RNA–Protein interactions for RNA: ENST00000476038.5

LCLAT1-207, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-207ENST00000476038 PIGBQ92521 554 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 MMP10P09238 476 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 SMIM5Q71RC9 77 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
LCLAT1-207ENST00000476038 C4AP0C0L4 1744 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 ZNF831Q5JPB2 1677 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 TGFB2P61812 414 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 DNAJC5GQ8N7S2 189 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
LCLAT1-207ENST00000476038 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
LCLAT1-207ENST00000476038 C16orf71Q8IYS4 520 aaPredicted RBP13.49□□□□□ -0.25
LCLAT1-207ENST00000476038 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
LCLAT1-207ENST00000476038 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
LCLAT1-207ENST00000476038 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
LCLAT1-207ENST00000476038 TNRC6CQ9HCJ0 1690 aaKnown RBP13.49□□□□□ -0.25
LCLAT1-207ENST00000476038 ITPK1Q13572 414 aa13.48□□□□□ -0.25
LCLAT1-207ENST00000476038 ARHGAP27Q6ZUM4 889 aa13.48□□□□□ -0.25
LCLAT1-207ENST00000476038 NLGN1Q8N2Q7 840 aa13.48□□□□□ -0.25
LCLAT1-207ENST00000476038 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
LCLAT1-207ENST00000476038 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
LCLAT1-207ENST00000476038 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
LCLAT1-207ENST00000476038 KDRP35968 1356 aa13.47□□□□□ -0.25
LCLAT1-207ENST00000476038 A0A0G2JLW4 131 aa13.47□□□□□ -0.25
LCLAT1-207ENST00000476038 FCHSD2O94868 740 aa13.47□□□□□ -0.25
LCLAT1-207ENST00000476038 TMF1P82094 1093 aa13.47□□□□□ -0.25
LCLAT1-207ENST00000476038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
LCLAT1-207ENST00000476038 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
LCLAT1-207ENST00000476038 FSTL1Q12841 308 aa13.46□□□□□ -0.25
LCLAT1-207ENST00000476038 TRAPPC3LQ5T215 181 aa13.46□□□□□ -0.25
LCLAT1-207ENST00000476038 KLRG1Q96E93 195 aa13.46□□□□□ -0.25
LCLAT1-207ENST00000476038 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
LCLAT1-207ENST00000476038 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
LCLAT1-207ENST00000476038 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
LCLAT1-207ENST00000476038 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
LCLAT1-207ENST00000476038 PPM1GO15355 546 aaPredicted RBP13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 PHKG2P15735 406 aa13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 DPEP1P16444 411 aa13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 C9orf131Q5VYM1 1079 aa13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 KCPQ6ZWJ8 1503 aa13.44□□□□□ -0.26
LCLAT1-207ENST00000476038 RFC4P35249 363 aa13.43□□□□□ -0.26
LCLAT1-207ENST00000476038 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
LCLAT1-207ENST00000476038 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 GYS1P13807 737 aa13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 COL13A1Q5TAT6 717 aaPredicted RBP13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 SBF1O95248 1867 aa13.42□□□□□ -0.26
LCLAT1-207ENST00000476038 RPS6KA4O75676 772 aa13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 HTRA3P83110 453 aa13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 TNS4Q8IZW8 715 aa13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 EYA1Q99502 592 aa13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 RNF181Q9P0P0 153 aa13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 PIM2Q9P1W9 311 aa13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
LCLAT1-207ENST00000476038 CAPN15O75808 1086 aa13.4□□□□□ -0.26
LCLAT1-207ENST00000476038 DCAF5Q96JK2 942 aa13.4□□□□□ -0.26
LCLAT1-207ENST00000476038 ERVV-2B6SEH9 535 aa13.39□□□□□ -0.27
LCLAT1-207ENST00000476038 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
LCLAT1-207ENST00000476038 KCNA3P22001 575 aa13.39□□□□□ -0.27
LCLAT1-207ENST00000476038 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
LCLAT1-207ENST00000476038 SMC1BQ8NDV3 1235 aa13.39□□□□□ -0.27
LCLAT1-207ENST00000476038 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
LCLAT1-207ENST00000476038 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
LCLAT1-207ENST00000476038 ZC3H4Q9UPT8 1303 aaKnown RBP13.38□□□□□ -0.27
LCLAT1-207ENST00000476038 TJP1Q07157 1748 aa13.37□□□□□ -0.27
LCLAT1-207ENST00000476038 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
LCLAT1-207ENST00000476038 PRELPP51888 382 aa13.37□□□□□ -0.27
LCLAT1-207ENST00000476038 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
LCLAT1-207ENST00000476038 RRAGCQ9HB90 399 aa13.37□□□□□ -0.27
LCLAT1-207ENST00000476038 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
LCLAT1-207ENST00000476038 DLEC1Q9Y238 1755 aa13.35□□□□□ -0.27
LCLAT1-207ENST00000476038 CABP4P57796 275 aa13.35□□□□□ -0.27
LCLAT1-207ENST00000476038 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
LCLAT1-207ENST00000476038 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
LCLAT1-207ENST00000476038 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
LCLAT1-207ENST00000476038 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
LCLAT1-207ENST00000476038 DDR1Q08345 913 aa13.34□□□□□ -0.27
LCLAT1-207ENST00000476038 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
LCLAT1-207ENST00000476038 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
LCLAT1-207ENST00000476038 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
LCLAT1-207ENST00000476038 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
LCLAT1-207ENST00000476038 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
LCLAT1-207ENST00000476038 CHRNA5P30532 468 aa13.33□□□□□ -0.28
LCLAT1-207ENST00000476038 FKBP8Q14318 412 aa13.33□□□□□ -0.28
LCLAT1-207ENST00000476038 AFDNP55196 1824 aaKnown RBP13.33□□□□□ -0.28
LCLAT1-207ENST00000476038 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
LCLAT1-207ENST00000476038 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms