RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 PHKG2P15735 406 aa12.59□□□□□ -0.39
DUBR-203ENST00000473550 TEFQ10587 303 aa12.59□□□□□ -0.39
DUBR-203ENST00000473550 EXOC5O00471 708 aa12.58□□□□□ -0.4
DUBR-203ENST00000473550 CHL1O00533 1208 aa12.58□□□□□ -0.4
DUBR-203ENST00000473550 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
DUBR-203ENST00000473550 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
DUBR-203ENST00000473550 MCM10Q7L590 875 aa12.58□□□□□ -0.4
DUBR-203ENST00000473550 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
DUBR-203ENST00000473550 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
DUBR-203ENST00000473550 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
DUBR-203ENST00000473550 RNMTO43148 476 aaKnown RBP12.57□□□□□ -0.4
DUBR-203ENST00000473550 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
DUBR-203ENST00000473550 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
DUBR-203ENST00000473550 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
DUBR-203ENST00000473550 AFF2P51816 1311 aa12.57□□□□□ -0.4
DUBR-203ENST00000473550 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
DUBR-203ENST00000473550 SCN11AQ9UI33 1791 aa12.56□□□□□ -0.4
DUBR-203ENST00000473550 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
DUBR-203ENST00000473550 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
DUBR-203ENST00000473550 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
DUBR-203ENST00000473550 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
DUBR-203ENST00000473550 ATRNO75882 1429 aa12.55□□□□□ -0.4
DUBR-203ENST00000473550 MRC1P22897 1456 aa12.55□□□□□ -0.4
DUBR-203ENST00000473550 CYP27B1O15528 508 aa12.55□□□□□ -0.4
DUBR-203ENST00000473550 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
DUBR-203ENST00000473550 DDB1Q16531 1140 aa12.55□□□□□ -0.4
DUBR-203ENST00000473550 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
DUBR-203ENST00000473550 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.55□□□□□ -0.4
DUBR-203ENST00000473550 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
DUBR-203ENST00000473550 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
DUBR-203ENST00000473550 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
DUBR-203ENST00000473550 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
DUBR-203ENST00000473550 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
DUBR-203ENST00000473550 GJD4Q96KN9 370 aaPredicted RBP12.54□□□□□ -0.4
DUBR-203ENST00000473550 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
DUBR-203ENST00000473550 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
DUBR-203ENST00000473550 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
DUBR-203ENST00000473550 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
DUBR-203ENST00000473550 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
DUBR-203ENST00000473550 SLC52A2Q9HAB3 445 aa12.53□□□□□ -0.4
DUBR-203ENST00000473550 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
DUBR-203ENST00000473550 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
DUBR-203ENST00000473550 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
DUBR-203ENST00000473550 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
DUBR-203ENST00000473550 NEFLP07196 543 aa12.52□□□□□ -0.41
DUBR-203ENST00000473550 HOXB7P09629 217 aa12.52□□□□□ -0.41
DUBR-203ENST00000473550 EXOSC9Q06265 439 aaKnown RBP12.52□□□□□ -0.41
DUBR-203ENST00000473550 ALDH1L2Q3SY69 923 aa12.52□□□□□ -0.41
DUBR-203ENST00000473550 DDX54Q8TDD1 881 aaKnown RBP12.52□□□□□ -0.41
DUBR-203ENST00000473550 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.41
DUBR-203ENST00000473550 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
DUBR-203ENST00000473550 CABP4P57796 275 aa12.51□□□□□ -0.41
DUBR-203ENST00000473550 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
DUBR-203ENST00000473550 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
DUBR-203ENST00000473550 TWISTNBQ3B726 338 aaPredicted RBP12.5□□□□□ -0.41
DUBR-203ENST00000473550 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
DUBR-203ENST00000473550 GLI3P10071 1580 aa12.49□□□□□ -0.41
DUBR-203ENST00000473550 MS4A1P11836 297 aa12.49□□□□□ -0.41
DUBR-203ENST00000473550 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
DUBR-203ENST00000473550 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
DUBR-203ENST00000473550 BCL9O00512 1426 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 VAMP4O75379 141 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 RARSP54136 660 aaKnown RBP12.48□□□□□ -0.41
DUBR-203ENST00000473550 BRPF1P55201 1214 aaPredicted RBP12.48□□□□□ -0.41
DUBR-203ENST00000473550 ERICH6BQ5W0A0 696 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 TTC5Q8N0Z6 440 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 TMOD3Q9NYL9 352 aa12.48□□□□□ -0.41
DUBR-203ENST00000473550 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
DUBR-203ENST00000473550 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
DUBR-203ENST00000473550 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
DUBR-203ENST00000473550 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
DUBR-203ENST00000473550 A0A0G2JS52 829 aa12.46□□□□□ -0.41
DUBR-203ENST00000473550 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
DUBR-203ENST00000473550 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
DUBR-203ENST00000473550 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
DUBR-203ENST00000473550 MYT1Q01538 1121 aa12.46□□□□□ -0.41
DUBR-203ENST00000473550 CCDC30Q5VVM6 783 aa12.46□□□□□ -0.41
DUBR-203ENST00000473550 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
DUBR-203ENST00000473550 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
DUBR-203ENST00000473550 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
DUBR-203ENST00000473550 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
DUBR-203ENST00000473550 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
DUBR-203ENST00000473550 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
DUBR-203ENST00000473550 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
DUBR-203ENST00000473550 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
DUBR-203ENST00000473550 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
DUBR-203ENST00000473550 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
DUBR-203ENST00000473550 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
DUBR-203ENST00000473550 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
DUBR-203ENST00000473550 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
DUBR-203ENST00000473550 CANXP27824 592 aaKnown RBP12.43□□□□□ -0.42
DUBR-203ENST00000473550 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
DUBR-203ENST00000473550 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
DUBR-203ENST00000473550 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
DUBR-203ENST00000473550 ITGB4P16144 1822 aa12.43□□□□□ -0.42
DUBR-203ENST00000473550 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
DUBR-203ENST00000473550 CACNA1FO60840 1977 aa12.42□□□□□ -0.42
DUBR-203ENST00000473550 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms