RNA–Protein interactions for RNA: ENST00000471746.1

ATP11C-208, Transcript of ATPase phospholipid transporting 11C, human

TSL 5

Gene ATP11C, Length 897 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP11C-208	ENST00000471746	CCDC9	Q9Y3X0	531 aa	Known RBP	11.17	□□□□□ -0.62
ATP11C-208	ENST00000471746	SHANK3	Q9BYB0	1731 aa		11.17	□□□□□ -0.62
ATP11C-208	ENST00000471746	BLM	P54132	1417 aa	Predicted RBP	11.17	□□□□□ -0.62
ATP11C-208	ENST00000471746	SOCS7	O14512	581 aa		11.16	□□□□□ -0.62
ATP11C-208	ENST00000471746	ONECUT3	O60422	494 aa	Predicted RBP	11.16	□□□□□ -0.62
ATP11C-208	ENST00000471746	RRS1	Q15050	365 aa	Known RBP	11.16	□□□□□ -0.62
ATP11C-208	ENST00000471746	NSD2	O96028	1365 aa		11.16	□□□□□ -0.62
ATP11C-208	ENST00000471746	ERBB3	P21860	1342 aa		11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	WDR17	Q8IZU2	1322 aa		11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	DPYSL4	O14531	572 aa		11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	SEMA3E	O15041	775 aa		11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	PER1	O15534	1290 aa	Predicted RBP	11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	EVA1C	P58658	441 aa		11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	FAM98C	Q17RN3	349 aa	Known RBP	11.15	□□□□□ -0.62
ATP11C-208	ENST00000471746	RTL1	A6NKG5	1358 aa		11.15	□□□□□ -0.63
ATP11C-208	ENST00000471746	ZEB1	P37275	1124 aa	Predicted RBP	11.14	□□□□□ -0.63
ATP11C-208	ENST00000471746	OXER1	Q8TDS5	423 aa		11.14	□□□□□ -0.63
ATP11C-208	ENST00000471746	IP6K1	Q92551	441 aa		11.14	□□□□□ -0.63
ATP11C-208	ENST00000471746	TNS1	Q9HBL0	1735 aa	Known RBP	11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	DISP2	A7MBM2	1401 aa		11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	SMG6	Q86US8	1419 aa	Known RBP	11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	HOXC9	P31274	260 aa		11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	SEPT12	Q8IYM1	358 aa		11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	USP35	Q9P2H5	1018 aa		11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	KAT6B	Q8WYB5	2073 aa		11.13	□□□□□ -0.63
ATP11C-208	ENST00000471746	BARGIN	Q6ZT62	677 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	TOM1L2	Q6ZVM7	507 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	TCP11L2	Q8N4U5	519 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	ANKRD24	Q8TF21	1146 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	KNSTRN	Q9Y448	316 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	EMILIN1	Q9Y6C2	1016 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	FLT4	P35916	1363 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	KIF24	Q5T7B8	1368 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	RGPD1	P0DJD0	1748 aa		11.12	□□□□□ -0.63
ATP11C-208	ENST00000471746	TESPA1	A2RU30	521 aa	Predicted RBP	11.11	□□□□□ -0.63
ATP11C-208	ENST00000471746	AMPH	P49418	695 aa		11.11	□□□□□ -0.63
ATP11C-208	ENST00000471746	CARD10	Q9BWT7	1032 aa		11.11	□□□□□ -0.63
ATP11C-208	ENST00000471746	THRAP3	Q9Y2W1	955 aa	Known RBP	11.11	□□□□□ -0.63
ATP11C-208	ENST00000471746	PKD1L3	Q7Z443	1732 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	VIRMA	Q69YN4	1812 aa	Known RBP	11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	SLC34A2	O95436	690 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	PDIA6	Q15084	440 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	MAMSTR	Q6ZN01	415 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	SCUBE2	Q9NQ36	999 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	POLK	Q9UBT6	870 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	INSR	P06213	1382 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746	NPC1L1	Q9UHC9	1359 aa		11.1	□□□□□ -0.63
ATP11C-208	ENST00000471746		A0A0G2JS52	829 aa		11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	CSB-PGBD3	P0DP91	1061 aa		11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	TNNT2	P45379	298 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	MYT1	Q01538	1121 aa		11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	HSP90AB2P	Q58FF8	381 aa		11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	SLAIN1	Q8ND83	568 aa		11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	PTCD2	Q8WV60	388 aa	Known RBP	11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	LTV1	Q96GA3	475 aa	Predicted RBP	11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	NCAPD2	Q15021	1401 aa		11.09	□□□□□ -0.63
ATP11C-208	ENST00000471746	KRT27	Q7Z3Y8	459 aa		11.08	□□□□□ -0.64
ATP11C-208	ENST00000471746	TNS2	Q63HR2	1409 aa		11.08	□□□□□ -0.64
ATP11C-208	ENST00000471746	CC2D1B	Q5T0F9	858 aa	Known RBP	11.07	□□□□□ -0.64
ATP11C-208	ENST00000471746	FAM182B	Q5T319	152 aa		11.07	□□□□□ -0.64
ATP11C-208	ENST00000471746	MORC1	Q86VD1	984 aa		11.07	□□□□□ -0.64
ATP11C-208	ENST00000471746	OTUD5	Q96G74	571 aa		11.07	□□□□□ -0.64
ATP11C-208	ENST00000471746	NLRP2	Q9NX02	1062 aa		11.07	□□□□□ -0.64
ATP11C-208	ENST00000471746	MEGF6	O75095	1541 aa		11.07	□□□□□ -0.64
ATP11C-208	ENST00000471746	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.06	□□□□□ -0.64
ATP11C-208	ENST00000471746	PPM1G	O15355	546 aa	Predicted RBP	11.06	□□□□□ -0.64
ATP11C-208	ENST00000471746	HOXB3	P14651	431 aa	Predicted RBP	11.06	□□□□□ -0.64
ATP11C-208	ENST00000471746	MAP3K9	P80192	1104 aa		11.06	□□□□□ -0.64
ATP11C-208	ENST00000471746	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
ATP11C-208	ENST00000471746	DOT1L	Q8TEK3	1739 aa		11.06	□□□□□ -0.64
ATP11C-208	ENST00000471746	NHS	Q6T4R5	1651 aa		11.05	□□□□□ -0.64
ATP11C-208	ENST00000471746	ITGB4	P16144	1822 aa		11.05	□□□□□ -0.64
ATP11C-208	ENST00000471746	MLLT3	P42568	568 aa	Predicted RBP	11.05	□□□□□ -0.64
ATP11C-208	ENST00000471746	NBPF6	Q5VWK0	638 aa		11.05	□□□□□ -0.64
ATP11C-208	ENST00000471746	NBPF4	Q96M43	638 aa		11.05	□□□□□ -0.64
ATP11C-208	ENST00000471746	COL3A1	P02461	1466 aa	Predicted RBP	11.05	□□□□□ -0.64
ATP11C-208	ENST00000471746	TOGARAM1	Q9Y4F4	1720 aa		11.04	□□□□□ -0.64
ATP11C-208	ENST00000471746	PRKCSH	P14314	528 aa	Predicted RBP	11.04	□□□□□ -0.64
ATP11C-208	ENST00000471746	CNGB1	Q14028	1251 aa	Predicted RBP	11.04	□□□□□ -0.64
ATP11C-208	ENST00000471746	USHBP1	Q8N6Y0	703 aa		11.04	□□□□□ -0.64
ATP11C-208	ENST00000471746	BTAF1	O14981	1849 aa		11.04	□□□□□ -0.64
ATP11C-208	ENST00000471746	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	RGPD4	Q7Z3J3	1758 aa		11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	OVOS2	A0A0G2JMS6	1433 aa		11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	IL2RB	P14784	551 aa		11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	EIF4A2	Q14240	407 aa	Known RBP	11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	DDB1	Q16531	1140 aa		11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	LHX8	Q68G74	356 aa		11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	RREB1	Q92766	1687 aa		11.03	□□□□□ -0.64
ATP11C-208	ENST00000471746	DDX10	Q13206	875 aa	Known RBP	11.02	□□□□□ -0.65
ATP11C-208	ENST00000471746	MARCH10	Q8NA82	808 aa	Predicted RBP	11.02	□□□□□ -0.65
ATP11C-208	ENST00000471746	EYA1	Q99502	592 aa		11.02	□□□□□ -0.65
ATP11C-208	ENST00000471746	MTHFS	P49914	203 aa		11.01	□□□□□ -0.65
ATP11C-208	ENST00000471746	PDE3B	Q13370	1112 aa		11.01	□□□□□ -0.65
ATP11C-208	ENST00000471746	TPRN	Q4KMQ1	711 aa		11.01	□□□□□ -0.65
ATP11C-208	ENST00000471746	PCDHGA4	Q9Y5G9	962 aa		11.01	□□□□□ -0.65
ATP11C-208	ENST00000471746	IGSF1	Q8N6C5	1336 aa		11.01	□□□□□ -0.65
ATP11C-208	ENST00000471746	PARD3	Q8TEW0	1356 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms