RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
BRD3-205ENST00000473349 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
BRD3-205ENST00000473349 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
BRD3-205ENST00000473349 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
BRD3-205ENST00000473349 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
BRD3-205ENST00000473349 LINC00116Q8NCU8 138 aa13.06□□□□□ -0.32
BRD3-205ENST00000473349 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
BRD3-205ENST00000473349 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
BRD3-205ENST00000473349 PHKG2P15735 406 aa13.05□□□□□ -0.32
BRD3-205ENST00000473349 ITPK1Q13572 414 aa13.05□□□□□ -0.32
BRD3-205ENST00000473349 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
BRD3-205ENST00000473349 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
BRD3-205ENST00000473349 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
BRD3-205ENST00000473349 AK7Q96M32 723 aa13.04□□□□□ -0.32
BRD3-205ENST00000473349 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
BRD3-205ENST00000473349 SIK1P57059 783 aa13.03□□□□□ -0.32
BRD3-205ENST00000473349 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
BRD3-205ENST00000473349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
BRD3-205ENST00000473349 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
BRD3-205ENST00000473349 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.33
BRD3-205ENST00000473349 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
BRD3-205ENST00000473349 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.33
BRD3-205ENST00000473349 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.33
BRD3-205ENST00000473349 CHD4Q14839 1912 aa13.01□□□□□ -0.33
BRD3-205ENST00000473349 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
BRD3-205ENST00000473349 GNPATO15228 680 aa13□□□□□ -0.33
BRD3-205ENST00000473349 ATP6V1AP38606 617 aa13□□□□□ -0.33
BRD3-205ENST00000473349 MORC1Q86VD1 984 aa13□□□□□ -0.33
BRD3-205ENST00000473349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■■□□ 15
BRD3-205ENST00000473349 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
BRD3-205ENST00000473349 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
BRD3-205ENST00000473349 KDRP35968 1356 aa12.97□□□□□ -0.33
BRD3-205ENST00000473349 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
BRD3-205ENST00000473349 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
BRD3-205ENST00000473349 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
BRD3-205ENST00000473349 KIF7Q2M1P5 1343 aa12.96□□□□□ -0.33
BRD3-205ENST00000473349 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
BRD3-205ENST00000473349 SSFA2P28290 1259 aa12.95□□□□□ -0.34
BRD3-205ENST00000473349 IL13P35225 146 aa12.95□□□□□ -0.34
BRD3-205ENST00000473349 PLEKHO1Q53GL0 409 aaPredicted RBP12.95□□□□□ -0.34
BRD3-205ENST00000473349 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
BRD3-205ENST00000473349 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
BRD3-205ENST00000473349 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
BRD3-205ENST00000473349 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
BRD3-205ENST00000473349 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
BRD3-205ENST00000473349 MMP10P09238 476 aa12.94□□□□□ -0.34
BRD3-205ENST00000473349 CABP4P57796 275 aa12.94□□□□□ -0.34
BRD3-205ENST00000473349 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
BRD3-205ENST00000473349 POTEHQ6S545 545 aa12.94□□□□□ -0.34
BRD3-205ENST00000473349 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
BRD3-205ENST00000473349 MTHFSP49914 203 aa12.93□□□□□ -0.34
BRD3-205ENST00000473349 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
BRD3-205ENST00000473349 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
BRD3-205ENST00000473349 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
BRD3-205ENST00000473349 HMOX1P09601 288 aa12.92□□□□□ -0.34
BRD3-205ENST00000473349 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
BRD3-205ENST00000473349 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
BRD3-205ENST00000473349 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
BRD3-205ENST00000473349 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
BRD3-205ENST00000473349 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
BRD3-205ENST00000473349 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
BRD3-205ENST00000473349 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
BRD3-205ENST00000473349 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
BRD3-205ENST00000473349 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
BRD3-205ENST00000473349 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
BRD3-205ENST00000473349 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
BRD3-205ENST00000473349 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
BRD3-205ENST00000473349 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
BRD3-205ENST00000473349 MYH14Q7Z406 1995 aaKnown RBP12.9□□□□□ -0.34
BRD3-205ENST00000473349 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
BRD3-205ENST00000473349 TJP1Q07157 1748 aa12.89□□□□□ -0.35
BRD3-205ENST00000473349 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
BRD3-205ENST00000473349 PER1O15534 1290 aaPredicted RBP12.89□□□□□ -0.35
BRD3-205ENST00000473349 GYS1P13807 737 aa12.89□□□□□ -0.35
BRD3-205ENST00000473349 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
BRD3-205ENST00000473349 CEP350Q5VT06 3117 aa12.89□□□□□ -0.35
BRD3-205ENST00000473349 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
BRD3-205ENST00000473349 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
BRD3-205ENST00000473349 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
BRD3-205ENST00000473349 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
BRD3-205ENST00000473349 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
BRD3-205ENST00000473349 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
BRD3-205ENST00000473349 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
BRD3-205ENST00000473349 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
BRD3-205ENST00000473349 RFC4P35249 363 aa12.87□□□□□ -0.35
BRD3-205ENST00000473349 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
BRD3-205ENST00000473349 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
BRD3-205ENST00000473349 DNAJC10Q8IXB1 793 aa12.87□□□□□ -0.35
BRD3-205ENST00000473349 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
BRD3-205ENST00000473349 ADCY9O60503 1353 aa12.86□□□□□ -0.35
BRD3-205ENST00000473349 DPEP1P16444 411 aa12.86□□□□□ -0.35
BRD3-205ENST00000473349 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
BRD3-205ENST00000473349 FKBP8Q14318 412 aa12.86□□□□□ -0.35
BRD3-205ENST00000473349 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
BRD3-205ENST00000473349 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
BRD3-205ENST00000473349 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
BRD3-205ENST00000473349 DDR1Q08345 913 aa12.85□□□□□ -0.35
BRD3-205ENST00000473349 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
BRD3-205ENST00000473349 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
BRD3-205ENST00000473349 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms