RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 POLMQ9NP87 494 aaPredicted RBP8.82□□□□□ -1
CDHR3-208ENST00000471910 ZNF358Q9NW07 568 aa8.82□□□□□ -1
CDHR3-208ENST00000471910 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
CDHR3-208ENST00000471910 SFI1A8K8P3 1242 aa8.81□□□□□ -1
CDHR3-208ENST00000471910 TMEM229AB2RXF0 380 aa8.81□□□□□ -1
CDHR3-208ENST00000471910 BMP1P13497 986 aa8.81□□□□□ -1
CDHR3-208ENST00000471910 GPC1P35052 558 aa8.81□□□□□ -1
CDHR3-208ENST00000471910 HINFPQ9BQA5 517 aa8.81□□□□□ -1
CDHR3-208ENST00000471910 ATP13A2Q9NQ11 1180 aa8.81□□□□□ -1
CDHR3-208ENST00000471910 IL2RAP01589 272 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 SMTNP53814 917 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 CENPCQ03188 943 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 ARXQ96QS3 562 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 INSM2Q96T92 566 aaPredicted RBP8.8□□□□□ -1
CDHR3-208ENST00000471910 SENP2Q9HC62 589 aa8.8□□□□□ -1
CDHR3-208ENST00000471910 DKK1O94907 266 aa8.79□□□□□ -1
CDHR3-208ENST00000471910 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
CDHR3-208ENST00000471910 TLR1Q15399 786 aa8.79□□□□□ -1
CDHR3-208ENST00000471910 ZFP42Q96MM3 310 aa8.79□□□□□ -1
CDHR3-208ENST00000471910 TTLL8A6PVC2 850 aa8.78□□□□□ -1
CDHR3-208ENST00000471910 RNF144AP50876 292 aaPredicted RBP8.78□□□□□ -1
CDHR3-208ENST00000471910 SWI5Q1ZZU3 235 aa8.78□□□□□ -1
CDHR3-208ENST00000471910 KIFC2Q96AC6 838 aa8.78□□□□□ -1
CDHR3-208ENST00000471910 ZSCAN10Q96SZ4 725 aaPredicted RBP8.78□□□□□ -1
CDHR3-208ENST00000471910 ZMIZ1Q9ULJ6 1067 aa8.78□□□□□ -1
CDHR3-208ENST00000471910 USTQ9Y2C2 406 aa8.78□□□□□ -1
CDHR3-208ENST00000471910 A6NJY4 79 aa8.77□□□□□ -1.01
CDHR3-208ENST00000471910 CTSOP43234 321 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-208ENST00000471910 TMEM164Q5U3C3 297 aa8.77□□□□□ -1.01
CDHR3-208ENST00000471910 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
CDHR3-208ENST00000471910 STK32AQ8WU08 396 aa8.77□□□□□ -1.01
CDHR3-208ENST00000471910 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
CDHR3-208ENST00000471910 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
CDHR3-208ENST00000471910 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
CDHR3-208ENST00000471910 RETREG2Q8NC44 543 aa8.76□□□□□ -1.01
CDHR3-208ENST00000471910 TSEN2Q8NCE0 465 aaKnown RBP8.76□□□□□ -1.01
CDHR3-208ENST00000471910 DACH1Q9UI36 760 aa8.76□□□□□ -1.01
CDHR3-208ENST00000471910 HRH3Q9Y5N1 445 aa8.76□□□□□ -1.01
CDHR3-208ENST00000471910 MTFR1Q15390 333 aa8.75□□□□□ -1.01
CDHR3-208ENST00000471910 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
CDHR3-208ENST00000471910 TNS4Q8IZW8 715 aa8.75□□□□□ -1.01
CDHR3-208ENST00000471910 GRIP2Q9C0E4 1043 aa8.75□□□□□ -1.01
CDHR3-208ENST00000471910 CHMP3Q9Y3E7 222 aa8.75□□□□□ -1.01
CDHR3-208ENST00000471910 SOS2Q07890 1332 aaPredicted RBP8.75□□□□□ -1.01
CDHR3-208ENST00000471910 LYSMD3Q7Z3D4 306 aa8.74□□□□□ -1.01
CDHR3-208ENST00000471910 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
CDHR3-208ENST00000471910 FHDC1Q9C0D6 1143 aaPredicted RBP8.74□□□□□ -1.01
CDHR3-208ENST00000471910 FIGNL2A6NMB9 653 aa8.73□□□□□ -1.01
CDHR3-208ENST00000471910 MAN1A2O60476 641 aa8.73□□□□□ -1.01
CDHR3-208ENST00000471910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.01
CDHR3-208ENST00000471910 FOXD4L5Q5VV16 416 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-208ENST00000471910 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
CDHR3-208ENST00000471910 RNF217Q8TC41 542 aa8.73□□□□□ -1.01
CDHR3-208ENST00000471910 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
CDHR3-208ENST00000471910 SCHIP1Q9P0W5 487 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-208ENST00000471910 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
CDHR3-208ENST00000471910 PRICKLE2Q7Z3G6 844 aa8.72□□□□□ -1.01
CDHR3-208ENST00000471910 RHBDD1Q8TEB9 315 aa8.72□□□□□ -1.01
CDHR3-208ENST00000471910 NIFKQ9BYG3 293 aaKnown RBP8.72□□□□□ -1.01
CDHR3-208ENST00000471910 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
CDHR3-208ENST00000471910 GMPR2Q9P2T1 348 aaKnown RBP8.72□□□□□ -1.01
CDHR3-208ENST00000471910 PDIA4P13667 645 aaKnown RBP8.71□□□□□ -1.02
CDHR3-208ENST00000471910 EPHA4P54764 986 aa8.71□□□□□ -1.02
CDHR3-208ENST00000471910 FAM69CQ0P6D2 419 aa8.71□□□□□ -1.02
CDHR3-208ENST00000471910 B4GALNT3Q6L9W6 998 aa8.71□□□□□ -1.02
CDHR3-208ENST00000471910 SLC9A9Q8IVB4 645 aa8.71□□□□□ -1.02
CDHR3-208ENST00000471910 SCG3Q8WXD2 468 aaKnown RBP8.71□□□□□ -1.02
CDHR3-208ENST00000471910 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
CDHR3-208ENST00000471910 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.02
CDHR3-208ENST00000471910 SPATA31C2B4DYI2 1134 aa8.7□□□□□ -1.02
CDHR3-208ENST00000471910 C11orf95C9JLR9 678 aaPredicted RBP8.7□□□□□ -1.02
CDHR3-208ENST00000471910 IGFBP4P22692 258 aa8.7□□□□□ -1.02
CDHR3-208ENST00000471910 FOXK2Q01167 660 aa8.7□□□□□ -1.02
CDHR3-208ENST00000471910 TAS1R3Q7RTX0 852 aa8.7□□□□□ -1.02
CDHR3-208ENST00000471910 TSPAN10Q9H1Z9 355 aaPredicted RBP8.7□□□□□ -1.02
CDHR3-208ENST00000471910 PPP1R12BO60237 982 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-208ENST00000471910 PRMT3O60678 531 aa8.69□□□□□ -1.02
CDHR3-208ENST00000471910 LGR5O75473 907 aa8.69□□□□□ -1.02
CDHR3-208ENST00000471910 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
CDHR3-208ENST00000471910 POU4F2Q12837 409 aa8.69□□□□□ -1.02
CDHR3-208ENST00000471910 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
CDHR3-208ENST00000471910 CHMP7Q8WUX9 453 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-208ENST00000471910 VTI1AQ96AJ9 217 aa8.69□□□□□ -1.02
CDHR3-208ENST00000471910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDHR3-208ENST00000471910 ATP2B4P23634 1241 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 WEE1P30291 646 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 TEAD4Q15561 434 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 TBCELQ5QJ74 424 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
CDHR3-208ENST00000471910 PRIMPOLQ96LW4 560 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 ZNF232Q9UNY5 417 aa8.68□□□□□ -1.02
CDHR3-208ENST00000471910 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-208ENST00000471910 SERTM1A2A2V5 107 aa8.67□□□□□ -1.02
CDHR3-208ENST00000471910 FOXO3O43524 673 aa8.67□□□□□ -1.02
CDHR3-208ENST00000471910 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
CDHR3-208ENST00000471910 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms