RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
SMURF1-203ENST00000472627 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
SMURF1-203ENST00000472627 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
SMURF1-203ENST00000472627 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
SMURF1-203ENST00000472627 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
SMURF1-203ENST00000472627 ADRA2BP18089 450 aa19.48■□□□□ 0.71
SMURF1-203ENST00000472627 JMYQ8N9B5 988 aa19.48■□□□□ 0.71
SMURF1-203ENST00000472627 C10orf71Q711Q0 1435 aa19.48■□□□□ 0.71
SMURF1-203ENST00000472627 KIF13BQ9NQT8 1826 aa19.47■□□□□ 0.71
SMURF1-203ENST00000472627 TNS4Q8IZW8 715 aa19.47■□□□□ 0.71
SMURF1-203ENST00000472627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMURF1-203ENST00000472627 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
SMURF1-203ENST00000472627 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
SMURF1-203ENST00000472627 CAPN15O75808 1086 aa19.46■□□□□ 0.71
SMURF1-203ENST00000472627 C9orf131Q5VYM1 1079 aa19.46■□□□□ 0.71
SMURF1-203ENST00000472627 TESK2Q96S53 571 aa19.46■□□□□ 0.71
SMURF1-203ENST00000472627 ITPK1Q13572 414 aa19.45■□□□□ 0.7
SMURF1-203ENST00000472627 COL13A1Q5TAT6 717 aaPredicted RBP19.45■□□□□ 0.7
SMURF1-203ENST00000472627 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
SMURF1-203ENST00000472627 MAP2P11137 1827 aaKnown RBP19.45■□□□□ 0.7
SMURF1-203ENST00000472627 DPEP1P16444 411 aa19.44■□□□□ 0.7
SMURF1-203ENST00000472627 RFC4P35249 363 aa19.44■□□□□ 0.7
SMURF1-203ENST00000472627 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
SMURF1-203ENST00000472627 N4BP2Q86UW6 1770 aaPredicted RBP19.44■□□□□ 0.7
SMURF1-203ENST00000472627 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
SMURF1-203ENST00000472627 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
SMURF1-203ENST00000472627 PRELPP51888 382 aa19.42■□□□□ 0.7
SMURF1-203ENST00000472627 CDCA8Q53HL2 280 aa19.42■□□□□ 0.7
SMURF1-203ENST00000472627 SMC1BQ8NDV3 1235 aa19.42■□□□□ 0.7
SMURF1-203ENST00000472627 DALRD3Q5D0E6 543 aaKnown RBP19.41■□□□□ 0.7
SMURF1-203ENST00000472627 C4AP0C0L4 1744 aa19.41■□□□□ 0.7
SMURF1-203ENST00000472627 KIAA1551Q9HCM1 1747 aa19.41■□□□□ 0.7
SMURF1-203ENST00000472627 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
SMURF1-203ENST00000472627 NCAPD2Q15021 1401 aa19.41■□□□□ 0.7
SMURF1-203ENST00000472627 RC3H1Q5TC82 1133 aaKnown RBP19.4■□□□□ 0.7
SMURF1-203ENST00000472627 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
SMURF1-203ENST00000472627 RNF181Q9P0P0 153 aa19.4■□□□□ 0.7
SMURF1-203ENST00000472627 PHKG2P15735 406 aa19.39■□□□□ 0.69
SMURF1-203ENST00000472627 HTRA3P83110 453 aa19.39■□□□□ 0.69
SMURF1-203ENST00000472627 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
SMURF1-203ENST00000472627 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
SMURF1-203ENST00000472627 EMILIN1Q9Y6C2 1016 aa19.39■□□□□ 0.69
SMURF1-203ENST00000472627 CNTNAP4Q9C0A0 1308 aa19.39■□□□□ 0.69
SMURF1-203ENST00000472627 KCPQ6ZWJ8 1503 aa19.39■□□□□ 0.69
SMURF1-203ENST00000472627 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
SMURF1-203ENST00000472627 GYS1P13807 737 aa19.38■□□□□ 0.69
SMURF1-203ENST00000472627 TNRC6CQ9HCJ0 1690 aaKnown RBP19.37■□□□□ 0.69
SMURF1-203ENST00000472627 KDRP35968 1356 aa19.37■□□□□ 0.69
SMURF1-203ENST00000472627 ZC3H4Q9UPT8 1303 aaKnown RBP19.37■□□□□ 0.69
SMURF1-203ENST00000472627 DCAF5Q96JK2 942 aa19.37■□□□□ 0.69
SMURF1-203ENST00000472627 RRAGCQ9HB90 399 aa19.37■□□□□ 0.69
SMURF1-203ENST00000472627 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
SMURF1-203ENST00000472627 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
SMURF1-203ENST00000472627 RPS6KA4O75676 772 aa19.36■□□□□ 0.69
SMURF1-203ENST00000472627 BRCA1P38398 1863 aaKnown RBP19.35■□□□□ 0.69
SMURF1-203ENST00000472627 WASHC2AQ641Q2 1341 aa19.35■□□□□ 0.69
SMURF1-203ENST00000472627 ZNF831Q5JPB2 1677 aa19.35■□□□□ 0.69
SMURF1-203ENST00000472627 EYA1Q99502 592 aa19.34■□□□□ 0.69
SMURF1-203ENST00000472627 KCNA3P22001 575 aa19.33■□□□□ 0.68
SMURF1-203ENST00000472627 HSPA1AP0DMV8 641 aaKnown RBP19.3■□□□□ 0.68
SMURF1-203ENST00000472627 HSPA1BP0DMV9 641 aaKnown RBP19.3■□□□□ 0.68
SMURF1-203ENST00000472627 VEGFAP15692 232 aaPredicted RBP19.3■□□□□ 0.68
SMURF1-203ENST00000472627 CABP4P57796 275 aa19.3■□□□□ 0.68
SMURF1-203ENST00000472627 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
SMURF1-203ENST00000472627 COL5A3P25940 1745 aaPredicted RBP19.29■□□□□ 0.68
SMURF1-203ENST00000472627 PLEKHO1Q53GL0 409 aaPredicted RBP19.28■□□□□ 0.68
SMURF1-203ENST00000472627 SLC4A9Q96Q91 983 aa19.28■□□□□ 0.68
SMURF1-203ENST00000472627 USP42Q9H9J4 1324 aaKnown RBP19.27■□□□□ 0.68
SMURF1-203ENST00000472627 LMNB1P20700 586 aa19.27■□□□□ 0.68
SMURF1-203ENST00000472627 GLTPD2A6NH11 291 aa19.26■□□□□ 0.67
SMURF1-203ENST00000472627 CHRNA5P30532 468 aa19.26■□□□□ 0.67
SMURF1-203ENST00000472627 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
SMURF1-203ENST00000472627 FKBP8Q14318 412 aa19.26■□□□□ 0.67
SMURF1-203ENST00000472627 AMOTQ4VCS5 1084 aa19.26■□□□□ 0.67
SMURF1-203ENST00000472627 ZPR1O75312 459 aa19.25■□□□□ 0.67
SMURF1-203ENST00000472627 PTCD1O75127 700 aaKnown RBP19.24■□□□□ 0.67
SMURF1-203ENST00000472627 DDR1Q08345 913 aa19.24■□□□□ 0.67
SMURF1-203ENST00000472627 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
SMURF1-203ENST00000472627 CARD14Q9BXL6 1004 aa19.24■□□□□ 0.67
SMURF1-203ENST00000472627 SRP68Q9UHB9 627 aaKnown RBP19.24■□□□□ 0.67
SMURF1-203ENST00000472627 MTHFSP49914 203 aa19.23■□□□□ 0.67
SMURF1-203ENST00000472627 EIF4A2Q14240 407 aaKnown RBP19.23■□□□□ 0.67
SMURF1-203ENST00000472627 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
SMURF1-203ENST00000472627 POLKQ9UBT6 870 aa19.23■□□□□ 0.67
SMURF1-203ENST00000472627 PCNTO95613 3336 aa19.22■□□□□ 0.67
SMURF1-203ENST00000472627 POLRMTO00411 1230 aaKnown RBP19.22■□□□□ 0.67
SMURF1-203ENST00000472627 DPY19L2Q6NUT2 758 aa19.22■□□□□ 0.67
SMURF1-203ENST00000472627 KDM6AO15550 1401 aaPredicted RBP19.22■□□□□ 0.67
SMURF1-203ENST00000472627 SBF1O95248 1867 aa19.21■□□□□ 0.67
SMURF1-203ENST00000472627 RASSF7Q02833 373 aa19.21■□□□□ 0.67
SMURF1-203ENST00000472627 TM4SF1P30408 202 aa19.19■□□□□ 0.66
SMURF1-203ENST00000472627 TTLL6Q8N841 843 aa19.19■□□□□ 0.66
SMURF1-203ENST00000472627 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
SMURF1-203ENST00000472627 TNNT2P45379 298 aaPredicted RBP19.17■□□□□ 0.66
SMURF1-203ENST00000472627 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
SMURF1-203ENST00000472627 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
SMURF1-203ENST00000472627 H0YIN7 160 aa19.16■□□□□ 0.66
SMURF1-203ENST00000472627 CREBZFQ9NS37 354 aa19.16■□□□□ 0.66
SMURF1-203ENST00000472627 TIAM2Q8IVF5 1701 aa19.14■□□□□ 0.66
SMURF1-203ENST00000472627 INTS5Q6P9B9 1019 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms