RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 ATP1A2P50993 1020 aa8.29□□□□□ -1.08
SEC23IP-206ENST00000475542 TLR1Q15399 786 aa8.29□□□□□ -1.08
SEC23IP-206ENST00000475542 ERICH6Q7L0X2 663 aa8.29□□□□□ -1.08
SEC23IP-206ENST00000475542 ZSCAN10Q96SZ4 725 aaPredicted RBP8.29□□□□□ -1.08
SEC23IP-206ENST00000475542 VRTNQ9H8Y1 702 aa8.29□□□□□ -1.08
SEC23IP-206ENST00000475542 PHKA2P46019 1235 aa8.28□□□□□ -1.08
SEC23IP-206ENST00000475542 CRTC2Q53ET0 693 aaPredicted RBP8.28□□□□□ -1.08
SEC23IP-206ENST00000475542 CCDC82Q8N4S0 544 aa8.28□□□□□ -1.08
SEC23IP-206ENST00000475542 FHDC1Q9C0D6 1143 aaPredicted RBP8.28□□□□□ -1.08
SEC23IP-206ENST00000475542 ZNF358Q9NW07 568 aa8.28□□□□□ -1.08
SEC23IP-206ENST00000475542 NXF1Q9UBU9 619 aaKnown RBP8.28□□□□□ -1.08
SEC23IP-206ENST00000475542 TERTO14746 1132 aaKnown RBP8.27□□□□□ -1.09
SEC23IP-206ENST00000475542 SMTNP53814 917 aa8.27□□□□□ -1.09
SEC23IP-206ENST00000475542 TMEM214Q6NUQ4 689 aaKnown RBP8.27□□□□□ -1.09
SEC23IP-206ENST00000475542 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
SEC23IP-206ENST00000475542 LARGE2Q8N3Y3 721 aa8.27□□□□□ -1.09
SEC23IP-206ENST00000475542 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
SEC23IP-206ENST00000475542 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
SEC23IP-206ENST00000475542 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
SEC23IP-206ENST00000475542 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
SEC23IP-206ENST00000475542 WASLO00401 505 aaPredicted RBP8.26□□□□□ -1.09
SEC23IP-206ENST00000475542 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
SEC23IP-206ENST00000475542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 PPFIA3O75145 1194 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 PTK7Q13308 1070 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 NBPF10Q6P3W6 841 aaKnown RBP8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 TAS1R3Q7RTX0 852 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 TNS4Q8IZW8 715 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 NBPF15Q8N660 670 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 USP3Q9Y6I4 520 aa8.25□□□□□ -1.09
SEC23IP-206ENST00000475542 A6NJY4 79 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L21D6R901 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 BACH1O14867 736 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 LGR5O75473 907 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 DKK1O94907 266 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 GNASQ5JWF2 1037 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 SIX5Q8N196 739 aa8.24□□□□□ -1.09
SEC23IP-206ENST00000475542 WFS1O76024 890 aa8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 DPYDQ12882 1025 aa8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 TBCELQ5QJ74 424 aa8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 PPARGC1BQ86YN6 1023 aaKnown RBP8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 TSEN2Q8NCE0 465 aaKnown RBP8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
SEC23IP-206ENST00000475542 H3BM21 787 aa8.22□□□□□ -1.09
SEC23IP-206ENST00000475542 RHBDD1Q8TEB9 315 aa8.22□□□□□ -1.09
SEC23IP-206ENST00000475542 GAS2L1Q99501 681 aaPredicted RBP8.22□□□□□ -1.09
SEC23IP-206ENST00000475542 FAM196BA6NMK8 535 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 SEC13P55735 322 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 MTFR1Q15390 333 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 ANKMY2Q8IV38 441 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 ARID3AQ99856 593 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 CUEDC1Q9NWM3 386 aaPredicted RBP8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 IQSEC3Q9UPP2 1182 aaPredicted RBP8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
SEC23IP-206ENST00000475542 ITGA6P23229 1130 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 PLA2G4AP47712 749 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 EPHA4P54764 986 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 RIPOR1Q6ZS17 1223 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 SLC9A9Q8IVB4 645 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 NIFKQ9BYG3 293 aaKnown RBP8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 GPAMQ9HCL2 828 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 CABP1Q9NZU7 370 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 SCHIP1Q9P0W5 487 aaPredicted RBP8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 DYRK1BQ9Y463 629 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
SEC23IP-206ENST00000475542 WDR44Q5JSH3 913 aa8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 NPAS3Q8IXF0 933 aa8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 GAS2L2Q8NHY3 880 aa8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 AIDAQ96BJ3 306 aa8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 ARXQ96QS3 562 aa8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 HINFPQ9BQA5 517 aa8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 TSPAN10Q9H1Z9 355 aaPredicted RBP8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 NOVA2Q9UNW9 492 aaKnown RBP8.19□□□□□ -1.1
SEC23IP-206ENST00000475542 CDC14CA4D256 554 aa8.18□□□□□ -1.1
SEC23IP-206ENST00000475542 FOXK2Q01167 660 aa8.18□□□□□ -1.1
SEC23IP-206ENST00000475542 VWA5B2Q8N398 1253 aa8.18□□□□□ -1.1
SEC23IP-206ENST00000475542 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
SEC23IP-206ENST00000475542 MSX1P28360 303 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms