ENST00000477127 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
CCNL1-219ENST00000477127 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms