RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 KDM2BQ8NHM5 1336 aa19.63■□□□□ 0.73
FAM3A-218ENST00000475657 SLC24A1O60721 1099 aa19.63■□□□□ 0.73
FAM3A-218ENST00000475657 HSP90AB2PQ58FF8 381 aa19.63■□□□□ 0.73
FAM3A-218ENST00000475657 C9orf131Q5VYM1 1079 aa19.63■□□□□ 0.73
FAM3A-218ENST00000475657 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
FAM3A-218ENST00000475657 FYB1O15117 783 aa19.62■□□□□ 0.73
FAM3A-218ENST00000475657 FCHSD2O94868 740 aa19.62■□□□□ 0.73
FAM3A-218ENST00000475657 TMF1P82094 1093 aa19.62■□□□□ 0.73
FAM3A-218ENST00000475657 ITPK1Q13572 414 aa19.62■□□□□ 0.73
FAM3A-218ENST00000475657 ITGB4P16144 1822 aa19.62■□□□□ 0.73
FAM3A-218ENST00000475657 DPEP1P16444 411 aa19.61■□□□□ 0.73
FAM3A-218ENST00000475657 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
FAM3A-218ENST00000475657 FLT4P35916 1363 aa19.6■□□□□ 0.73
FAM3A-218ENST00000475657 ATP6V1AP38606 617 aa19.6■□□□□ 0.73
FAM3A-218ENST00000475657 TRAPPC3LQ5T215 181 aa19.6■□□□□ 0.73
FAM3A-218ENST00000475657 ADRA2BP18089 450 aa19.59■□□□□ 0.73
FAM3A-218ENST00000475657 TESK2Q96S53 571 aa19.59■□□□□ 0.73
FAM3A-218ENST00000475657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.59■□□□□ 0.73
FAM3A-218ENST00000475657 TMOD3Q9NYL9 352 aa19.59■□□□□ 0.73
FAM3A-218ENST00000475657 ASAP1Q9ULH1 1129 aa19.59■□□□□ 0.73
FAM3A-218ENST00000475657 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
FAM3A-218ENST00000475657 RTCBQ9Y3I0 505 aaKnown RBP19.59■□□□□ 0.73
FAM3A-218ENST00000475657 KCNA3P22001 575 aa19.58■□□□□ 0.72
FAM3A-218ENST00000475657 NCAPD2Q15021 1401 aa19.58■□□□□ 0.72
FAM3A-218ENST00000475657 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
FAM3A-218ENST00000475657 SMC1BQ8NDV3 1235 aa19.57■□□□□ 0.72
FAM3A-218ENST00000475657 DCAF5Q96JK2 942 aa19.57■□□□□ 0.72
FAM3A-218ENST00000475657 GGNBP2Q9H3C7 697 aa19.57■□□□□ 0.72
FAM3A-218ENST00000475657 PIM2Q9P1W9 311 aa19.57■□□□□ 0.72
FAM3A-218ENST00000475657 PKD1L3Q7Z443 1732 aa19.56■□□□□ 0.72
FAM3A-218ENST00000475657 RC3H1Q5TC82 1133 aaKnown RBP19.56■□□□□ 0.72
FAM3A-218ENST00000475657 ATG3Q9NT62 314 aa19.56■□□□□ 0.72
FAM3A-218ENST00000475657 GYS1P13807 737 aa19.55■□□□□ 0.72
FAM3A-218ENST00000475657 RRAGCQ9HB90 399 aa19.55■□□□□ 0.72
FAM3A-218ENST00000475657 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
FAM3A-218ENST00000475657 KCPQ6ZWJ8 1503 aa19.55■□□□□ 0.72
FAM3A-218ENST00000475657 ARHGEF1Q92888 912 aaKnown RBP19.54■□□□□ 0.72
FAM3A-218ENST00000475657 BRCA1P38398 1863 aaKnown RBP19.54■□□□□ 0.72
FAM3A-218ENST00000475657 DALRD3Q5D0E6 543 aaKnown RBP19.53■□□□□ 0.72
FAM3A-218ENST00000475657 RNF181Q9P0P0 153 aa19.53■□□□□ 0.72
FAM3A-218ENST00000475657 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
FAM3A-218ENST00000475657 ZC3H4Q9UPT8 1303 aaKnown RBP19.52■□□□□ 0.72
FAM3A-218ENST00000475657 C4AP0C0L4 1744 aa19.52■□□□□ 0.72
FAM3A-218ENST00000475657 HSPA1AP0DMV8 641 aaKnown RBP19.52■□□□□ 0.72
FAM3A-218ENST00000475657 HSPA1BP0DMV9 641 aaKnown RBP19.52■□□□□ 0.72
FAM3A-218ENST00000475657 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
FAM3A-218ENST00000475657 ARFGEF1Q9Y6D6 1849 aa19.52■□□□□ 0.72
FAM3A-218ENST00000475657 KDRP35968 1356 aa19.52■□□□□ 0.72
FAM3A-218ENST00000475657 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
FAM3A-218ENST00000475657 RPS6KA4O75676 772 aa19.51■□□□□ 0.71
FAM3A-218ENST00000475657 PHKG2P15735 406 aa19.51■□□□□ 0.71
FAM3A-218ENST00000475657 RFC4P35249 363 aa19.51■□□□□ 0.71
FAM3A-218ENST00000475657 ST20-MTHFSA0A0A6YYL1 179 aa19.5■□□□□ 0.71
FAM3A-218ENST00000475657 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
FAM3A-218ENST00000475657 ZNF831Q5JPB2 1677 aa19.49■□□□□ 0.71
FAM3A-218ENST00000475657 TNRC6CQ9HCJ0 1690 aaKnown RBP19.49■□□□□ 0.71
FAM3A-218ENST00000475657 VEGFAP15692 232 aaPredicted RBP19.47■□□□□ 0.71
FAM3A-218ENST00000475657 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
FAM3A-218ENST00000475657 EYA1Q99502 592 aa19.46■□□□□ 0.71
FAM3A-218ENST00000475657 EMILIN1Q9Y6C2 1016 aa19.46■□□□□ 0.71
FAM3A-218ENST00000475657 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
FAM3A-218ENST00000475657 KDM6AO15550 1401 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-218ENST00000475657 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
FAM3A-218ENST00000475657 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
FAM3A-218ENST00000475657 SBF1O95248 1867 aa19.42■□□□□ 0.7
FAM3A-218ENST00000475657 DDR1Q08345 913 aa19.42■□□□□ 0.7
FAM3A-218ENST00000475657 SLC34A2O95436 690 aa19.41■□□□□ 0.7
FAM3A-218ENST00000475657 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
FAM3A-218ENST00000475657 LMNB1P20700 586 aa19.41■□□□□ 0.7
FAM3A-218ENST00000475657 CHRNA5P30532 468 aa19.41■□□□□ 0.7
FAM3A-218ENST00000475657 FKBP8Q14318 412 aa19.41■□□□□ 0.7
FAM3A-218ENST00000475657 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
FAM3A-218ENST00000475657 COL5A3P25940 1745 aaPredicted RBP19.39■□□□□ 0.7
FAM3A-218ENST00000475657 PPM1GO15355 546 aaPredicted RBP19.39■□□□□ 0.69
FAM3A-218ENST00000475657 TM4SF1P30408 202 aa19.39■□□□□ 0.69
FAM3A-218ENST00000475657 POLRMTO00411 1230 aaKnown RBP19.38■□□□□ 0.69
FAM3A-218ENST00000475657 MYH14Q7Z406 1995 aaKnown RBP19.38■□□□□ 0.69
FAM3A-218ENST00000475657 SRP68Q9UHB9 627 aaKnown RBP19.38■□□□□ 0.69
FAM3A-218ENST00000475657 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
FAM3A-218ENST00000475657 CDCA8Q53HL2 280 aa19.37■□□□□ 0.69
FAM3A-218ENST00000475657 CARD14Q9BXL6 1004 aa19.37■□□□□ 0.69
FAM3A-218ENST00000475657 CRKLP46109 303 aaKnown RBP19.36■□□□□ 0.69
FAM3A-218ENST00000475657 RASSF7Q02833 373 aa19.36■□□□□ 0.69
FAM3A-218ENST00000475657 ANKRD26Q9UPS8 1709 aa19.36■□□□□ 0.69
FAM3A-218ENST00000475657 PRDM10Q9NQV6 1147 aa19.35■□□□□ 0.69
FAM3A-218ENST00000475657 CREBZFQ9NS37 354 aa19.35■□□□□ 0.69
FAM3A-218ENST00000475657 POTECB2RU33 542 aa19.34■□□□□ 0.69
FAM3A-218ENST00000475657 CABP4P57796 275 aa19.34■□□□□ 0.69
FAM3A-218ENST00000475657 POLKQ9UBT6 870 aa19.34■□□□□ 0.69
FAM3A-218ENST00000475657 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
FAM3A-218ENST00000475657 EIF4A2Q14240 407 aaKnown RBP19.32■□□□□ 0.68
FAM3A-218ENST00000475657 PLEKHO1Q53GL0 409 aaPredicted RBP19.32■□□□□ 0.68
FAM3A-218ENST00000475657 DPY19L2Q6NUT2 758 aa19.32■□□□□ 0.68
FAM3A-218ENST00000475657 TTLL6Q8N841 843 aa19.32■□□□□ 0.68
FAM3A-218ENST00000475657 ZPR1O75312 459 aa19.31■□□□□ 0.68
FAM3A-218ENST00000475657 AMOTQ4VCS5 1084 aa19.31■□□□□ 0.68
FAM3A-218ENST00000475657 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
FAM3A-218ENST00000475657 NFKBIEO00221 500 aa19.29■□□□□ 0.68
FAM3A-218ENST00000475657 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
FAM3A-218ENST00000475657 FOXN1O15353 648 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms