RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
SEC23IP-206ENST00000475542 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
SEC23IP-206ENST00000475542 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
SEC23IP-206ENST00000475542 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
SEC23IP-206ENST00000475542 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
SEC23IP-206ENST00000475542 FOXD1Q16676 465 aa18.22■□□□□ 0.51
SEC23IP-206ENST00000475542 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
SEC23IP-206ENST00000475542 ADRA2BP18089 450 aa17.53■□□□□ 0.4
SEC23IP-206ENST00000475542 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
SEC23IP-206ENST00000475542 MSH5O43196 834 aa16.75■□□□□ 0.27
SEC23IP-206ENST00000475542 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
SEC23IP-206ENST00000475542 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
SEC23IP-206ENST00000475542 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
SEC23IP-206ENST00000475542 KCNA4P22459 653 aa15.73■□□□□ 0.11
SEC23IP-206ENST00000475542 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
SEC23IP-206ENST00000475542 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
SEC23IP-206ENST00000475542 DMRT2Q9Y5R5 561 aa15.63■□□□□ 0.09
SEC23IP-206ENST00000475542 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
SEC23IP-206ENST00000475542 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
SEC23IP-206ENST00000475542 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
SEC23IP-206ENST00000475542 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
SEC23IP-206ENST00000475542 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
SEC23IP-206ENST00000475542 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
SEC23IP-206ENST00000475542 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
SEC23IP-206ENST00000475542 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
SEC23IP-206ENST00000475542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEC23IP-206ENST00000475542 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
SEC23IP-206ENST00000475542 ZBTB22O15209 634 aa14.48□□□□□ -0.09
SEC23IP-206ENST00000475542 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
SEC23IP-206ENST00000475542 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
SEC23IP-206ENST00000475542 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
SEC23IP-206ENST00000475542 U3KPZ7 1027 aaPredicted RBP14.36□□□□□ -0.11
SEC23IP-206ENST00000475542 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
SEC23IP-206ENST00000475542 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
SEC23IP-206ENST00000475542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
SEC23IP-206ENST00000475542 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
SEC23IP-206ENST00000475542 CACNB1Q02641 598 aaPredicted RBP14.07□□□□□ -0.16
SEC23IP-206ENST00000475542 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
SEC23IP-206ENST00000475542 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
SEC23IP-206ENST00000475542 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
SEC23IP-206ENST00000475542 CAPN15O75808 1086 aa13.94□□□□□ -0.18
SEC23IP-206ENST00000475542 APLP2Q06481 763 aa13.94□□□□□ -0.18
SEC23IP-206ENST00000475542 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
SEC23IP-206ENST00000475542 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
SEC23IP-206ENST00000475542 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
SEC23IP-206ENST00000475542 ABCB7O75027 752 aa13.7□□□□□ -0.22
SEC23IP-206ENST00000475542 DSG3P32926 999 aa13.68□□□□□ -0.22
SEC23IP-206ENST00000475542 POLA2Q14181 598 aa13.64□□□□□ -0.23
SEC23IP-206ENST00000475542 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
SEC23IP-206ENST00000475542 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
SEC23IP-206ENST00000475542 FBLN2P98095 1184 aa13.3□□□□□ -0.28
SEC23IP-206ENST00000475542 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
SEC23IP-206ENST00000475542 FKBP8Q14318 412 aa12.99□□□□□ -0.33
SEC23IP-206ENST00000475542 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
SEC23IP-206ENST00000475542 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
SEC23IP-206ENST00000475542 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
SEC23IP-206ENST00000475542 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
SEC23IP-206ENST00000475542 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
SEC23IP-206ENST00000475542 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
SEC23IP-206ENST00000475542 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
SEC23IP-206ENST00000475542 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
SEC23IP-206ENST00000475542 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEC23IP-206ENST00000475542 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
SEC23IP-206ENST00000475542 PROM2Q8N271 834 aa12.7□□□□□ -0.38
SEC23IP-206ENST00000475542 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
SEC23IP-206ENST00000475542 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
SEC23IP-206ENST00000475542 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
SEC23IP-206ENST00000475542 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
SEC23IP-206ENST00000475542 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
SEC23IP-206ENST00000475542 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
SEC23IP-206ENST00000475542 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
SEC23IP-206ENST00000475542 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.43
SEC23IP-206ENST00000475542 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
SEC23IP-206ENST00000475542 MIER1Q8N108 512 aa12.35□□□□□ -0.43
SEC23IP-206ENST00000475542 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
SEC23IP-206ENST00000475542 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
SEC23IP-206ENST00000475542 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
SEC23IP-206ENST00000475542 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
SEC23IP-206ENST00000475542 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
SEC23IP-206ENST00000475542 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
SEC23IP-206ENST00000475542 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
SEC23IP-206ENST00000475542 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
SEC23IP-206ENST00000475542 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
SEC23IP-206ENST00000475542 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
SEC23IP-206ENST00000475542 POTEHQ6S545 545 aa12.16□□□□□ -0.46
SEC23IP-206ENST00000475542 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
SEC23IP-206ENST00000475542 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEC23IP-206ENST00000475542 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
SEC23IP-206ENST00000475542 HAX1O00165 279 aa12□□□□□ -0.49
SEC23IP-206ENST00000475542 NUBP1P53384 320 aa12□□□□□ -0.49
SEC23IP-206ENST00000475542 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
SEC23IP-206ENST00000475542 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
SEC23IP-206ENST00000475542 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
SEC23IP-206ENST00000475542 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
SEC23IP-206ENST00000475542 EVX2Q03828 476 aa11.92□□□□□ -0.5
SEC23IP-206ENST00000475542 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
SEC23IP-206ENST00000475542 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
SEC23IP-206ENST00000475542 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
SEC23IP-206ENST00000475542 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
SEC23IP-206ENST00000475542 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms