RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 A0A1B0GTH6 734 aa11.75□□□□□ -0.53
NUP58-209ENST00000476553 GOLGA6L1Q8N7Z2 621 aa11.75□□□□□ -0.53
NUP58-209ENST00000476553 EDARADDQ8WWZ3 215 aa11.75□□□□□ -0.53
NUP58-209ENST00000476553 GPAMQ9HCL2 828 aa11.75□□□□□ -0.53
NUP58-209ENST00000476553 LBRQ14739 615 aaKnown RBP11.74□□□□□ -0.53
NUP58-209ENST00000476553 SLCO4C1Q6ZQN7 724 aa11.74□□□□□ -0.53
NUP58-209ENST00000476553 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
NUP58-209ENST00000476553 PCDHB11Q9Y5F2 797 aa11.74□□□□□ -0.53
NUP58-209ENST00000476553 IL2RAP01589 272 aa11.73□□□□□ -0.53
NUP58-209ENST00000476553 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
NUP58-209ENST00000476553 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
NUP58-209ENST00000476553 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
NUP58-209ENST00000476553 HRH3Q9Y5N1 445 aa11.73□□□□□ -0.53
NUP58-209ENST00000476553 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
NUP58-209ENST00000476553 SUV39H2Q9H5I1 410 aa11.72□□□□□ -0.53
NUP58-209ENST00000476553 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
NUP58-209ENST00000476553 GNRH1P01148 92 aa11.71□□□□□ -0.53
NUP58-209ENST00000476553 TMEM259Q4ZIN3 620 aa11.71□□□□□ -0.53
NUP58-209ENST00000476553 ATXN7L1Q9ULK2 861 aaPredicted RBP11.71□□□□□ -0.53
NUP58-209ENST00000476553 NR1H3Q13133 447 aa11.7□□□□□ -0.54
NUP58-209ENST00000476553 GRIN2CQ14957 1233 aa11.7□□□□□ -0.54
NUP58-209ENST00000476553 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
NUP58-209ENST00000476553 CENPCQ03188 943 aa11.69□□□□□ -0.54
NUP58-209ENST00000476553 FHDC1Q9C0D6 1143 aaPredicted RBP11.69□□□□□ -0.54
NUP58-209ENST00000476553 NDFIP2Q9NV92 336 aa11.69□□□□□ -0.54
NUP58-209ENST00000476553 C2CD2LO14523 706 aa11.68□□□□□ -0.54
NUP58-209ENST00000476553 GPR37L1O60883 481 aa11.68□□□□□ -0.54
NUP58-209ENST00000476553 GNB5O14775 395 aa11.67□□□□□ -0.54
NUP58-209ENST00000476553 PHKA2P46019 1235 aa11.67□□□□□ -0.54
NUP58-209ENST00000476553 ZSCAN10Q96SZ4 725 aaPredicted RBP11.67□□□□□ -0.54
NUP58-209ENST00000476553 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
NUP58-209ENST00000476553 C1QTNF9BB2RNN3 333 aa11.66□□□□□ -0.54
NUP58-209ENST00000476553 BMP4P12644 408 aa11.66□□□□□ -0.54
NUP58-209ENST00000476553 DGKGP49619 791 aa11.66□□□□□ -0.54
NUP58-209ENST00000476553 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
NUP58-209ENST00000476553 RUBCNLQ9H714 662 aa11.66□□□□□ -0.54
NUP58-209ENST00000476553 GGA1Q9UJY5 639 aa11.66□□□□□ -0.54
NUP58-209ENST00000476553 PIK3R2O00459 728 aa11.65□□□□□ -0.54
NUP58-209ENST00000476553 FGFR3P22607 806 aa11.65□□□□□ -0.54
NUP58-209ENST00000476553 ITGB7P26010 798 aa11.65□□□□□ -0.54
NUP58-209ENST00000476553 CD163Q86VB7 1156 aa11.65□□□□□ -0.54
NUP58-209ENST00000476553 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.54
NUP58-209ENST00000476553 PSMG3-AS1Q96PY0 264 aa11.65□□□□□ -0.54
NUP58-209ENST00000476553 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 EPXP11678 715 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 AMPD1P23109 780 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 MSX1P28360 303 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 GNASQ5JWF2 1037 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 PGBD3Q8N328 593 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 KRTAP9-2Q9BYQ4 174 aa11.64□□□□□ -0.55
NUP58-209ENST00000476553 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.63□□□□□ -0.55
NUP58-209ENST00000476553 CHRNA4P43681 627 aa11.63□□□□□ -0.55
NUP58-209ENST00000476553 EFHC2Q5JST6 749 aa11.63□□□□□ -0.55
NUP58-209ENST00000476553 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
NUP58-209ENST00000476553 BNIP3LO60238 219 aa11.62□□□□□ -0.55
NUP58-209ENST00000476553 CRISPLD1Q9H336 500 aa11.62□□□□□ -0.55
NUP58-209ENST00000476553 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
NUP58-209ENST00000476553 ARAFP10398 606 aa11.61□□□□□ -0.55
NUP58-209ENST00000476553 CTBSQ01459 385 aa11.61□□□□□ -0.55
NUP58-209ENST00000476553 BTBD6Q96KE9 485 aa11.61□□□□□ -0.55
NUP58-209ENST00000476553 TMEM214Q6NUQ4 689 aaKnown RBP11.6□□□□□ -0.55
NUP58-209ENST00000476553 RNF135Q8IUD6 432 aa11.6□□□□□ -0.55
NUP58-209ENST00000476553 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
NUP58-209ENST00000476553 CCDC85AQ96PX6 553 aaPredicted RBP11.6□□□□□ -0.55
NUP58-209ENST00000476553 NOP53Q9NZM5 478 aaKnown RBP11.6□□□□□ -0.55
NUP58-209ENST00000476553 SOCS7O14512 581 aa11.59□□□□□ -0.55
NUP58-209ENST00000476553 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
NUP58-209ENST00000476553 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
NUP58-209ENST00000476553 DNAAF2Q9NVR5 837 aaKnown RBP11.59□□□□□ -0.55
NUP58-209ENST00000476553 RHBDD1Q8TEB9 315 aa11.58□□□□□ -0.56
NUP58-209ENST00000476553 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
NUP58-209ENST00000476553 KRTAP9-6A0A140TA67 174 aa11.56□□□□□ -0.56
NUP58-209ENST00000476553 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
NUP58-209ENST00000476553 PPARGC1BQ86YN6 1023 aaKnown RBP11.56□□□□□ -0.56
NUP58-209ENST00000476553 NEURL1BA8MQ27 555 aa11.55□□□□□ -0.56
NUP58-209ENST00000476553 FIGNL1Q6PIW4 674 aa11.54□□□□□ -0.56
NUP58-209ENST00000476553 ATP4AP20648 1035 aa11.53□□□□□ -0.56
NUP58-209ENST00000476553 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
NUP58-209ENST00000476553 ETNK1Q9HBU6 452 aa11.53□□□□□ -0.56
NUP58-209ENST00000476553 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
NUP58-209ENST00000476553 HCN2Q9UL51 889 aa11.52□□□□□ -0.57
NUP58-209ENST00000476553 PCDHGC4Q9Y5F7 938 aa11.52□□□□□ -0.57
NUP58-209ENST00000476553 NDUFB9Q9Y6M9 179 aa11.52□□□□□ -0.57
NUP58-209ENST00000476553 TLR1Q15399 786 aa11.51□□□□□ -0.57
NUP58-209ENST00000476553 MTMR14Q8NCE2 650 aa11.51□□□□□ -0.57
NUP58-209ENST00000476553 ZCCHC2Q9C0B9 1178 aaKnown RBP11.51□□□□□ -0.57
NUP58-209ENST00000476553 STAU1O95793 577 aaKnown RBP11.5□□□□□ -0.57
NUP58-209ENST00000476553 ADH6P28332 368 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 FAM182BQ5T319 152 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 TBC1D9Q6ZT07 1266 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 NLRP8Q86W28 1048 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 C1orf216Q8TAB5 229 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 SEMA6BQ9H3T3 888 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 AVENQ9NQS1 362 aaPredicted RBP11.5□□□□□ -0.57
NUP58-209ENST00000476553 KLF15Q9UIH9 416 aa11.5□□□□□ -0.57
NUP58-209ENST00000476553 DOC2BQ14184 412 aa11.49□□□□□ -0.57
NUP58-209ENST00000476553 FCHSD1Q86WN1 690 aa11.49□□□□□ -0.57
NUP58-209ENST00000476553 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms