RNA–Protein interactions for RNA: ENST00000474430.5

TRIM46-208, Transcript of tripartite motif containing 46, humanhuman

TSL 5

Gene TRIM46, Length 2,704 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-208ENST00000474430 DDX19BQ9UMR2 479 aa20.21■□□□□ 0.83
TRIM46-208ENST00000474430 SOS1Q07889 1333 aaPredicted RBP20.21■□□□□ 0.83
TRIM46-208ENST00000474430 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
TRIM46-208ENST00000474430 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
TRIM46-208ENST00000474430 WDR17Q8IZU2 1322 aa20.2■□□□□ 0.82
TRIM46-208ENST00000474430 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
TRIM46-208ENST00000474430 TEFQ10587 303 aa20.2■□□□□ 0.82
TRIM46-208ENST00000474430 ITPRIPQ8IWB1 547 aa20.19■□□□□ 0.82
TRIM46-208ENST00000474430 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
TRIM46-208ENST00000474430 API5Q9BZZ5 524 aaKnown RBP20.19■□□□□ 0.82
TRIM46-208ENST00000474430 TMEM57Q8N5G2 664 aa20.18■□□□□ 0.82
TRIM46-208ENST00000474430 MEGF6O75095 1541 aa20.18■□□□□ 0.82
TRIM46-208ENST00000474430 COL5A2P05997 1499 aaPredicted RBP20.18■□□□□ 0.82
TRIM46-208ENST00000474430 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
TRIM46-208ENST00000474430 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
TRIM46-208ENST00000474430 ABCC4O15439 1325 aa20.15■□□□□ 0.82
TRIM46-208ENST00000474430 HDAC1Q13547 482 aaPredicted RBP20.15■□□□□ 0.82
TRIM46-208ENST00000474430 CHMP4BQ9H444 224 aaKnown RBP20.15■□□□□ 0.82
TRIM46-208ENST00000474430 TOM1O60784 492 aa20.14■□□□□ 0.82
TRIM46-208ENST00000474430 BTBD11A6QL63 1104 aa20.14■□□□□ 0.81
TRIM46-208ENST00000474430 EVA1CP58658 441 aa20.14■□□□□ 0.81
TRIM46-208ENST00000474430 IFNL2Q8IZJ0 200 aa20.14■□□□□ 0.81
TRIM46-208ENST00000474430 PTPRCP08575 1304 aa20.13■□□□□ 0.81
TRIM46-208ENST00000474430 PHKG2P15735 406 aa20.13■□□□□ 0.81
TRIM46-208ENST00000474430 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
TRIM46-208ENST00000474430 CARD10Q9BWT7 1032 aa20.13■□□□□ 0.81
TRIM46-208ENST00000474430 COL22A1Q8NFW1 1626 aaPredicted RBP20.13■□□□□ 0.81
TRIM46-208ENST00000474430 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
TRIM46-208ENST00000474430 STK31Q9BXU1 1019 aa20.13■□□□□ 0.81
TRIM46-208ENST00000474430 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
TRIM46-208ENST00000474430 KDM3BQ7LBC6 1761 aa20.12■□□□□ 0.81
TRIM46-208ENST00000474430 PKD1L3Q7Z443 1732 aa20.12■□□□□ 0.81
TRIM46-208ENST00000474430 SLC4A3P48751 1232 aa20.11■□□□□ 0.81
TRIM46-208ENST00000474430 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
TRIM46-208ENST00000474430 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
TRIM46-208ENST00000474430 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
TRIM46-208ENST00000474430 HOXB7P09629 217 aa20.11■□□□□ 0.81
TRIM46-208ENST00000474430 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
TRIM46-208ENST00000474430 SEC24BO95487 1268 aa20.1■□□□□ 0.81
TRIM46-208ENST00000474430 PARP4Q9UKK3 1724 aaKnown RBP20.1■□□□□ 0.81
TRIM46-208ENST00000474430 ZBTB40Q9NUA8 1239 aa20.1■□□□□ 0.81
TRIM46-208ENST00000474430 PHLPP1O60346 1717 aa20.09■□□□□ 0.81
TRIM46-208ENST00000474430 NFKBIBQ15653 356 aa20.09■□□□□ 0.81
TRIM46-208ENST00000474430 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
TRIM46-208ENST00000474430 COL14A1Q05707 1796 aaKnown RBP20.08■□□□□ 0.81
TRIM46-208ENST00000474430 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.81
TRIM46-208ENST00000474430 DCAF5Q96JK2 942 aa20.08■□□□□ 0.81
TRIM46-208ENST00000474430 CYP27B1O15528 508 aa20.08■□□□□ 0.8
TRIM46-208ENST00000474430 IL2RBP14784 551 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 BTG4Q9NY30 223 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 SIPA1L3O60292 1781 aaPredicted RBP20.07■□□□□ 0.8
TRIM46-208ENST00000474430 SCN11AQ9UI33 1791 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 COL16A1Q07092 1604 aaPredicted RBP20.07■□□□□ 0.8
TRIM46-208ENST00000474430 SMC5Q8IY18 1101 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 ZCRB1Q8TBF4 217 aaKnown RBP20.07■□□□□ 0.8
TRIM46-208ENST00000474430 SLC52A2Q9HAB3 445 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 RGS12O14924 1447 aa20.07■□□□□ 0.8
TRIM46-208ENST00000474430 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
TRIM46-208ENST00000474430 KCNQ3O43525 872 aa20.06■□□□□ 0.8
TRIM46-208ENST00000474430 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
TRIM46-208ENST00000474430 INTS3Q68E01 1043 aaKnown RBP20.06■□□□□ 0.8
TRIM46-208ENST00000474430 PCDH11XQ9BZA7 1347 aa20.06■□□□□ 0.8
TRIM46-208ENST00000474430 PCDH11YQ9BZA8 1340 aa20.06■□□□□ 0.8
TRIM46-208ENST00000474430 G2E3Q7L622 706 aa20.04■□□□□ 0.8
TRIM46-208ENST00000474430 TBC1D32Q96NH3 1257 aa20.04■□□□□ 0.8
TRIM46-208ENST00000474430 CACNA1FO60840 1977 aa20.04■□□□□ 0.8
TRIM46-208ENST00000474430 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
TRIM46-208ENST00000474430 UPF2Q9HAU5 1272 aaKnown RBP20.04■□□□□ 0.8
TRIM46-208ENST00000474430 BECN1Q14457 450 aa20.04■□□□□ 0.8
TRIM46-208ENST00000474430 MRC1P22897 1456 aa20.03■□□□□ 0.8
TRIM46-208ENST00000474430 FLIIQ13045 1269 aa20.03■□□□□ 0.8
TRIM46-208ENST00000474430 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
TRIM46-208ENST00000474430 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
TRIM46-208ENST00000474430 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.79
TRIM46-208ENST00000474430 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.79
TRIM46-208ENST00000474430 ARXQ96QS3 562 aa20.01■□□□□ 0.79
TRIM46-208ENST00000474430 GIGYF1O75420 1035 aaPredicted RBP20■□□□□ 0.79
TRIM46-208ENST00000474430 ZNF790Q6PG37 636 aa20■□□□□ 0.79
TRIM46-208ENST00000474430 CCT4P50991 539 aaKnown RBP20■□□□□ 0.79
TRIM46-208ENST00000474430 FKBP5Q13451 457 aaPredicted RBP20■□□□□ 0.79
TRIM46-208ENST00000474430 CABP4P57796 275 aa19.99■□□□□ 0.79
TRIM46-208ENST00000474430 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
TRIM46-208ENST00000474430 NKX1-1Q15270 411 aaPredicted RBP19.98■□□□□ 0.79
TRIM46-208ENST00000474430 SLC39A6Q13433 755 aa19.97■□□□□ 0.79
TRIM46-208ENST00000474430 SLC4A10Q6U841 1118 aa19.97■□□□□ 0.79
TRIM46-208ENST00000474430 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
TRIM46-208ENST00000474430 CHPF2Q9P2E5 772 aa19.97■□□□□ 0.79
TRIM46-208ENST00000474430 ERVV-2B6SEH9 535 aa19.96■□□□□ 0.79
TRIM46-208ENST00000474430 F6X3S4 739 aa19.96■□□□□ 0.79
TRIM46-208ENST00000474430 ADAMTS2O95450 1211 aa19.96■□□□□ 0.79
TRIM46-208ENST00000474430 DBF4Q9UBU7 674 aaPredicted RBP19.96■□□□□ 0.79
TRIM46-208ENST00000474430 NUCB1Q02818 461 aa19.96■□□□□ 0.79
TRIM46-208ENST00000474430 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
TRIM46-208ENST00000474430 GSE1Q14687 1217 aa19.96■□□□□ 0.79
TRIM46-208ENST00000474430 C1orf115Q9H7X2 142 aa19.95■□□□□ 0.78
TRIM46-208ENST00000474430 PXDNLA1KZ92 1463 aa19.95■□□□□ 0.78
TRIM46-208ENST00000474430 PHAXQ9H814 394 aaKnown RBP19.95■□□□□ 0.78
TRIM46-208ENST00000474430 SHANK3Q9BYB0 1731 aa19.94■□□□□ 0.78
TRIM46-208ENST00000474430 DISP2A7MBM2 1401 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms